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2008
Aguas, H., R. J. C. Silva, M. Viegas, L. Pereira, E. Fortunato, and R. Martins. "Study of environmental degradation of silver surface." physica status solidi (c). 5 (2008): 1215-1218. Abstract
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Oliveira, L. B., J. R. Fernandes, I. M. Filanovsky, C. J. M. Verhoeven, and M. M. Silva. "Transceiver Architectures and RF Blocks." Analysis and Design of Quadrature Oscillators (2008): 7-35. Abstract
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Oliveira, L. B., J. R. Fernandes, I. M. Filanovsky, C. J. M. Verhoeven, and M. M. Silva. "Two-Integrator Oscillator." Analysis and Design of Quadrature Oscillators (2008): 99-117. Abstract
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Santos, J. P., M. C. Martins, A. M. Costa, P. Indelicato, and F. Parente. "X-ray spectra emitted by Cl14+ ions in ECRIS plasmas." Vacuum. 82 (2008): 1522-1524. AbstractWebsite
We study the contribution of the most important processes leading to the creation of excited states of Cl14+ ions from the ground configurations of Cl ions in an Electron Cyclotron Resonance Ion Source (ECRIS), which lead to the emission of K X-ray lines. Theoretical values for inner-shell excitation, K and KL ionization cross-sections, and energies and transition probabilities for the de-excitation processes are calculated in the framework of the Multi-Configuration Dirac-Fock (MCDF) method. With reasonable assumptions about the electron energy distribution, a theoretical K[alpha] X-ray spectrum is obtained, which reproduces closely a recent experimental result.
Santos, J. P., M. C. Martins, A. M. Costa, P. Indelicato, and F. Parente. "X-ray spectra emitted by Cl14+ ions in ECRIS plasmas." Vacuum. 82 (2008): 1522-1524. AbstractWebsite

We study the contribution of the most important processes leading to the creation of excited states of Cl14+ ions from the ground configurations of Cl ions in an Electron Cyclotron Resonance Ion Source (ECRIS), which lead to the emission of K X-ray lines. Theoretical values for inner-shell excitation, K and KL ionization cross-sections, and energies and transition probabilities for the de-excitation processes are calculated in the framework of the Multi-Configuration Dirac-Fock (MCDF) method. With reasonable assumptions about the electron energy distribution, a theoretical K[alpha] X-ray spectrum is obtained, which reproduces closely a recent experimental result.

Gavel, Olga Yu, Sergey A. Bursakov, Giulia Di Rocco, Jose Trincao, Ingrid J. Pickering, Graham N. George, Juan J. Calvete, Valery L. Shnyrov, Carlos D. Brondino, Alice S. Pereira, Jorge Lampreia, Pedro Tavares, Jose J. G. Moura, and Isabel Moura. "{A new type of metal-binding site in cobalt- and zinc-containing adenylate kinases isolated from sulfate-reducers Desulfovibrio gigas and Desulfovibrio desulfuricans ATCC 27774}." Journal Of Inorganic Biochemistry. 102 (2008): 1380-1395. Abstract
Adenylate kinase (AK) mediates the reversible transfer of phosphate groups between the adenylate nucleotides and contributes to the maintenance of their constant cellular level, necessary for energy metabolism and nucleic acid synthesis. The AK were purified from crude extracts of two sulfate-reducing bacteria (SRB), Desulfovibrio (D.) gigas NCIB 9332 and Desulfovibrio desulfuricans ATCC 27774, and biochemically and spectroscopically characterised in the native and fully cobalt- or zinc-substituted forms. These are the first reported adenylate kinases that bind either zinc or cobalt and are related to the subgroup of metal-containing AK found, in most cases, in Gram-positive bacteria. The electronic absorption spectrum is consistent with tetrahedral coordinated cobalt, predominantly via sulfur ligands, and is supported by EPR. The involvement of three cysteines in cobalt or zinc coordination was confirmed by chemical methods. Extended X-ray absorption fine structure (EXAFS) indicate that cobalt or zinc are bound by three cysteine residues and one histidine in the metal-binding site of the "LID" domain. The sequence (129)Cys-X-5-His-X-15-Cys-X-2-Cys of the AK from D. gigas is involved in metal coordination and represents a new type of binding motif that differs from other known zinc-binding sites of AK. Cobalt and zinc play a structural role in stabilizing the LID domain. (C) 2008 Elsevier Inc. All rights reserved.
Mendes, Manuel J., Howard K. Schmidt, and Matteo Pasquali. "{Brownian dynamics simulations of single-wall carbon nanotube separation by type using dielectrophoresis}." Journal of Physical Chemistry B (2008). AbstractWebsite
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Coimbra, Patrícia, MH Gil, Herminio De C. Sousa, and Catarina M. M. Duarte. "{T O T S I U Rib N Tio T O T S I N}." (2008): 102-107. Abstract
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Duarte, A. R. C., A. Shariati, L. J. Rovetto, and C. J. Peters. "{Water cavities of sH clathrate hydrate stabilized by molecular hydrogen: Phase equilibrium measurements}." Journal of Physical Chemistry B. 112 (2008). Abstract

In this experimental phase equilibrium study, we show for the first time that it is possible to stabilize structure sH of hydrogen clathrate hydrate with the help of some selected promoters. It was established that the formation pressures of these systems are significantly higher than that of structure sII of hydrogen clathrate hydrate when tetrahydrofuran (THF) is used as a promoter. Although no experimental evidence is available yet, it is estimated that the hydrogen storage capacity of structure sH can be as high as 1.4 wt {%} of H 2 , which is about 40{%} higher compared to the hydrogen storage capacity in structure sH. © 2008 American Chemical Society.

2007
Martins, R. M. S., N. Schell, R. J. C. Silva, L. Pereira, K. K. Mahesh, and F. M. Braz Fernandes. "In-situ study of Ni-Ti thin film growth on a TiN intermediate layer by X-ray diffraction." Sensors and Actuators B-Chemical. 126.1 (2007): 332-337. Abstract
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Sampaio, José, and António Moniz Assessing Human And Technological Dimensions In Virtual Team’S Operational Competences. University Library of Munich, Germany, 2007. Abstract

Cognitive task automation may lead to over trust, complacency and loss of the necessary work environment situation awareness. This is a major constraint in complex work organizations teamwork, ending up into an operational gap, between system developments and its understanding and usability, by operators. This document presents a summary of the main results of author’s research on operational decision processes and occupational competences, applied to the air traffic control operational reality. Introducing a human/technological complementary approach to virtual team’s conceptualisation, the results show there is a dimension to be followed in human/machine integration, which stands beyond interface design, and calls for a deeper human comprehension of technological agent’s structure and functionalities, which will, ultimately, require the development of an operational cognitive framework, where work processes and technological behaviour are integrated in professional competences, as he two faces of the same coin.

Martins, R., N. Schell, R. Silva, L. Pereira, K. MAHESH, and F. FERNANDES. "{In-situ study of Ni–Ti thin film growth on a TiN intermediate layer by X-ray diffraction}." Sensors and Actuators B: Chemical. 126 (2007): 332-337. AbstractWebsite
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Nunes, Isabel L. Contributo da Análise e Avaliação de Riscos Ergonómicos para a Saúde e Segurança no Trabalho. O caso do FAST ERGO_X. Eds. Guedes C. Soares, A.P. Teixeira, and P. Antão. II Encontro Nacional de Riscos, Segurança e Fiabilidade: Riscos Públicos e Industriais. Lisboa: Ed. Salamandra, 2007. Abstract
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Nunes, Isabel L., Ana Filipa Costa, Ana Fortes Baptista, and Fátima M. Valério TPM e a Saúde e a Segurança no Trabalho. Eds. Guedes C. Soares, A.P. Teixeira, and P. Antão. II Encontro Nacional de Riscos, Segurança e Fiabilidade: Riscos Públicos e Industriais. Lisboa: Ed. Salamandra, 2007. Abstract
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Musat, V., E. Fortunato, Braz F. Fernandes, and Jorge Cordetro R. Silva. "Sol gel porous ZnO thin films for gas sensing applications." Journal of Optoelectronics and Advanced Materials. 9.5 (2007): 1395-1398. Abstract
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Moniz, António Brandão, Ana V. Silva, Tobias Woll, and José J. Sampaio Globalization processes of value chains in clothing industry in Portugal: implication in the working structures. HAL, 2007. Abstract

Some of the phenomena where the “globalization” concept is applied include the internationalization of markets, globalization of culture, polítical hegemony of world by some states, or groups of states, the increasing power of supranational institutions, and the development of a global division of labour. A starting point to understand the global division of work is the study of how companies are re-structuring, once they are the key-actors in the decision on which work should be found and where. The “value chains” describe each step in the productive process of a final product or service. Separated units of value chains can be in the same company (in-house) or in different companies (outsourced). Similarly they can be in a same local, or in other location. Normalization of business processes, combined with digitalization of information and the development of telecommunication networks made possible the tele-mediated work. This paper presents results from the European WORKS project, where are studied Portuguese cases of firms that integrate globalized value chain, and are analized the implications on work organization models and the (new) professional structures.

Sampaio, José, and António Brandão Moniz Qualificação e Competência Profissional Num Sistema Complexo De Trabalho (Qualification and professional competence in a complex working system). HAL, 2007. Abstract

Nesta comunicação em que se discutem, numa perspectiva de complementaridade, os conceitos de qualificação e de competência profissional, dá-se conta da metodologia adoptada para a identificação e validação de um conjunto de competências profissionais num sistema complexo de trabalho. O estudo incidiu sobre os Serviços de Controlo de Tráfego Aéreo da Região de Informação de Voo de Lisboa e permitiu concluir pela existência de uma dimensão integrativa das componentes trabalho e tecnologia, enquanto elementos estruturantes dos mapas de competências profissionais, indispensáveis à integração sistémica dos diferentes agentes (humanos e tecnológicos) no processo produtivo.

Guerreiro, B. J., C. Silvestre, R. Cunha, and D. Antunes. "{Trajectory tracking H2 controller for autonomous helicopters: an application to industrial chimney inspection}." 17th IFAC Symposium on Automatic Control in Aerospace. 2007. Abstract
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Guerreiro, B. J., C. Silvestre, R. Cunha, and D. Antunes. "{Trajectory tracking H2 controller for autonomous helicopters: an application to industrial chimney inspection}." 17th IFAC Symposium on Automatic Control in Aerospace. 2007. Abstract
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de Sousa, P. M. P., S. R. Pauleta, M. L. S. Goncalves, G. W. Pettigrew, I. Moura, M. M. C. dos Santos, and JJG Moura. "Mediated catalysis of Paracoccus pantotrophus cytochrome c peroxidase by P-pantotrophus pseudoazurin: kinetics of intermolecular electron transfer." Journal of Biological Inorganic Chemistry. 12 (2007): 691-698. AbstractWebsite

This work reports the direct electrochemistry of Paracoccus pantotrophus pseudoazurin and the mediated catalysis of cytochrome c peroxidase from the same organism. The voltammetric behaviour was examined at a gold membrane electrode, and the studies were performed in the presence of calcium to enable the peroxidase activation. A formal reduction potential, E (0)', of 230 +/- 5 mV was determined for pseudoazurin at pH 7.0. Its voltammetric signal presented a pH dependence, defined by pK values of 6.5 and 10.5 in the oxidised state and 7.2 in the reduced state, and was constant up to 1 M NaCl. This small copper protein was shown to be competent as an electron donor to cytochrome c peroxidase and the kinetics of intermolecular electron transfer was analysed. A second-order rate constant of 1.4 +/- 0.2 x 10(5) M(-1) s(-1) was determined at 0 M NaCl. This parameter has a maximum at 0.3 M NaCl and is pH-independent between pH 5 and 9.

Santos-Silva, Teresa, Joao Miguel Dias, Alain Dolla, Marie-Claire Durand, Luisa L. Goncalves, Jorge Lampreia, Isabel Moura, and Maria Joao Romao. "Crystal structure of the 16 heme cytochrome from Desulfovibrio gigas: A glycosylated protein in a sulphate-reducing bacterium." JOURNAL OF MOLECULAR BIOLOGY. 370 (2007): 659-673. Abstract
Sulphate-reducing bacteria have a wide variety of periplasmic cytochromes involved in electron transfer from the periplasm to the cytoplasm. HmcA is a high molecular mass cytochrome of 550 amino acid residues that harbours 16 c-type heme groups. We report the crystal structure of HmcA isolated from the periplasm of Desulfovibrio gigas. Crystals were grown. using polyethylene glycol 8K and zinc acetate, and diffracted beyond 2.1 angstrom resolution. A multiple-wavelength anomalous dispersion experiment at the iron absorption edge enabled us to obtain good-quality phases for structure solution and model building. DgHmcA has a V-shape architecture, already observed in HmcA isolated from Desulfovibrio vulgaris Hildenborough. The presence of an oligosaccharide molecule covalently bound to an Asn residue was observed in the electron density maps of DgHmcA and confirmed by mass spectrometry. Three modified monosaccharides appear at the highly hydrophobic vertex, possibly acting as an anchor of the protein to the cytoplasmic membrane. (c) 2007 Elsevier Ltd. All rights reserved.
Polcyn, M., L. Jacobs, A. Schulp, and O. Mateus. "Halisaurus (Squamata: Mosasauridae) from the Maastrichtian of Angola." Journal of Vertebrate Paleontology. 27.Suppl. to 3 (2007): 130A. Abstractpolcyn_et_al_mateus2007_halisaurus_angola_svpmeet.pdf

Recent fieldwork in the Namibe province in southern Angola yielded cranial and postcranial elements of at least two individuals of the rare and enigmatic mosasaur Halisaurus from a single small excavation. The genus Halisaurus is unique in retaining a primitive configuration of the temporal arcade, specifically a broad, vertically oriented contact between the parietal and the supratemporal. The supratemporal is broadly sutured to the opisthotic and prootic, unlike the condition in varanoids in which the simple lunate element lies between the parietal ramus and the squamosal and does not form a sutural contact with the opisthotic or prootic, but as in other halisaurines retains a plesiomorphic, vertically oriented contact with the parietal rami. The squamosal is lightly built and broadly arched as in Varanus. Comparison with known halisaurines indicates the new material is referable to the species Halisaurus arambourgi.
The locality that yielded the new specimens has also yielded a large number of isolated teeth, bones, articulated, and associated skeletons of Mosasaurus, Prognathodon, Globidens, and Plioplatecarpus, which with Halisaurus comprise a mosasaur assemblage most similar to that reported from the Maastrichtian of Morocco.

MC, Lanca, Fu M, Neagu E, Dissado LA, Marat-MendeS J, Tzimas A, and Zadeh S. "Space charge analysis of electrothermally aged XLPE cable insulation." Journal of Non-Crystalline Solids. 353 (2007): 4462-4466. AbstractWebsite
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