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2021
Boretzky, K., I. Gasparic, M. Heil, J. Mayer, A. Heinz, C. Caesar, D. Kresan, H. Simon, H. T. Törnqvist, D. Körper, G. Alkhazov, L. Atar, T. Aumann, D. Bemmerer, S. V. Bondarev, L. T. Bott, S. Chakraborty, M. I. Cherciu, L. V. Chulkov, M. Ciobanu, U. Datta, E. De Filippo, C. A. Douma, J. Dreyer, Z. Elekes, J. Enders, D. Galaviz, E. Geraci, B. Gnoffo, K. Göbel, V. L. Golovtsov, Gonzalez D. Diaz, N. Gruzinsky, T. Heftrich, H. Heggen, J. Hehner, T. Hensel, E. Hoemann, M. Holl, A. Horvat, Á. Horváth, G. Ickert, Jelavić D. Malenica, H. T. Johansson, B. Jonson, J. Kahlbow, N. Kalantar-Nayestanaki, A. Kelic-Heil, M. Kempe, K. Koch, N. G. Kozlenko, A. G. Krivshich, N. Kurz, V. Kuznetsov, C. Langer, Y. Leifels, I. Lihtar, B. Löher, J. Machado, N. S. Martorana, K. Miki, T. Nilsson, E. M. Orischin, E. V. Pagano, S. Pirrone, G. Politi, P. M. Potlog, A. Rahaman, R. Reifarth, C. Rigollet, M. Röder, D. M. Rossi, P. Russotto, D. Savran, H. Scheit, F. Schindler, D. Stach, E. Stan, Stomvall J. Gill, P. Teubig, M. Trimarchi, L. Uvarov, M. Volknandt, S. Volkov, A. Wagner, V. Wagner, S. Wranne, D. Yakorev, L. Zanetti, A. Zilges, K. Zuber, and R. 3B. collaboration. "{NeuLAND: The high-resolution neutron time-of-flight spectrometer for R3B at FAIR}." Nuclear Inst. and Methods in Physics Research, A. 1014 (2021): 165701. AbstractWebsite

Nuclear Inst. and Methods in Physics Research, A, 1014 (2021) 165701. doi:10.1016/j.nima.2021.165701

2020
Ehrenbolger, Kai, Nathan Jespersen, Himanshu Sharma, Yuliya Y. Sokolova, Yuri S. Tokarev, Charles R. Vossbrinck, and Jonas Barandun. "Differences in structure and hibernation mechanism highlight diversification of the microsporidian ribosome." PLOS Biology. 18 (2020): e3000958. AbstractWebsite
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Syndikus, I., M. Petri, A. O. Macchiavelli, S. Paschalis, C. A. Bertulani, T. Aumann, H. Alvarez-Pol, L. Atar, S. Beceiro-Novo, J. Benlliure, J. M. Boillos, K. Boretzky, M. J. G. Borge, B. A. Brown, M. Caamano, C. Caesar, E. Casarejos, W. Catford, J. Cederkäll, S. Chakraborty, L. V. Chulkov, D. Cortina-Gil, E. Cravo, R. Crespo, Datta U. Pramanik, I. Dillmann, Diaz P. Fernandez, Z. Elekes, J. Enders, F. Farinon, L. M. Fraile, D. Galaviz, H. Geissel, R. Gernhäuser, P. Golubev, K. Göbel, M. Heil, M. Heine, A. Heinz, A. Henriques, M. Holl, H. T. Johansson, B. Jonson, N. Kalantar-Nayestanaki, R. Kanungo, A. Kelic-Heil, T. Kröll, N. Kurz, C. Langer, T. Le Bleis, J. Machado, J. Marganiec-Gałązka, E. Nacher, T. Nilsson, C. Nociforo, V. Panin, A. Perea, S. B. Pietri, R. Plag, A. Rahaman, R. Reifarth, A. Revel, G. Ribeiro, C. Rigollet, D. M. Rossi, D. Savran, H. Scheit, H. Simon, O. Sorlin, O. Tengblad, Y. Togano, M. Vandebrouck, V. Volkov, F. Wamers, C. Wheldon, G. L. Wilson, J. S. Winfield, H. Weick, P. Woods, D. Yakorev, M. Zhukov, A. Zilges, K. Zuber, and R. 3B. collaboration. "{Probing the Z=6 spin-orbit shell gap with (p,2p) quasi-free scattering reactions}." Physics Letters B. 809 (2020): 135748. AbstractWebsite

Physics Letters B, 809 (2020) 135748. 10.1016/j.physletb.2020.135748

Esquível, M. L., NP Krasii, and P. Mota. "Auto and Externally Induced Regime Switching Diffusions." Communications On Stochastic Analysis. 14.1-2 (2020): 27-47. AbstractWebsite

In the current literature we can find mainly two approaches to the
SDE regime switching modeling. The traditional one, the externally induced
regime switching diffusions is described by the switching being derived from
a separate continuous time Markov process, with a finite, or denumerable,
state space { indexing the regimes { the random times of the regime switches
being exactly the jump times of the finite valued Markov process. There is a
first alternative approach in which the regime switching occurs whenever the
trajectory enters in some prescribed region on the state space; the regions we
consider will be mainly open intervals defined by unknown thresholds for the
trajectories; thresholds that, in principle, should also be estimated. In this
approach the partitioning of the the state space is already defined in the drift
and volatility of the SDE. In a second alternative approach the switching occurs
in a random way but at some random times defined when the trajectories hit
some prescribed thresholds, that again, must be estimated. We may designate
these two alternative approaches as auto-induced regime switching diffusions
as there is no external noise source to force the switching occurrence. We prove
a generalization of an existence result of the existence of auto-induced regime
switching SDE solutions for irregular coefficients and a result that encompasses
some of the cases of both externally and auto-induced regime switching SDE
solutions.

Esgalhado, Filipa, Arnaldo Batista, Helena Mouriño, Sara Russo, Catarina Palma R. dos Reis, Fátima Serrano, Valentina Vassilenko, and Manuel Ortigueira. "Automatic Contraction Detection Using Uterine Electromyography." Applied Sciences. 10.20 (2020): 14.
Esquível, Manuel L., Paula Patrício, and Gracinda R. Guerreiro. "From ODE to Open Markov Chains, via SDE: an application to models for infections in individuals and populations." Computational and Mathematical Biophysics. 8 (2020): 180-197.
Esgalhado, Filipa, Arnaldo Batista, Helena Mouriño, Sara Russo, Catarina Palma dos Reis, Fátima Serrano, Valentina Vassilenko, and Manuel Ortigueira. "Uterine contractions clustering based on electrohysterography." Computers in Biology and Medicine. 123.June (2020).
Jackson, Yasmin Jamalia, Rita C. Economos, Louis L. Jacobs, Octávio Mateus, and António Olímpio Gonçalves When dinosaurs walked through diamonds: constraining the age of Early Cretaceous footprints in volcanic crater sediments. 54th Annual GSA South-Central Section Meeting 2020. Fort Worth: Geological Society of America Abstracts with Programs. Vol. 52, No. 1, 2020.jackson_et_al_2020_abstract__when_dinosaurs_walked_through_diamonds__gsa.pdf
2019
Pandeirada, Carolina O., Élia Maricato, Sónia S. Ferreira, Viviana G. Correia, Benedita A. Pinheiro, Dmitry V. Evtuguin, Angelina S. Palma, Alexandra Correia, Manuel Vilanova, Manuel A. Coimbra, and Cláudia Nunes. "{Structural analysis and potential immunostimulatory activity of Nannochloropsis oculata polysaccharides.}." Carbohydrate polymers. 222 (2019): 114962. Abstract

The relevance of microalgae biotechnology for producing high-value compounds with biomedical application, such as polysaccharides, has been increasing. Despite this, the knowledge about the composition and structure of microalgae polysaccharides is still scarce. In this work, water-soluble polysaccharides from Nannochloropsis oculata were extracted, fractionated, structurally analysed, and subsequently tested in terms of immunostimulatory activity. A combination of sugar and methylation analysis with interaction data of carbohydrate-binding proteins using carbohydrate microarrays disclosed the complex structural features of the different polysaccharides. These analyses showed that the water-soluble polysaccharides fractions from N. oculata were rich in ($\beta$1→3, $\beta$1→4)-glucans, ($\alpha$1→3)-, ($\alpha$1→4)-mannans, and anionic sulphated heterorhamnans. The immunostimulatory assay highlighted that these fractions could also stimulate murine B-lymphocytes. Thus, the N. oculata water-soluble polysaccharides show potential to be further explored for immune-mediated biomedical applications.

Pacheco, João, Jorge de Brito, Carlos Chastre, and Luís Evangelista. "Reliability of the bond strength of recycled coarse aggregate concrete." Proceedings of the fib Symposium 2019: Concrete - Innovations in Materials, Design and Structures. Kraków, Poland 2019. 913-920. Abstract

An analysis on the effect of the incorporation of coarse recycled concrete aggregates on the bond strength between concrete and embedded steel reinforcement is presented. The model’s uncertainty of the Level I provision of the anchorage length of fib Bulletin 72 on ribbed steel/recycled aggregate concrete bond is quantified. Afterwards, reliability analyses on the bond strength are made and a partial safety factor for the anchorage length of recycled concrete elements is proposed. The model’s uncertainty is evaluated through data from pullout tests, the only type of bond test that has been so far performed extensively on recycled aggregate concrete specimens. The limitations of this test in reproducing the bond of actual structural elements is discussed, and the model’s uncertainty is converted to that of lap splice tests. The bond strength of recycled aggregate concrete design was found to be less reliable than that of natural aggregate concrete, especially in the absence of confining reinforcement. For concrete with full recycled aggregate incorporation, a 25% increase in the anchorage length is proposed. Additional testing on the bond strength of lapped splices or beam-end specimens is recommended.

Pacheco, João Nuno, Jorge de Brito, Carlos Chastre, and Luís Evangelista. "Towards the structural codification of recycled aggregate concrete." UKIERI Concrete Congress. Concrete: The Global Builder. Jalandhar, Punjab, India 2019. Abstract

This paper analyses the studies made so far on the variability and reliability of recycled aggregate concrete. Since recycled aggregate concrete is seen by different agents of the construction industry as a variable material and no structural code has specifically been calibrated to its use, its role as a structural material is limited. Such calibration is hindered since specific research on the statistical and probabilistic data of recycled aggregate concrete properties is lacking.Investigations on the probabilistic knowledge of recycled aggregates and recycled aggregate concrete properties are discussed, and the studies made so far on the reliability of recycled aggregate concrete elements are summarised. Final remarks regarding the future prospects towards the consensual acceptance of recycled aggregate concrete structures are provided.

Pacheco, João Nuno, Jorge de Brito, Carlos Chastre, and Luís Evangelista. "Scatter of constitutive models of the mechanical properties of concrete: comparison of major international codes." Journal of Advanced Concrete Technology. 17 (2019): 102-125. AbstractWebsite

An investigation on the scatter of code-type constitutive models that relate compressive strength (fc) with tensile strength (fct) and Young’s modulus (Ec) of standard concrete specimens is presented. The influence of the mix design on the accuracy of the fc vs. fct and fc vs. Ecrelationships is discussed, with emphasis on the lithological type and morphology of the coarse aggregates. The uncertainty of the constitutive models is analysed in probabilistic terms and random variables that model the uncertainty of the fc vs. fct and fc vs. Ec relationships are proposed for reliability analyses of serviceability limit states. The suitability of the models proposed is assessed through preliminary conservative estimates of their design values.

Pacheco, João Nuno, Jorge de Brito, Carlos Chastre, and Luís Evangelista. "Statistical analysis of Portuguese ready-mixed concrete production." Construction and Building Materials. 209 (2019): 283-294. AbstractWebsite

This paper evaluates and compares the statistics of compressive strength data from three Portuguese ready-mixed concrete plants. A hierarchical model showed that different groups of concrete strength records are not statistically equivalent, even if they were produced in the same plant and using the same concrete composition. This finding is related to autocorrelation. For the same specified strength class, compositions produced less often result in higher average compressive strength and variability. The statistics of one of the plants were quite different from those of the others, even though the concrete of this plant also complied with the specifications. It was found that the average compressive strength of a mix may be quite dependent on the plant that produced it, even if the compressive strength complies with quality control specifications. Conformity with the target slump and strength class was checked following the conformity criteria of EN 206-1 for continuous production. Nonconformity with slump is more frequent than failure to comply with the strength class. A bias factor for reliability analyses was proposed.

Pacheco, J., J. de Brito, C. Chastre, and L. Evangelista. "Uncertainty models of reinforced concrete beams in bending: code comparison and recycled aggregate incorporation." Journal of Structural Engineering. 145 (2019): 04019013. AbstractWebsite

The bias factor of the Eurocode 2 [CEN (European Committee for Standardization) (2008). Eurocode 2: Design of ConcreteStructures–Part 1-1: General Rules and Rules for Buildings] and ACI 318 [ACI (American Concrete Institute) (2014). Building CodeRequirements for Structural Concrete and Commentary] flexural resistance models of reinforced concrete beams are compared withemphasis on the effect of the incorporation of coarse recycled aggregates sourced from concrete waste. The bias factor of the yielding momentcalculations according to both codes is also investigated, and the bias in the cracking moment when Eurocode 2 material clauses are used. Thedatabase was composed of 174 beams, and the criteria that led to its development are discussed. The effect of recycled aggregate incorporationon the statistical descriptors of the bias factor is evaluated and probabilistic modeling using lognormal distributions is argued for. Preliminarypartial safety factors for the bias factor of recycled aggregate concrete beams are proposed. No significant differences in the bias of theultimate moment were found between the two comparison vectors: Eurocode 2 versus ACI 318 specifications and recycled versus naturalcoarse aggregate. The bias of the cracking moment increased when coarse recycled aggregates were incorporated, most probably due to thehigher heterogeneity of recycled aggregates.

Pacheco, J., J. de Brito, C. Chastre, and L. Evangelista. "Experimental investigation on the variability of the main mechanical properties of concrete produced with coarse recycled concrete aggregates." Construction and Building Materials. 201 (2019): 110-120. AbstractWebsite

Research on the variability of the properties of recycled aggregate concrete is lacking and is necessary for the development of reliability analyses and code calibration procedures. This paper presents an experimental programme on the within-batch variability of the compressive strength, Young’s modulus, and splitting tensile strength of several recycled and natural aggregate concrete mixes. The influence of the recycled concrete aggregates on the mechanical properties and variability of concrete is analysed and discussed and benchmarks with standard predictions for the variability of natural aggregate concrete are made. It was found that full recycled aggregate concrete incorporation did not increase the variability of any of the properties tested, but intermediate ratios of recycled aggregate incorporation did. The properties of high-strength concrete mixes were more variable than that of all other mixes, irrespective of recycled aggregate incorporation. All properties of all compositions were suitably modelled by normal distributions. The coarse recycled aggregates were sourced from concrete waste.

Baptista, S., A. P. Barbosa-Póvoa, L. Escudero, M. I. Gomes, and Pizarro, C. "On risk management of a two-stage stochastic mixed 0-1 model for the closed-loop supply chain design problem." European Journal of Operational Research. 274.1 (2019): 91-107. AbstractWebsite

In this work, the design and operation planning of a multi-period, multi-product closed-loop supply chain is addressed. Recovered end-of-life products from customers are evaluated in disassembly centers and accordingly are sent back to factories for remanufacturing, or leave the network either by being sold to third parties or by being sent to disposal. Typical uncertain parameters are product demand, production cost, and returned product volume and evaluation, among others. So, stochastic optimization approaches should be used for problem solving, where different topology decisions on the timing, location and capacity of some entities (factories, and distribution and sorting centers) are to be considered along a time horizon. A two-stage multi-period stochastic mixed 0–1 bilinear optimization model is introduced, where the combined definition of the available entities at the periods and the products’ flow among the entities, maximizes the net present value of the expected total profit along the time horizon. A version of the mixture of chance-constrained and second order stochastic dominance risk averse measures is considered for risk management at intermediate periods of the time horizon. Given the high dimensions of the model it is unrealistic to look for the optimality of the solution in an affordable computing effort for current hardware and optimization software resources. So, a decomposition approach is considered, namely a Fix-and-Relax decomposition algorithm. For assessing the computational validation of the modeling and algorithmic proposals, pilot cases are taken from a real-life glass supply chain network whose main features are retained.

Bedon, Chiara, Dániel Honfi, Klára V. Machalická, Martina Eliášová, Miroslav Vokáč, Marcin Kozłowski, Thomas Wüest, Filipe Amarante dos Santos, and Natalie Williams Portal. "Structural characterisation of adaptive facades in Europe - Part II: Validity of conventional experimental testing methods and key issues." Journal of Building Engineering. 25 (2019).
Bedon, Chiara, Dániel Honfi, Klára V. Machalická, Martina Eliášová, Miroslav Vokáč, Marcin Kozłowski, Thomas Wüest, Filipe Amarante dos Santos, and Natalie Williams Portal. "Structural characterisation of adaptive facades in Europe – Part I: Insight on classification rules, performance metrics and design methods." Journal of Building Engineering. 25 (2019).
Pacheco, João Nuno, Jorge de Brito, Carlos Chastre, and Luís Evangelista. "Probabilistic Conversion of the Compressive Strength of Cubes to Cylinders of Natural and Recycled Aggregate Concrete Specimens." Materials. 12 (2019): 280. AbstractWebsite

This paper investigates the effect of recycled coarse aggregate incorporation on the relationship between 150 mm cubic and Փ 150 mm cylindrical compressive strength (the reference strength of standards) by comparing data from recycled and natural aggregate concrete compositions in which both cubes and cylinders were tested. A conversion factor from cubic to cylindrical strength is proposed in two versions: A deterministic and a probabilistic one. Such factor has not been studied before and researchers have been converting cubic data as if natural aggregate concrete were tested. The probabilistic factor is intended for reliability analyses on the structural behaviour of recycled aggregate concrete using data from laboratory cube tests. It was found that the incorporation of recycled coarse aggregates sourced from concrete waste significantly decreases the expected value of the factor but the factor’s scatter is relatively unaffected.

Bedon, C., D. Honfi, K. V. Machalická, M. Eliášová, M. Vokáč, M. Kozłowski, T. Wüest, F. Santos, and N. W. Portal. "Structural characterisation of adaptive facades in Europe - Part II: Validity of conventional experimental testing methods and key issues." Journal of Building Engineering. 25 (2019). AbstractWebsite
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Bedon, C., D. Honfi, K. V. Machalická, M. Eliášová, M. Vokáč, M. Kozłowski, T. Wüest, F. Santos, and N. W. Portal. "Structural characterisation of adaptive facades in Europe – Part I: Insight on classification rules, performance metrics and design methods." Journal of Building Engineering. 25 (2019). AbstractWebsite
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Holl, M., V. Panin, H. Alvarez-Pol, L. Atar, T. Aumann, S. Beceiro-Novo, J. Benlliure, C. A. Bertulani, J. M. Boillos, K. Boretzky, M. Caamano, C. Caesar, E. Casarejos, W. Catford, J. Cederkäll, L. Chulkov, D. Cortina-Gil, E. Cravo, I. Dillmann, Diaz P. Fernandez, Z. Elekes, J. Enders, L. M. Fraile, Galaviz D. Redondo, R. Gernhäuser, P. Golubev, T. Heftrich, M. Heil, M. Heine, A. Heinz, A. Henriques, H. T. Johansson, B. Jonson, N. Kalantar-Nayestanaki, R. Kanungo, A. Kelic-Heil, T. Kröll, N. Kurz, C. Langer, T. Le Bleis, S. Lindberg, J. Machado, E. Nacher, M. A. Najafi, T. Nilsson, C. Nociforo, S. Paschalis, M. Petri, R. Reifarth, G. Ribeiro, C. Rigollet, D. M. Rossi, D. Savran, H. Scheit, H. Simon, O. Sorlin, I. Syndikus, O. Tengblad, Y. Togano, M. Vandebrouck, P. Velho, F. Wamers, H. Weick, C. Wheldon, G. L. Wilson, J. S. Winfield, P. Woods, M. Zhukov, K. Zuber, and R. 3B. collaboration. "{Quasi-free neutron and proton knockout reactions from light nuclei in a wide neutron-to-proton asymmetry range}." Physics Letters B. 795 (2019): 682-688. AbstractWebsite

Physics Letters B, 795 (2019) 682–688. 10.1016/j.physletb.2019.06.069

2018
Carvalho, Ana Luísa, Teresa Santos-Silva, Maria João Romão, J. Eurico, and Filipa Marcelo. "{CHAPTER 2 Structural Elucidation of Macromolecules}." Essential Techniques for Medical and Life Scientists: A Guide to Contemporary Methods and Current Applications with the Protocols. BENTHAM SCIENCE PUBLISHERS, 2018. 30-91. Abstract

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