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2008
Fortunato, Elvira, Pedro Barquinha, Goncalo Goncalves, Luis Pereira, and Rodrigo Martins. "New Amorphous Oxide Semiconductor for Thin Film Transistors (TFTs)." Advanced Materials Forum Iv. Eds. AT Marques, AF Silva, APM Baptista, C. Sa, FJLA Alves, LF Malheiros, and M. Vieira. Vol. 587-588. Materials Science Forum, 587-588. 2008. 348-352. Abstract
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Fortunato, E., Barquinha Gonçalves Pereira Martins P. G. L. "New amorphous oxide semiconductor for thin film transistors (TFTs)." Materials Science Forum. 587-588 (2008): 348-352. AbstractWebsite

Thin film transistors (TFTs) have been produced by rf magnetron sputtering at room temperature, using non conventional oxide materials like amorphous indium-zinc-oxide (IZO) semiconductor, for the channel as well as for the drain and source regions. The obtained TFTs operate in the enhancement mode with threshold voltages of 2.4 V, saturation mobility of 22.7 cm2/Vs, gate voltage swing of 0.44 V/dec and an ON/OFF current ratio of 7×10 7. The high performances presented by these TFTs associated to a high electron mobility, at least two orders of magnitude higher than that of conventional amorphous silicon TFTs and a low threshold voltage, opens new doors for applications in flexible, wearable, disposable portable electronics as well as battery-powered applications.

Neagu, R. M., E. R. Neagu, M. C. Lanca, and J. N. Marat-Mendes. "New Experimental Facts Concerning the Thermally Stimulated Discharge Current in Dielectric Materials." Advanced Materials Forum Iv. Eds. AT Marques, AF Silva, APM Baptista, C. Sa, FJLA Alves, LF Malheiros, and M. Vieira. Vol. 587-588. Materials Science Forum, 587-588. 2008. 328-332. Abstract

The thermally stimulated discharge current (TSDC.) method is a very sensitive and a very selective technique to analyze dipole disorientation and the movement of de-trapped space charge (SC). We have proposed a variant of the TSDC method, namely the final thermally stimulated discharge current (FTSDC) technique. flee experimental conditions can be selected so that the FTSDC is mainly determined by the SC de-trapping. The temperatures of the maximum intensity of the fractional polarization peaks obtained at low temperature, in the range of the local (secondary) relaxation, are in general about 10 to 20 K above the poling temperature. Measurements of the FTSDC in a wide temperature range demonstrate the existence of an apparent peak at a temperature T-ma shifted with about 10 to 30 K above the charging temperature T-c. The shift of T-ma with respect to T-c depends on the experimental conditions. The peak width at the half maximum intensity decreases as T-c increases and the thermal apparent activation energy increases. The variations are not monotonous revealing the temperature range where the molecular motion is stronger and consequently the charge trapping and de-trapping processes are affected. Our results demonstrate that there is a strong similarity between the elementary peaks obtained by the two methods, and the current is mainly determined by SC de-trapping. Even the best elementary peaks are not fitted very well by the analytical equation, indicating that the hypothesis behind this equation have to be reconsidered.

Neagu, R. M., E. R. Neagu, Carmo M. Lanca, and J. N. Marat-Mendes. "New Experimental Facts Concerning the Thermally Stimulated Discharge Current in Dielectric Materials." Advanced Materials Forum Iv. Eds. AT Marques, AF Silva, APM Baptista, C. Sa, FJLA Alves, LF Malheiros, and M. Vieira. Vol. 587-588. Materials Science Forum, 587-588. 2008. 328-332. Abstract

The thermally stimulated discharge current (TSDC.) method is a very sensitive and a very selective technique to analyze dipole disorientation and the movement of de-trapped space charge (SC). We have proposed a variant of the TSDC method, namely the final thermally stimulated discharge current (FTSDC) technique. flee experimental conditions can be selected so that the FTSDC is mainly determined by the SC de-trapping. The temperatures of the maximum intensity of the fractional polarization peaks obtained at low temperature, in the range of the local (secondary) relaxation, are in general about 10 to 20 K above the poling temperature. Measurements of the FTSDC in a wide temperature range demonstrate the existence of an apparent peak at a temperature T-ma shifted with about 10 to 30 K above the charging temperature T-c. The shift of T-ma with respect to T-c depends on the experimental conditions. The peak width at the half maximum intensity decreases as T-c increases and the thermal apparent activation energy increases. The variations are not monotonous revealing the temperature range where the molecular motion is stronger and consequently the charge trapping and de-trapping processes are affected. Our results demonstrate that there is a strong similarity between the elementary peaks obtained by the two methods, and the current is mainly determined by SC de-trapping. Even the best elementary peaks are not fitted very well by the analytical equation, indicating that the hypothesis behind this equation have to be reconsidered.

Neagu, R. M., E. R. Neagu, Carmo M. Lanca, J. N. Marat-Mendes, AT Marques, AF Silva, APM Baptista, C. Sa, FJLA Alves, LF Malheiros, and M. Vieira. "New Experimental Facts Concerning the Thermally Stimulated Discharge Current in Dielectric Materials." Advanced Materials Forum Iv. Vol. 587-588. 2008. 328-332. Abstract
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Schulp, AS, M. J. Polcyn, O. Mateus, LL Jacobs, and ML Morais. "A new species of Prognathodon (Squamata, Mosasauridae) from the Maastrichtian of Angola, and the affinities of the mosasaur genus Liodon." Proceedings of the Second Mosasaur Meeting, Fort Hays Studies Special Issue 3, Fort Hays State University, Hays, Kansas. 2008. 1-12. Abstract
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Mateus, O., SCR Maidment, and NA Christiansen. "A new specimen aff. Dacentrurus armatus (Dinosauria: Stegosauridae) from the Late Jurassic of Portugal." Livro de Resumos de Tercer Congreso Latinoamericano de Paleontología de Vertebrados. Neuquén, Argentina 2008. 157. Abstract
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Mateus, O., SCR Maidment, and NA Christiansen. "A new specimen aff. Dacentrurus armatus (Dinosauria: Stegosauridae) from the Late Jurassic of Portugal." Livro de Resumos de Tercer Congreso Latinoamericano de Paleontología de Vertebrados. Neuquén, Argentina 2008. 157. Abstract
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Mateus, O., C. Natario, R. Araujo, and R. Castanhinha. "A new specimen of spinosaurid dinosaur aff. Baryonyx from the Early Cretaceous of Portugal." Livro de Resumos do X Congresso Luso-Espanhol de Herpetologia. Ed. Coimbra Universidade de. Coimbra 2008. 51. Abstract
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Mateus, O., C. Natario, R. Araujo, and R. Castanhinha. "A new specimen of spinosaurid dinosaur aff. Baryonyx from the Early Cretaceous of Portugal." Livro de Resumos do X Congresso Luso-Espanhol de Herpetologia. Coimbra 2008. 51. Abstract
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Gavel, OY, SA Bursakov, G. Di Rocco, J. Trincao, I. J. Pickering, GN George, JJ Calvete, VL Shnyrov, CD Brondino, AS Pereira, J. Lampreia, P. Tavares, JJG Moura, and I. Moura. "A new type of metal-binding site in cobalt- and zinc-containing adenylate kinases isolated from sulfate-reducers Desulfovibrio gigas and Desulfovibrio desulfuricans ATCC 27774." Journal of Inorganic Biochemistry. 102 (2008): 1380-1395. AbstractWebsite

Adenylate kinase (AK) mediates the reversible transfer of phosphate groups between the adenylate nucleotides and contributes to the maintenance of their constant cellular level, necessary for energy metabolism and nucleic acid synthesis. The AK were purified from crude extracts of two sulfate-reducing bacteria (SRB), Desulfovibrio (D.) gigas NCIB 9332 and Desulfovibrio desulfuricans ATCC 27774, and biochemically and spectroscopically characterised in the native and fully cobalt- or zinc-substituted forms. These are the first reported adenylate kinases that bind either zinc or cobalt and are related to the subgroup of metal-containing AK found, in most cases, in Gram-positive bacteria. The electronic absorption spectrum is consistent with tetrahedral coordinated cobalt, predominantly via sulfur ligands, and is supported by EPR. The involvement of three cysteines in cobalt or zinc coordination was confirmed by chemical methods. Extended X-ray absorption fine structure (EXAFS) indicate that cobalt or zinc are bound by three cysteine residues and one histidine in the metal-binding site of the "LID" domain. The sequence (129)Cys-X(5)-His-X(15)-Cys-X(2)-Cys of the AK from D. gigas is involved in metal coordination and represents a new type of binding motif that differs from other known zinc-binding sites of AK. Cobalt and zinc play a structural role in stabilizing the LID domain. (C) 2008 Elsevier Inc. All rights reserved.

Morrison, J. C., S. Boyd, L. Marsano, B. Bialecki, T. Ericsson, and J. P. Santos. "Numerical methods for solving the Hartree-Fock equations of diatomic molecules I." Communications in Computational Physics. 5 (2008): 959-985. AbstractWebsite
The theory of domain decomposition is described and used to divide the variable domain of a diatomic molecule into separate regions which are solved independently. This approach makes it possible to use fast Krylov methods in the broad interior of the region while using explicit methods such as Gaussian elimination on the boundaries. As is demonstrated by solving a number of model problems, these methods enable one to obtain solutions of the relevant partial differential equations and eigenvalue equations accurate to six significant figures with a small amount of computational time. Since the numerical approach described in this article decomposes the variable space into separate regions where the equations are solved independently, our approach is very well-suited to parallel computing and offers the long term possibility of studying complex molecules by dividing them into smaller fragments that are calculated separately.
Cismaiu, C., and F. P. A. Dos Santos. "Numerical simulation of superelastic shape memory alloys subjected to dynamic loads." Smart Materials and Structures. 17 (2008). AbstractWebsite
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2007
Cipriano, F., and A. B. Cruzeiro. "Navier-stokes equation and diffusions on the group of homeomorphisms of the torus." COMMUNICATIONS IN MATHEMATICAL PHYSICS. 275 (2007): 255-269. Abstract

{A stochastic variational principle for the (two dimensional) Navier-Stokes equation is established. The velocity field can be considered as a generalized velocity of a diffusion process with values on the volume preserving diffeomorphism group of the underlying manifold. Navier-Stokes equation is reinterpreted as a perturbed equation of geodesics for the L (2) norm. The method described here should hold as well in higher dimensions.}

Inácio, David, João Pina, Anabela Gonçalves, Mário Neves, and Amadeu Rodrigues. "Numerical and Experimental Comparison of Electromechanical Properties and Efficiency of HTS and Ferromagnetic Hysteresis Motors." 8th European Conference on Applied Superconductivity (EUCAS). 2007. Abstract

Hysteresis motors are very attractive in a wide range of fractional power applications, due to its torque-speed characteristics and simplicity of construction. This motor's performance is expected to improve when HTS rotors are used, and in fact, hysteresis motors have shown to be probably the most viable electrical machines using HTS materials. While these motors, either conventional or HTS, are both hysteresis motors, they base their operation on different physical phenomena: hysteretic behaviour in conventional ferromagnetic materials is due to the material's non-linear magnetic properties, while in HTS materials the hysteresis has an ohmic nature and is related with vortices' dynamics. In this paper, theoretical aspects of both conventional and HTS hysteresis motors are discussed, its operation principles are highlighted, and the characteristics of both motors are presented. The characteristics, obtained both by experimental tests and numerical simulation (made with commercial software), are compared, in order to evaluate not only the motor's electromechanical performances but also the overall systems efficiency, including cryogenics for the HTS device.

Pauleta, S. R., A. G. Duarte, M. S. Carepo, AS Pereira, P. Tavares, I. Moura, and J. J. Moura. "NMR assignment of the apo-form of a Desulfovibrio gigas protein containing a novel Mo-Cu cluster." Biomol NMR Assign. 1 (2007): 81-3. AbstractWebsite

We report the 98% assignment of the apo-form of an orange protein, containing a novel Mo-Cu cluster isolated from Desulfovibrio gigas. This protein presents a region where backbone amide protons exchange fast with bulk solvent becoming undetectable. These residues were assigned using 13C-detection experiments.

Mateus, O. "Notes and review of the ornithischian dinosaurs of Portugal." Journal of Vertebrate Paleontology. Vol. 27. Journal of Vertebrate Paleontology, 27. Society of Vertebrate Paleontology, 2007. 114A. Abstractmateus_2007_notes_and_review_of_ornithichians_of_portugall.pdf

The record of ornithischian dinosaurs from Portugal is substantial but incomplete in terms of our understanding of taxonomic composition and details of the anatomy of many forms. New data and reinterpretation of these forms are provided. The basal thyreophoran from the Lower Jurassic (the nomen dubium “Lusitanosaurus liasicus”) is the most primitive dinosaur from Iberia. Concerning the Late Jurassic, new material from the Lourinhã Formation (Kimmeridgian/Tithonian) referable to the stegosaur Dacentrurus provides additional information on the systematic position and osteology.
The new material shows two rows of paired triangular plates, with a notch in the anterior rim. A maxillary of an ankylosaur from the Vale Frades (Lourinhã Fm.) is here reported, but cannot be referable to Dracopelta, the only ankylosaur genus currently known from Portugal. The ornithopod Alocodon kuehnei reported as Middle Jurassic (Callovian) is probably Oxfordian in age. A right dentary (ML768 from Zimbral) from the Lourinhã Formation, Kimmeridgian/Tithonian, and shares affinities with Dryosaurus but possesses more denticulation and no secondary ridges, suggesting the occurrence of a new or unreported species for the Late Jurassic of Portugal, which is here tentatively ascribed to aff. Dryosaurus sp. In summary, the Late Jurassic ornithischians species/genera from Portugal include Dacentrurus armatus, Stegosaurus cf. ungulatus, Dracopelta zbyszewskii, Phyllodon henkeli, Hypsilophodon sp., Alocodon kuehnei, Trimucrodon cuneatus, aff. Dryosaurus and Draconyx loureiroi. The Lower Cretaceous (Hauterivian / Barremian) of Praia das Aguncheiras, in Cabo Espichel, provided a partial left maxillary (CPGP.1.99.7) of a basal iguanodontian that shows affinities with Camptosaurus, and is tentatively assigned to this genus. The maxillary teeth denticles differ from Iguanodon or other Iguanodontoidea because not show mammillations. More material is necessary to validate but, to be true, that would confirm the presence of this genus in the lower Cretaceous. The Iguanodon has been well reported in the Lower Cretaceous of Cabo Espichel.

Rauter, Amelia P., Isabel Branco, Rui G. Lopes, Jorge Justino, Filipa V. M. Silva, Joao P. Noronha, Eurico J. Cabrita, Ignacio Brouard, and Jaime Bermejo. "A new lupene triterpenetriol and anticholinesterase activity of Salvia sclareoides." Fitoterapia. 78 (2007): 474-481. Abstract
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Doria, Gonçalo, Ricardo Franco, and Pedro Baptista. "Nanodiagnostics: fast colorimetric method for single nucleotide polymorphism/mutation detection." IET Nanobiotechnology. 1.4 (2007): 53-57.doria_et_al_iet_nanobiotech_1_2007_53-57.pdf
Ortigueira, M. D., and AG Batista. "A new look at the fractional Brownian motion definition." Conference on Multibody Systems, Nonlinear Dynamics and Control (MSNDC). ASME IDETC07, 2007.
Rauter, Amélia P., Isabel Branco, Rui G. Lopes, Jorge Justino, Filipa V. M. Silva, João P. Noronha, Eurico J. Cabrita, Ignacio Brouard, and Jaime Bermejo. "A new lupene triterpenetriol and anticholinesterase activity of Salvia sclareoides." Fitoterapia. 78.7-8 (2007): 474-481.A New Lupene Triterpenetriol and Anticholinesterase Activity of Salvia sclareoides 2007.pdf
Oliveira, F., and A. J. Soares. "A non-trivial explicit solution for the 14-velocity Cabannes kinetic model." Journal of Nonlinear Analysis TMA. 67.4 (2007): 1167-1172.Website
Coelho, Carlos A., and Filipe J. Marques. "Near-exact approximations for the likelihood ratio test statistic for testing equality of several variance-covariance matrices." Universidade Nova de Lisboa, Departamento de Matemática, Relatório Técnico. 12 (2007): 2007. Abstract
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Costa, I., D. Filip, J. L. Figueirinhas, and M. H. Godinho. "New cellulose derivatives composites for electro-optical sensors." Carbohydrate polymers. 68.1 (2007): 159-165. Abstract
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Pauleta, S. R., A. G. Duarte, M. S. Carepo, AS Pereira, P. Tavares, I. Moura, and JJG Moura. "NMR assignment of the apo-form of a Desulfovibrio gigas protein containing a novel Mo-Cu cluster." Biomolecular Nmr Assignments. 1 (2007): 81-83. AbstractWebsite

We report the 98% assignment of the apo-form of an orange protein, containing a novel Mo-Cu cluster isolated from Desulfovibrio gigas. This protein presents a region where backbone amide protons exchange fast with bulk solvent becoming undetectable. These residues were assigned using C-13-detection experiments.

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