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2000
Águas, H., Martins Fortunato R. E. "Role of ion bombardment on the properties of a-Si : H films." Vacuum. 60 (2000): 247-254. AbstractWebsite

In this work we present a study of influence of ion bombardment on the optical, electrical and compositional properties of the intrinsic amorphous silicon films deposited in a modified triode plasma-enhanced chemical vapour deposition (PECVD) reactor. The application of a DC voltage to a grid placed in front of the r.f. electrode allowed us to control the energy and polarity of the ions striking the substrate during film growth. The results show a variation by two orders of magnitude in the dark conductivity from 10-10 to 6.2 × 10-12 (Ω cm)-1, while the photosensitivity varied from 2 × 105 to 2 × 107. A process plasma that takes place in the γ-type regime was associated with the use of a negative bias, while a process plasma like the one of the α-type regime was associated with the use of a positive bias. The films deposited with a bias ≈ 38 V are highly intrinsic and the abrupt change in the conductivity properties observed at this bias is attributed to a change in the density of the states ascribed to the position of the Fermi level. That is, a precise control of the energy of the ions striking the substrate during the film growth leads to improved film optoelectronic properties, very important for device applications. © 2001 Elsevier Science Ltd. All rights reserved.

Martins, R.a, Ferreira Gonçalves Nunes Fortunato Marvão Martins J. a C. a. "Role of soldering parameters on the electrical performances presented by Cu-Sn-Cu joints used in power diodes." Materials Science and Engineering A. 288 (2000): 275-279. AbstractWebsite

The effects of Sn thickness electrodeposited over Cu on the structural and morphological performance of the joints formed were investigated. The electrical stability of the joints formed was analyzed under extreme aggressive conditions. Results indicated that the proposed soldering technology greatly satisfied the demands concerning soldering specifications.

Martins, R., Silva Ferreira Domingues Fortunato V. I. A. "Role of the gas temperature and power to gas flow ratio on powder and voids formation in films grown by PECVD technique." Vacuum. 56 (2000): 25-30. AbstractWebsite

This paper deals with the study of the role of gas temperature and of the ratio of r.f. power to gas flow on the particle’s formation in amorphous silicon films grown by plasma enhanced chemical vapour deposition technique, by monitoring the plasma impedance behaviour under different process conditions. The aim is to determine in which conditions the particles formed do not deteriorate the performances of the films grown or even can lead to an improvement of the properties of the films deposited. The results achieved show the existence of two main boundary regions (β- and θ-regions) separating the so-called α-regime (no powder formed) from the γ-regime (powder formed). Those regions are reached either by heating the gas, changing the gas pressure or using high power to gas flow ratios. In the β-region the probability of incorporating nanoparticles in the films is low and the films exhibit properties similar to those of the ones grown in the α-regime, with a low density of voids incorporated. In the θ-region small nanoparticles can be incorporated leading to films with density of states below 5×1015 cm-3, widened Urbach energies and photosensitivities about two orders of magnitude larger than that of conventional amorphous silicon grown in the α-regime. © 2000 Elsevier Science Ltd.

Martins, R., Silva Ferreira Domingues Fortunato V. I. A. "Role of the gas temperature and power to gas flow ratio on powder formation and properties of films grown by the PECVD technique." Materials Science and Engineering B: Solid-State Materials for Advanced Technology. 69 (2000): 272-277. AbstractWebsite

This paper deals with the study of the role of gas temperature and of the ratio of r.f. power to gas flow on the particle's formation in amorphous silicon films grown by the plasma enhanced chemical vapour deposition technique, by monitoring the plasma impedance behaviour under different process conditions. The results achieved show the existence of two main boundary regions separating the so-called α-regime (no powder formed) from the γ-regime (powder formed). Those regions are reached either by heating the gas, changing the gas pressure or using high power to gas flow ratios, corresponding to the establishment of a balance between the plasma resistance and the plasma reactance. In the β-region the probability to incorporate nanoparticles in the films is low and the films exhibit photosensitivity's of about 105 with density of states determined by the constant photocurrent method below 6×1015 cm-3 with Urbach energies below 50 meV. In the θ-region small nanoparticles can be incorporated leading to films with density of states below 3×1015 cm-3, with Urbach energies above 50 meV and photosensitivity's above 106, about two orders of magnitude larger than that of conventional amorphous silicon grown in the α-regime.

Marat-Mendes, R., C. J. Dias, and J. N. Marat-Mendes. "Smart mechanical transducers: A comparative study of piezoelectric materials." Fifth European Conference on Smart Structures and Materials. Eds. P. F. Gobin, and C. M. Friend. Vol. 4073. Proceedings of the Society of Photo-Optical Instrumentation Engineers (Spie), 4073. 2000. 332-340. Abstract
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Silva, R. J. C., FMB Fernandes, AJ Bottger, R. Delhez, and EJ Mittemeijer. "Stress state prediction applied to local composition changes." Ecrs 5: Proceedings of the Fifth European Conference on Residual Stresses. Vol. 347-3. 2000. 609-614. Abstract
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Aguas, H., V. Silva, I. Ferreira, E. Fortunato, and R. Martins. "Study of the effect of different plasma-enhanced chemical vapour deposition reactor configurations on the properties of hydrogenated amorphous silicon thin films." Philosophical Magazine B. 80.4 (2000): 475-486. Abstract
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Águas, H., Silva Ferreira Fortunato Martins V. I. E. "Study of the effect of different plasma-enhanced chemical vapour deposition reactor configurations on the properties of hydrogenated amorphous silicon thin films." Philosophical Magazine B: Physics of Condensed Matter; Statistical Mechanics, Electronic, Optical and Magnetic Properties. 80 (2000): 475-486. AbstractWebsite

In this work we present a study performed in a plasma-enhanced chemical vapour deposition reactor, where different rf electrode configurations were used with the aim of achieving conditions that lead to growth of highly uniform amorphous silicon films, with the required electronic quality, at high growth rates. This study consists in determining the plasma characteristics under different electrode configurations, in an argon plasma, using as diagnostic tools a Langmuir probe and impedance probe. These results were correlated with the hydrogenated amorphous silicon films produced, thereby allowing us to establish the best electrode configuration to grow electronic-grade-quality amorphous silicon films.

Águas, H., V. Silva, I. Ferreira, E. Fortunato, and R. Martins. "Study of the effect of different plasma-enhanced chemical vapour deposition reactor configurations on the properties of hydrogenated amorphous silicon thin films." Philosophical Magazine B. 80 (2000): 475-486. Abstract
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Cidade, M. T., C. R. Leal, M. H. Godinho, and Patrick Navard. "Temperature dependence of the rheological properties of acetoxypropylcellulose in the thermotropic chiral nematic phase." Molecular Crystals and Liquid Crystals. 348.1 (2000): 27-39. Abstract
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Mateus, O., and MT Antunes. "Torvosaurus sp.(Dinosauria : Theropoda) in the Late Jurassic of Portugal." Livro de Resumos do I Congresso Ibérico de Paleontologia. 2000. 115-117. Abstract
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Martins, R., A̧guas Ferreira Fortunato Guimares H. I. E. "Towards the improvement of the stability of a-Si:H pin devices." Solar Energy. 69 (2000): 257-262. AbstractWebsite

This paper deals with a new process to improve the stability of a-Si:H pin solar cells deposited in a single batch process by proper passivation of the interfaces. The process consists in removing partially a deposited sacrificial oxide layer grown between the p/i or i/n interfaces by SF6 etching. This layer is an absorber of defects and impurities that are introduced in the interfaces, mainly from the chamber walls and the substrate surface. The results achieved in laboratory samples lead to devices in which the fill factor and short circuit current density were improved respectively towards 75% and 16.5 mA cm-2, with a final working efficiency of about 9.5%. © 2001 Elsevier Science Ltd. All rights reserved.

Aguas, Hugo, Ana Cabrita, Pedro Tonello, Patricia Nunes, Elvira Fortunato, and Rodrigo Martins. "Two Step Process for the Growth of a Thin Layer of Silicon Dioxide for Tunneling Effect Applications." MRS Proceedings. Vol. 619. Cambridge University Press, 2000. 179. Abstract
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Águas, H., Cabrita Tonello Nunes Fortunato Martins A. P. P. "Two step process for the growth of a thin layer of silicon dioxide for tunnelling effect applications." Materials Research Society Symposium - Proceedings. Vol. 619. 2000. 179-184. Abstract

In today's main crystalline silicon (c-Si) applications in MOS (metal-oxide-silicon), MIS (metal-insulator-semiconductor) or SIS (Semiconductor-Insulator-Semiconductor), the growing of the oxide layer plays the main role, dictating the device performances, in particular if it has to be grown by a low temperature process. Of fundamental importance is the SiO2 interface with the c-Si. A very low defect density interface is desirable so that the number of trapping states can be reduced and the devices performance optimised. A two step low temperature oxidation process is proposed. The process consists of growing first a layer of oxide by a wet process and then treating the grown oxide with an oxygen plasma. The oxygen ions from the plasma bombard the oxide causing compaction of the oxide and a decrease in the interface roughness and defect density. Infrared spectroscopy and spectroscopic ellipsometry measurements were performed on the samples to determine the oxide thickness, optical and structural properties. SIS structures were built and capacitance measurements were performed under dark and illuminated conditions from which were inferred the interface defect density and correlated with the oxide growth process.

Prudencio, M., A. Pereira, P. Tavares, S. Besson, I. Cabrito, K. Brown, B. Samyn, B. Devreese, J. VanBeeumen, F. Rusnak, G. Fauque, J. Moura, M. Tegoni, C. Cambillau, and I. Moura. "{Purification, characterization, and preliminary crystallographic study of copper-containing nitrous oxide reductase from Pseudomonas nautica 617}." Biochemistry. 39 (2000): 3899-3907.
Wengenack, NL, H. Lopes, MJ Kennedy, P. Tavares, AS Pereira, I. Moura, JJG Moura, and F. Rusnak. "{Redox potential measurements of the Mycobacterium tuberculosis heme protein KatG and the isoniazid-resistant enzyme KatG(S315T): Insights into isoniazid activation}." Biochemistry. 39 (2000): 11508-11513. Abstract
Mycobacterium tuberculosis KatG is a multifunctional heme enzyme responsible for activation of the antibiotic isoniazid. A KatG(S315T) point mutation is found in >50% of isoniazid-resistant clinical isolates. Since isoniazid activation is thought to involve an oxidation reaction, the redox potential of KatG was determined using cyclic voltammetry, square wave voltammetry, and spectroelectrochemical titrations. Isoniazid activation may proceed via a cytochrome P450-like mechanism. Therefore, the possibility that substrate binding by KatG leads to an increase in the heme redox potential and the possibility that KatG(S315T) confers isoniazid resistance by altering the redox potential were examined. Effects of the heme spin state on the reduction potentials of KatG and KatG(S315T) were also determined. Assessment of the Fe3+/Fe2+ couple gave a midpoint potential of ca. -50 mV for both KatG and KatG(S315T). In contrast to cytochrome P450s, addition of substrate had no significant effect on either the KatG or KatG(S315T) redox potential. Conversion of the heme to a low-spin configuration resulted in a -150 to -200 mV shift of the KatG and KatG(S315T) redox potentials. These results suggest that isoniazid resistance conferred by KatG(S315T) is not mediated through changes in the heme redox potential. The redox potentials of isoniazid were also determined using cyclic and square wave voltammetry, and the results provide evidence that the ferric KatG and KatG(S315T) midpoint potentials are too low to promote isoniazid oxidation without formation of a high-valent enzyme intermediate such as compounds I and IT or oxyferrous KatG.
1999
Cipriano, F. "The two dimensional Euler equation: A statistical study." COMMUNICATIONS IN MATHEMATICAL PHYSICS. 201 (1999): 139-154. Abstract

{We construct surface type measures on the level sets for the renormalized energy, which is an invariant quantity for the two dimensional periodic Euler flow, and prove the existence of weak solutions living on such level sets. Other classes of invariant measures for the motion are also introduced.}

Cipriano, F., and A. B. Cruzeiro. "Flows associated to tangent processes on the Wiener space." JOURNAL OF FUNCTIONAL ANALYSIS. 166 (1999): 310-331. Abstract

{We prove, under certain regularity assumptions on the coefficients, that tangent processes (namely semimartingales d xi(tau) = a dx(tau) + b d tau where a is an antisymmetric matrix) generate flows on the classical Wiener space. Main applications of the result can be found in the study of the geometry of path spaces. (C) 1999 Academic Press.}

Nunes, Isabel L. ERGO_X - An ergonomic expert system. Dep Industrial Engineering and Management Systems, Univ Central Florida, Orlando - USA, 1999. Abstract
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Allain, Ronan, Philippe Taquet, Bernard Battail, Jean Dejax, Philippe Richir, Monette Veran, Franck Limon-Duparcmeur, R. Vacant, O. Mateus, Phouvong Sayarath, Bounxou Khenthavong, and Sitha Phouyavong. "Un nouveau genre de dinosaure sauropode de la formation des Gres superieurs (Aptien-Albien) du Laos." Comptes Rendus de l'Academie des Sciences - Series IIA - Earth and Planetary Science. 329 (1999): 609-616. Abstractallain_taquet_battail_dejax_richir_mateus_et_al_1999_un_nouveau_genre_de_dinosaure_sauropode_de_la_formation_des_gres_superieurs_aptien-albien_du_laos.pdfWebsite

The partly-articulated postcranial remains of two sauropod skeletons recently found in Tang Vay (Savannakhet Province, Laos) are assigned to the species Tangvayosaurus hoffeti (nov. gen., nov. sp.). The derived characters present in the new material confirm the presence of titanosaurs in South East Asia at the end of the Early Cretaceous, but are not consistent with its placement within Titanosaurus genus as first done by Hoffet in 1942. All of the material relative to this species is therefore referred to a new genus: Tangvayosaurus. Tangvayosaurus and the Thai genus Phuwiangosaurus have strong affinities and are considered as primitive titanosaurs.

Allain, Ronan, Philippe Taquet, Bernard Battail, Jean Dejax, Philippe Richir, Monette Véran, Franck Limon-Duparcmeur, Renaud Vacant, Octavio Mateus, Phouvong Sayarath, Bounxou Khenthavong, and Sitha Phouyavong. "Un nouveau genre de dinosaure sauropode de la formation des Grès supérieurs (Aptien-Albien) du Laos." Comptes Rendus de l{\textquotesingle}Académie des Sciences - Series {IIA} - Earth and Planetary Science. 329 (1999): 609-616. AbstractWebsite
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Cunha, José C., João Louren{\c c}o, and Tiago Antão. "An experiment in tool integration: the DDBG parallel and distributed debugger." J. Syst. Archit.. 45 (1999): 897-907. AbstractWebsite
Most known teaching experiences focus on parallel computing courses only, but some teaching experiences on distributed computing courses have also been reported. In this paper we describe a course on Parallel and Distributed Processing that is taught at undergraduate level in the Computer Science degree of our University.This course presents an integrated approach concerning concurrency, parallelism, and distribution issues. It’s a breadth-first course addressing a wide spectrum of abstractions: the theoretical component focus on the fundamental abstractions to model concurrent systems, including process cooperation schemes, concurrent programming models, data and control distribution, concurrency control and recovery in transactional systems, and parallel processing models; the practical component illustrates the design and implementation issues involved in selected topics such as a data and control distribution problem, a distributed transaction-based support system and a parallel algorithm.We also discuss how this approach has been contributing to prepare the student to further actions regarding research and development of concurrent, distributed, or parallel systems.
Cunha, José C., João M. Lourenço, and Tiago Antão. "An experiment in tool integration: the {DDBG} parallel and distributed debugger." J. Syst. Archit.. 45 (1999): 897-907. Abstractjsa99.pdfWebsite

Most known teaching experiences focus on parallel computing courses only, but some teaching experiences on distributed computing courses have also been reported. In this paper we describe a course on Parallel and Distributed Processing that is taught at undergraduate level in the Computer Science degree of our University.This course presents an integrated approach concerning concurrency, parallelism, and distribution issues. It's a breadth-first course addressing a wide spectrum of abstractions: the theoretical component focus on the fundamental abstractions to model concurrent systems, including process cooperation schemes, concurrent programming models, data and control distribution, concurrency control and recovery in transactional systems, and parallel processing models; the practical component illustrates the design and implementation issues involved in selected topics such as a data and control distribution problem, a distributed transaction-based support system and a parallel algorithm.We also discuss how this approach has been contributing to prepare the student to further actions regarding research and development of concurrent, distributed, or parallel systems.

Correia, C., E. Monzani, I. Moura, J. Lampreia, and JJG Moura. "Cross-linking between cytochrome c(3) and flavodoxin from Desulfovibrio gigas." BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS. 256 (1999): 367-371. Abstract
Tetraheme cytochrome c(3) (13 kDa) and flavodoxin (16 kDa), are small electron transfer proteins that have been used to mimic, in vitro, part of the electron-transfer chain that operates between substract electron donors and respiratory electron accepters partners in Desulfovibrio species (Palma, N., Moura, I., LeGall, J., Van Beeumen, J., Wampler, J., Moura, J. J. G. (1994) Biochemistry 33, 6394-6407). The electron transfer between these two proteins is believed to occur through the formation of a specific complex where electrostatic interaction is the main driving force (Stewart, D., LeGall, J., Moura, I., Moura, J.J.G., Peck, H.D., Xavier, A.V., Weiner, P.K. and Wampler, J.E. (1988) Biochemistry 27, 2444-2450, Stewart, D., LeGall, J., Moura, I., Moura, J.J.G., Peck, H.D., Xavier, A.V., Weiner, P., Wampler, J. (1989) fur. J. Biochem. 185, 695-700). In order to obtain structural information of the pre-complex, a covalent complex between the two proteins was prepared. A water-soluble carbodiimide {[}EDC (1-ethyl-3(3 dimethylaminopropyl) carbodiimide hydrochloride] was used for the cross linking reaction. The reaction was optimized varying a wide number of experimental parameters such as ionic strength, protein and cross linker concentration, and utilization of different cross linkers and reaction time between the crosslinker and proteins. (C) 1999 Academic Press.
Kuhlmann, Stefan, Patries Boekholt, Luke Georghiou, Ken Guy, Jean-Alain Heraud, Philippe Laredo, Tarmo Lemola, Denis Loveridge, Terttu Luukkonen, António Moniz, Wolfgang Polt, and Ri Improving Distributed Intelligence in Complex Innovation Systems. University Library of Munich, Germany, 1999. Abstract

Science and technology (S&T) are considered to be a central source, or at least a basic medium, of societal and industrial innovation, while innovation is conceived to basically feed the regeneration of our welfare. The suppliers of S&T in Europe as well as the users of their „products“, are confronted with a number of challenges today. We want to stress here that it was not the primary goal of our Advanced Science & Technology Policy Planning (ASTPP) Network to come up with proposals how the strategic character of European S&T policies could be strengthened. The ASTPP-network instead focuses on one aspect: the provision of strategic intelligence necessary to identify and develop strategic choices. The underlying hypothesis is that the existing body of experiences with technology foresight, technology assessment and S/T policy evaluation provides a basis for the development of an advanced S&T policy „planning“ approach by trying to enhance, interlink or even integrate the growing, but still dispersed experience in these three areas of intelligence. By „intelligent“ we mean that the inter-relatedness of S&T, industrial efforts, societal needs and political interventions becomes more transparent so that interactive collaboration between them will be facilitated.