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2013
Trindade, Ana C., João P. Canejo, Paulo IC Teixeira, Pedro Patrício, and Maria H. Godinho. "First curl, then wrinkle." Macromolecular rapid communications. 34.20 (2013): 1618-1622. Abstract
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Bahubalindruni, Pydi, Vitor Grade Tavares, Pedro Barquinha, Rodrigo Martins, and Elvira Fortunato High-Gain Topologies for Transparent Electronics. Eds. I. Kuzle, T. Capuder, and H. Pandzic. 2013 Ieee Eurocon., 2013. AbstractWebsite
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Trübenbach, K., T. Teixeira, M. Diniz, and R. Rosa. "Hypoxia tolerance and antioxidant defense system of juvenile jumbo squids in oxygen minimum zones." Deep-Sea Research Part II: Topical Studies in Oceanography. 95 (2013): 209-217. AbstractWebsite
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Mehtab, S., G. Gon?alves, S. Roy, A. I. Tomaz, T. Santos-Silva, M. F. A. Santos, MJ Romão, T. Jakusch, T. Kiss, and JC Pessoa. "Interaction of vanadium(IV) with human serum apo-transferrin." Journal of Inorganic Biochemistry. 121 (2013): 187-195. Abstract
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Elisa, M. a, B. A. a Sava, I. C. a Vasiliu, R. C. C. b Monteiro, C. R. a Iordanescu, I. D. a Feraru, L. a Ghervase, C. c Tanaselia, M. c Senila, and B. c Abraham. "Investigations on optical, structural and thermal properties of phosphate glasses containing terbium ions." IOP Conference Series: Materials Science and Engineering. Vol. 47. 2013. Abstract

{Aluminophosphate glasses belonging to the Li2O-BaO-Al 2O3- La2O3-P2O 5 system doped with Tb3+ were prepared and investigated. Methods as Induced Coupled Plasma-Mass Spectrometry (ICP-MS), Induced Coupled Plasma-Atomic Emission Spectroscopy (ICP-AES) and X-ray diffraction (XRD) have been used to establish the elemental composition of these vitreous materials. The influence of the Tb3+ ions on the optical properties of the phosphate glasses has been investigated in relation with the structural characteristics of the vitreous matrix. The optical behavior has been studied by ultra-violet-visible (UV-Vis) spectroscopy, revealing electronic transitions specific for terbium ions. Fluorescence spectroscopy measurements have been performed by excitation in the UV and visible domains (377 nm and 488 nm) which resulted in the most significant fluorescence peaks in the Vis domain (540 and 547 nm). Structural information via vibration modes were provided by Fourier Transform Infrared (FTIR) absorption spectra in the 400-4000 cm-1 range. Absorption peaks specific for the vitreous phosphate matrix were put in evidence as P-O-P symmetrical and asymmetrical stretching vibration modes, P-O-P bend, PO2- symmetrical and asymmetrical stretching vibration modes

Santos-Silva, Teresa, Marangon J, Correia HD, Brondino CD, Moura JJ, Romão MJ, González PJ, and Santos-Silva T. "Kinetic and structural studies of aldehyde oxidoreductase from Desulfovibrio gigas reveal a dithiolene-based chemistry for enzyme activation and inhibition by H(2)O(2)." (2013). AbstractWebsite
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Faita, FL, AC Trindade, M. H. Godinho, and IH Bechtold. "Luminescent elastomeric Janus particles." Journal of colloid and interface science. 410 (2013): 124-130. Abstract
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Trindade, Ana C., João P. Canejo, Paulo IC Teixeira, Pedro Patrício, and Maria H. Godinho. "Macromol. Rapid Commun. 20/2013." Macromolecular rapid communications. 34.20 (2013): 1589. Abstract
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da Teresa Pereira, Silva, Figueiredo Maria-Ondina, Oliveira de Daniel, Veiga João Pedro, and Batista Maria João. "Molybdenite as a Rhenium Carrier: First Results of a Spectroscopic Approach Using Synchrotron Radiation." Journal of Minerals and Materials Characterization and Engineering. 2013 (2013). Abstract
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Teixeira, S. S., C. J. Dias, M. Dionisio, and L. C. Costa. "New method to analyze dielectric relaxation processes: A study on polymethacrylate series." Polymer International. 62 (2013): 1744-1749. AbstractWebsite
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Kasthurirangan, S., J. K. Saha, A. N. Agnihotri, S. Bhattacharyya, D. Misra, A. Kumar, P. K. Mukherjee, J. P. Santos, A. M. Costa, P. Indelicato, T. K. Mukherjee, and L. C. Tribedi. "Observation of 2p3 d (1Po)→ 1s3d (1De) Radiative Transition in He-like Si, S, and Cl Ions." Physical Review Letters. 111 (2013): 243201. AbstractWebsite
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Kasthurirangan, S., J. K. Saha, A. N. Agnihotri, S. Bhattacharyya, D. Misra, A. Kumar, P. K. Mukherjee, J. P. Santos, A. M. Costa, P. Indelicato, T. K. Mukherjee, and L. C. Tribedi. "Observation of 2p3 d (1Po)→ 1s3d (1De) Radiative Transition in He-like Si, S, and Cl Ions." Physical Review Letters. 111 (2013): 243201. AbstractWebsite
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Lopes, A. R., K. Trübenbach, T. Teixeira, V. M. Lopes, V. Pires, M. Baptista, T. Repolho, R. Calado, M. Diniz, and R. Rosa. "Oxidative stress in deep scattering layers: Heat shock response and antioxidant enzymes activities of myctophid fishes thriving in oxygen minimum zones." Deep-Sea Research Part I: Oceanographic Research Papers. 82 (2013): 10-16. AbstractWebsite
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Palma, Angelina S., Benedita Pinheiro, Yan Liu, Yoichi Takeda, Wengang Chai, Yukishige Ito, Maria Joao Romao, Ana Luisa Carvalho, and Ten Feizi. "The Structural Basis of the Recognition of Di-glucosylated N-glycans by the ER Lectin Malectin." Glycobiology. 23 (2013): 1368-1369. Abstract
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Fernandes, Susete N., Yong Geng, Silvia Vignolini, Beverley J. Glover, Ana C. Trindade, João P. Canejo, Pedro L. Almeida, Pedro Brogueira, and Maria H. Godinho. "Structural color and iridescence in transparent sheared cellulosic films." Macromolecular Chemistry and Physics. 214.1 (2013): 25-32. Abstract
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Teixeira, Paulo, Susete N. Fernandes, João Canejo, Maria Helena Godinho, Catarina Leal, and Loic Hilliou. "When Liquid Crystalline Cellulose Flows and Relaxes." Ibereo 2013 (2013). Abstract
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Gawande, Manoj B., Anuj K. Rathi, Paula S. Branco, T. M. Potewar, Alexandre Velhinho, Isabel D. Nogueira, Alexander Tolstoguzov, Amjad C. A. Ghumman, and Orlando M. N. D. Teodoro. "{Nano-MgO-ZrO2 Mixed Metal oxides: Characterization by SIMS and application in the reduction of carbonyl compounds and in multicomponent reactions}." RSC Advances. 3 (2013): 3611-3617. Abstract

A nano-sized Magnesia–Zirconia (nano-MgO–ZrO2) catalyst was prepared by a simple ultradilution co-precipitation method and by using inexpensive precursors. The nano-MgO–ZrO2 was extensively characterized by SIMS together with other analytical techniques such as X-ray diffraction (XRD) and transmission electron microscopy (TEM). The nano-MgO–ZrO2 catalyst proved to be very efficient for the reduction of carbonyl compounds and multicomponent reactions under mild reaction conditions. The recyclability and reusability of the nano-MgO–ZrO2 catalyst has been tested.

Mendes, Manuel J., Estela Hernández, Esther López, Pablo García-Linares, Iñigo Ramiro, Irene Artacho, Elisa Antolín, Ignacio Tobías, Antonio Martí, and Antonio Luque. "{Self-organized colloidal quantum dots and metal nanoparticles for plasmon-enhanced intermediate-band solar cells}." Nanotechnology. 24 (2013): 345402. AbstractWebsite

A colloidal deposition technique is presented to construct long-range ordered hybrid arrays of self-assembled quantum dots and metal nanoparticles. Quantum dots are promising for novel opto-electronic devices but, in most cases, their optical transitions of interest lack sufficient light absorption to provide a significant impact in their implementation. A potential solution is to couple the dots with localized plasmons in metal nanoparticles. The extreme confinement of light in the near-field produced by the nanoparticles can potentially boost the absorption in the quantum dots by up to two orders of magnitude. In this work, light extinction measurements are employed to probe the plasmon resonance of spherical gold nanoparticles in lead sulfide colloidal quantum dots and amorphous silicon thin-films. Mie theory computations are used to analyze the experimental results and determine the absorption enhancement that can be generated by the highly intense near-field produced in the vicinity of the gold nanoparticles at their surface plasmon resonance. The results presented here are of interest for the development of plasmon-enhanced colloidal nanostructured photovoltaic materials, such as colloidal quantum dot intermediate-band solar cells.

Machado, J., A. Blanco, P. Fonte, D. Galaviz, L. Lopes, Ferreira R. Marques, and P. Teubig. "{Simulations of a new detection concept for high-energy neutrons based on timing RPCs}." Journal of Instrumentation. 8 (2013): P07020. AbstractWebsite
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Martí, Antonio, Elisa Antolín, Pablo {García Linares}, Iñigo Ramiro, Irene Artacho, Esther López, Estela Hernández, Manuel J. Mendes, Alex Mellor, Ignacio Tobías, David {Fuertes Marrón}, Cesar Tablero, Ana B. Cristóbal, Christopher G. Bailey, Maria Gonzalez, Michael Yakes, Mathew P. Lumb, Robert Walters, and Antonio Luque. "{Six not-so-easy pieces in intermediate band solar cell research}." Journal of Photonics for Energy. 3 (2013): 31299. AbstractWebsite

Abstract.  The concept of intermediate band solar cell (IBSC) is, apparently, simple to grasp. However, since the idea was proposed, our understanding has improved and some concepts can now be explained more clearly than when the concept was initially introduced. Clarifying these concepts is important, even if they are well known for the advanced researcher, so that research efforts can be driven in the right direction from the start. The six pieces of this work are: Does a miniband need to be formed when the IBSC is implemented with quantum dots? What are the problems for each of the main practical approaches that exist today? What are the simplest experimental techniques to demonstrate whether an IBSC is working as such or not? What is the issue with the absorption coefficient overlap and the Mott's transition? What would the best system be, if any?

a. a. Ghumman, C., M. C. a. Moutinho, A. Santos, A. Tolstogouzov, and O. M. N. D. Teodoro. "{TOF-SIMS VG Ionex IX23LS: upgrade and application for the urinary stones analysis}." Surface and Interface Analysis. 45 (2013): 532-536. AbstractWebsite

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2012
Safari, L., P. Amaro, S. Fritzsche, J. P. Santos, S. Tashenov, and F. Fratini. "Relativistic polarization analysis of Rayleigh scattering by atomic hydrogen." Phys. Rev. A. 86 (2012): 043405. AbstractWebsite

A relativistic analysis of the polarization properties of light elastically scattered by atomic hydrogen is performed, based on the Dirac equation and second-order perturbation theory. The relativistic atomic states used for the calculations are obtained by making use of the finite basis set method and are expressed in terms of B splines and B polynomials. We introduce two experimental scenarios in which the light is circularly and linearly polarized, respectively. For each of these scenarios, the polarization-dependent angular distribution and the degrees of circular and linear polarization of the scattered light are investigated as a function of scattering angle and photon energy. Analytical expressions are derived for the polarization-dependent angular distribution which can be used for scattering by both hydrogenic as well as many-electron systems. Detailed computations are performed for Rayleigh scattering by atomic hydrogen within the incident photon energy range 0.5 to 5 keV. Particular attention is paid to the effects that arise from higher (nondipole) terms in the expansion of the electron-photon interaction.

Safari, L., P. Amaro, S. Fritzsche, J. P. Santos, S. Tashenov, and F. Fratini. "Relativistic polarization analysis of Rayleigh scattering by atomic hydrogen." Physical Review A. 86 (2012): 043405. AbstractWebsite

A relativistic analysis of the polarization properties of light elastically scattered by atomic hydrogen is performed, based on the Dirac equation and second-order perturbation theory. The relativistic atomic states used for the calculations are obtained by making use of the finite basis set method and are expressed in terms of B splines and B polynomials. We introduce two experimental scenarios in which the light is circularly and linearly polarized, respectively. For each of these scenarios, the polarization-dependent angular distribution and the degrees of circular and linear polarization of the scattered light are investigated as a function of scattering angle and photon energy. Analytical expressions are derived for the polarization-dependent angular distribution which can be used for scattering by both hydrogenic as well as many-electron systems. Detailed computations are performed for Rayleigh scattering by atomic hydrogen within the incident photon energy range 0.5 to 5 keV. Particular attention is paid to the effects that arise from higher (nondipole) terms in the expansion of the electron-photon interaction.

Pereira, AS, C. G. Timoteo, M. Guilherme, F. Folgosa, S. G. Naik, A. G. Duarte, BH HUYNH, and P. Tavares. "Spectroscopic evidence for and characterization of a trinuclear ferroxidase center in bacterial ferritin from Desulfovibrio vulgaris Hildenborough." Journal of the American Chemical Society. 134 (2012): 10822-32. AbstractWebsite

Ferritins are ubiquitous and can be found in practically all organisms that utilize Fe. They are composed of 24 subunits forming a hollow sphere with an inner cavity of ~80 A in diameter. The main function of ferritin is to oxidize the cytotoxic Fe(2+) ions and store the oxidized Fe in the inner cavity. It has been established that the initial step of rapid oxidation of Fe(2+) (ferroxidation) by H-type ferritins, found in vertebrates, occurs at a diiron binding center, termed the ferroxidase center. In bacterial ferritins, however, X-ray crystallographic evidence and amino acid sequence analysis revealed a trinuclear Fe binding center comprising a binuclear Fe binding center (sites A and B), homologous to the ferroxidase center of H-type ferritin, and an adjacent mononuclear Fe binding site (site C). In an effort to obtain further evidence supporting the presence of a trinuclear Fe binding center in bacterial ferritins and to gain information on the states of the iron bound to the trinuclear center, bacterial ferritin from Desulfovibrio vulgaris (DvFtn) and its E130A variant was loaded with substoichiometric amounts of Fe(2+), and the products were characterized by Mossbauer and EPR spectroscopy. Four distinct Fe species were identified: a paramagnetic diferrous species, a diamagnetic diferrous species, a mixed valence Fe(2+)Fe(3+) species, and a mononuclear Fe(2+) species. The latter three species were detected in the wild-type DvFtn, while the paramagnetic diferrous species was detected in the E130A variant. These observations can be rationally explained by the presence of a trinuclear Fe binding center, and the four Fe species can be properly assigned to the three Fe binding sites. Further, our spectroscopic data suggest that (1) the fully occupied trinuclear center supports an all ferrous state, (2) sites B and C are bridged by a mu-OH group forming a diiron subcenter within the trinuclear center, and (3) this subcenter can afford both a mixed valence Fe(2+)Fe(3+) state and a diferrous state. Mechanistic insights provided by these new findings are discussed and a minimal mechanistic scheme involving O-O bond cleavage is proposed.

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