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2023
Gomes, G., H. Rebelo, V. Lúcio, C. Cismasiu, and J. Mingote. "Experimental Research and Development on Blast Resistant Structures." Advances on Testing and Experimentation in Civil Engineering, Springer Tracts in Civil Engineering. Switzerland: Springer Nature, 2023. 1-20.
Botelho, M. C., T. Coelho, and H. Rocha Fluência representacional: a Matemática na resolução de problemas de Física. Atas do EIEM 2023 – Encontro em Investigação em Educação Matemática. Aveiro: SPIEM, 2023.
Werneburg, I., Y. Pommery, M. Ruciński, B. Kästle, GJ Cohen, N. Natchev, O. Mateus, and GD Ferreira Functional morphology of the skull of Henodus chelyops (Placodontia). International Congress of Vertebrate Morphology Cairns - QLD - Australia 28 July - 1 August 2023. The Anatomical Record., 2023. Abstractwerneburg_et_al_2023_henodus_icvm_2023_abstracts_updated_8_14-1693344432.pdf

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Martins, R., F. Viseu, and H. Rocha. "Functional Thinking: A Study with 10th-Grade Students." Education Sciences. 13.4 (2023): 1-22. AbstractWebsite

This study aims to understand the functional thinking of 10th-grade students while studying functions. Specifically, we intend to answer the following research questions: what are the functional thinking processes used by 10th-grade students when studying functions? What difficulties do students present while learning functions? In view of the nature of this research objective, we adopted a qualitative and interpretative approach. In order to answer these questions, data were collected from the written records produced by the students while solving the proposed tasks, from records of the oral interactions during discussions and from a questionnaire. The results show that functional thinking processes were implicit in the resolution of the tasks proposed to the students. The students expressed an understanding of how the variables were related, presenting evidence of their functional thinking while working on the new concepts represented by the functions addressed in the proposed tasks. Some students expressed difficulties in interpreting the different types of representations associated with the functions, in retaining the necessary information from a graphical representation that would help them to draw conclusions and establish correspondences, in explaining functional relationships, and in interpreting the information provided by algebraic expressions. These difficulties can reduce the recognition of the relationships between variables and their behavior in the different representations, becoming an obstacle to learning for some students.

Ferrás, L., M. L. Morgado, and Magda Rebelo. "A generalised distributed-order Maxwell model." Mathematical Methods in the Applied Sciences. 46 (2023): 368-387. Abstract

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Botelho, M. C., T. Coelho, and H. Rocha How the use of different technologies mobilises different domains of professional knowledge. Cerme 13. Budapest, Hungary, 2023.
Rocha, H. "The impact of teachers' knowledge on the connection between technology supported exploration and mathematical proof." European Journal of Science and Mathematics Education. 11.4 (2023): 635-649. AbstractWebsite

Technology is recognized for its potential to implement exploration tasks. The ease and speed with which it becomes possible to observe many cases of a situation, allows the development of conjectures and brings conviction about their veracity. Mathematical proof, assumed as the essence of Mathematics, tends to appear to the students as something dispensable. Based on KTMT – Knowledge for Teaching Mathematics with Technology model, this study intends to understand the impact of the teachers’ knowledge on mathematical proof in a context of technology integration. The study adopts a qualitative and interpretative methodology, based on case study, analyzing the practice of one teacher. The conclusions emphasize the relevance of the teacher’s MTK – Mathematics and Technology Knowledge, and TLTK – Teaching and Learning and Technology Knowledge. The teacher's MTK guides her decisions, leading her to focus on helping students understand the meaning of conjecture and proof, valuing, at the same time, the relevance of algebraic manipulations. However, the teacher’s TLTK guides her practice, where the knowledge about the students is determinant. The study provides evidence about the difficulty of articulating proof and technology, but it also clarifies the relevance of this articulation and of how the teacher’s KTMT can impact the teacher’s decisions.

Raimundo, R., A. Coelho, R. Martins, and I. Catarino. "Power generation by unhealthy photovoltaic modules." CIGRE Science and Engineering . 28 (2023).
Crespo, Vicente D., Cristina Sequero López, Maria Rios, Darío Estraviz López, Arturo Gamonal, Roberta Martino, Marc Riccetto, Pedro Callapez, Paulo Legoinha, and Octávio Mateus. "Revisiting the classical small mammal assemblage from the Eocene site of Silveirinha: a fresh look at old collections." XI Congresso Nacional de Geologia: Geociências e Desafios globaisAt: Universidade de CoimbraVolume: Livro de Resumos, págs 85-86. Coimbra 2023. Abstractcrespov_etal_xicng2023_silveirinha.pdf

O sítio de Silveirinha é uma das localidades de mamíferos mais conhecidas da Paleontologia do Cenozoico de Portugal e da Europa em geral. Graças à sua rica e diversificada associação de mamíferos, com mais de 30 taxa, foi posicionado no Eocénico inferior (início do Ypresiano, MP7, ca. 55,8 M.a.), sendo o local mais antigo da Europa desta Época, devido à presença única de taxa típicos do Paleocénico superior, juntamente com outras espécies já características do Eocénico inferior. Este estudo irá rever o material de pequenos mamíferos deste sítio, conservado na coleção clássica da Universidade Nova de Lisboa, a fim de fazer uma actualização taxonómica à luz das publicações mais recentes.

Rodrigues, Alexandra P., Pedro M. P. Santos, João Pedro Veiga, Maria Helena Casimiro, and Luís M. Ferreira. "Electron Beam Irradiation on the Production of a Si- and Zr-Based Hybrid Material: A Study by FTIR and WDXRF." Materials. 16 (2023). AbstractWebsite

Sol-gel production of hybrid materials has, to some extent, revolutionised materials’ engineering and the way science and technology perceive the creation of new materials. Despite that, the method presents some limitations that are circumvented by radiation processing. Electron beam irradiation was used to promote synthesis of hybrid structures while using silanol-terminated PDMS, TEOS and TPOZ as precursors. Evaluation of the method’s performance was executed by gel fraction determination, WDXRF and FTIR-ATR. Results showed that, although there is some pre-irradiation reactivity between precursors, radiolysis induces scission on multiple sites of precursor’s structures, which induces hybrid network formation to a greater extent. Characterisation allowed determining electron beam irradiation to be effective in the creation of Si–O–Zr bonds, resulting in the production of a Class II hybrid material.

Dias, Ana Margarida Gonçalves Carvalho, Inês Pimentel Moreira, Iana Lychko, Cátia Lopes Soares, Arianna Nurrito, Arménio Jorge Moura Barbosa, Viviane Lutz-Bueno, Raffaele Mezzenga, Ana Luísa Carvalho, Ana Sofia Pina, and Ana Cecília Afonso Roque. "Hierarchical self-assembly of a reflectin-derived peptide." Frontiers in Chemistry. 11 (2023). AbstractWebsite

Reflectins are a family of intrinsically disordered proteins involved in cephalopod camouflage, making them an interesting source for bioinspired optical materials. Understanding reflectin assembly into higher-order structures by standard biophysical methods enables the rational design of new materials, but it is difficult due to their low solubility. To address this challenge, we aim to understand the molecular self-assembly mechanism of reflectin’s basic unit—the protopeptide sequence YMDMSGYQ—as a means to understand reflectin’s assembly phenomena. Protopeptide self-assembly was triggered by different environmental cues, yielding supramolecular hydrogels, and characterized by experimental and theoretical methods. Protopeptide films were also prepared to assess optical properties. Our results support the hypothesis for the protopeptide aggregation model at an atomistic level, led by hydrophilic and hydrophobic interactions mediated by tyrosine residues. Protopeptide-derived films were optically active, presenting diffuse reflectance in the visible region of the light spectrum. Hence, these results contribute to a better understanding of the protopeptide structural assembly, crucial for the design of peptide- and reflectin-based functional materials.

Díaz, Rafael Sanabria, Brisid Isufi, Leandro Mouta Trautwein, and António Pinho Ramos. "Nonlinear analysis of flat slab-column connections to optimize the use of HPFRC under monotonic vertical loading." Structural Concrete. 24 (2023): 5787-5807. AbstractWebsite
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Gonçalves, Rodrigo, David Henriques, Armando Antão, and Manuel Ritto-Corrêa. "On non-uniform plastic torsion of steel I-section cantilevers." Thin-Walled Structures. 187 (2023): 110731. AbstractWebsite

This paper aims at contributing towards a better understanding of the non-uniform elastoplastic torsion mechanism of I-section beams. The particular case of cantilevers subjected to an end torque is analysed, which constitutes a simple yet interesting problem, since the maximum torque is very close to the so-called Merchant upper bound (MUB), with added independent maximum bishear and Saint-Venant torques. Consequently, it turns out that the maximum torque can be significantly higher than that for uniform plastic torsion. Besides the MUB, several solutions are presented and compared, namely (i) a stress resultant-based solution stemming from the warping beam theory differential equilibrium equation and (ii) solutions obtained with several beam finite elements that allow for a coarse/refined description of warping. It is found that all models are in very close agreement in terms of maximum torque (including the MUB) and stress resultants. However, the beam finite elements that allow for bishear, even with a simplified warping function, are further capable of reproducing quite accurately the stress field, as a comparison with a 3D solid finite element solution shows. Although the paper is primarily concerned with the small displacement case, the influence of considering finite rotations is also addressed.

Pinheiro, A., A. Ruivo, J. Rocha, M. Ferro, JV Pinto, J. Deuermeier, T. Mateus, A. Santa, MJ Mendes, R. Martins, S. Gago, C. A. T. Laia, and H. Águas. "Parylene-Sealed Perovskite Nanocrystals Down-Shifting Layer for Luminescent Spectral Matching in Thin Film Photovoltaics." Nanomaterials. 13 (2023). AbstractWebsite
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Rogério, Flávio, Armando Antão N. Nuno M. C. Guerra, and Manuel Matos Fernandes. "PROBABILIDADE DE ROTURA DE TALUDES DE ESCAVAÇÃO DIMENSIONADOS DE ACORDO COM O EUROCÓDIGO 7. ESTUDO EXPLORATÓRIO." 2023. Abstract
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Rotatori, FM, A. A. Chiarenza, M. Moreno-Azanza, and O. Mateus Rise of a dinasty: macroevolutionary and biogeographic patterns of iguanodontian dinosaurs across the Jurassic–Cretaceous transition. EAVP Annual Conference of the European Association of Vertebrate Palaeontologists. Palaeovertebrata, Special Volume 1-23. DOI: 10.18563/pv.eavp2023, 2023. Abstract
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Ramos, António, Brisid Isufi, and Rui Marreiros. "SEISMIC BEHAVIOR OF SLAB–COLUMN CONNECTIONS USING HIGH PERFORMANCE FIBER REINFORCED CONCRETES." American Concrete Institute, ACI Special Publication. Vol. SP-357. 2023. 123-138. Abstract
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Ramos, António Pinho, Brisid Isufi, Rui Marreiros, Dario Coronelli, Teresa Netti, Marco Lamperti Tornaghi, Georgios Tsionis, and Aurelio Muttoni. "Seismic Performance of Strengthened Slab-Column Connections in a Full-Scale Test." Journal of Earthquake Engineering. 27 (2023): 2299-2318. AbstractWebsite
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Nóbrega, Cláudia S., Ana Luísa Carvalho, Maria João Romão, and Sofia R. Pauleta. "Structural Characterization of Neisseria gonorrhoeae Bacterial Peroxidase—Insights into the Catalytic Cycle of Bacterial Peroxidases." International Journal of Molecular Sciences. 24 (2023). AbstractWebsite

Neisseria gonorrhoeae is an obligate human pathogenic bacterium responsible for gonorrhea, a sexually transmitted disease. The bacterial peroxidase, an enzyme present in the periplasm of this bacterium, detoxifies the cells against hydrogen peroxide and constitutes one of the primary defenses against exogenous and endogenous oxidative stress in this organism. The 38 kDa heterologously produced bacterial peroxidase was crystallized in the mixed-valence state, the active state, at pH 6.0, and the crystals were soaked with azide, producing the first azide-inhibited structure of this family of enzymes. The enzyme binds exogenous ligands such as cyanide and azide, which also inhibit the catalytic activity by coordinating the P heme iron, the active site, and competing with its substrate, hydrogen peroxide. The inhibition constants were estimated to be 0.4 ± 0.1 µM and 41 ± 5 mM for cyanide and azide, respectively. Imidazole also binds and inhibits the enzyme in a more complex mechanism by binding to P and E hemes, which changes the reduction potential of the latest heme. Based on the structures now reported, the catalytic cycle of bacterial peroxidases is revisited. The inhibition studies and the crystal structure of the inhibited enzyme comprise the first platform to search and develop inhibitors that target this enzyme as a possible new strategy against N. gonorrhoeae.

Duarte, Marlene, Victor D. Alves, Márcia Correia, Catarina Caseiro, Luís M. A. Ferreira, Maria João Romão, Ana Luísa Carvalho, Shabir Najmudin, Edward A. Bayer, Carlos M. G. A. Fontes, and Pedro Bule. "Structure-function studies can improve binding affinity of cohesin-dockerin interactions for multi-protein assemblies." International Journal of Biological Macromolecules. 224 (2023): 55-67. AbstractWebsite

The cellulosome is an elaborate multi-enzyme structure secreted by many anaerobic microorganisms for the efficient degradation of lignocellulosic substrates. It is composed of multiple catalytic and non-catalytic components that are assembled through high-affinity protein-protein interactions between the enzyme-borne dockerin (Doc) modules and the repeated cohesin (Coh) modules present in primary scaffoldins. In some cellulosomes, primary scaffoldins can interact with adaptor and cell-anchoring scaffoldins to create structures of increasing complexity. The cellulosomal system of the ruminal bacterium, Ruminococcus flavefaciens, is one of the most intricate described to date. An unprecedent number of different Doc specificities results in an elaborate architecture, assembled exclusively through single-binding-mode type-III Coh-Doc interactions. However, a set of type-III Docs exhibits certain features associated with the classic dual-binding mode Coh-Doc interaction. Here, the structure of the adaptor scaffoldin-borne ScaH Doc in complex with the Coh from anchoring scaffoldin ScaE is described. This complex, unlike previously described type-III interactions in R. flavefaciens, was found to interact in a dual-binding mode. The key residues determining Coh recognition were also identified. This information was used to perform structure-informed protein engineering to change the electrostatic profile of the binding surface and to improve the affinity between the two modules. The results show that the nature of the residues in the ligand-binding surface plays a major role in Coh recognition and that Coh-Doc affinity can be manipulated through rational design, a key feature for the creation of designer cellulosomes or other affinity-based technologies using tailored Coh-Doc interactions.