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2014
Tschopp, E., O. Mateus, R. Kosma, M. Sander, U. Joger, and O. Wings. "A specimen-level cladistic analysis of Camarasaurus (Dinosauria, Sauropoda) and a revision of camarasaurid taxonomy." Journal of Vertebrate Paleontology. Program and Abstracts, 2014 (2014): 241-242.tschopp_et_al._2014_a_specimen-level_cladistic_analysis_of_camarasaurus.pdf
Strganac, C., J. Salminen, LL Jacobs, M. J. Polcyn, KM Ferguson, O. Mateus, AS Schulp, ML Morais, TS Tavares, and A. O. Gon?alves. "Carbon isotope stratigraphy, magnetostratigraphy, and 40Ar/39Ar age of the cretaceous South Atlantic coast, Namibe Basin, Angola." Journal of African Earth Sciences. 99 (2014): 452-462. Abstract
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Teixeira, RT, AM Fortes, C. Pinheiro, and H. Pereira. "Comparison of good- and bad-quality cork: application of high-throughput sequencing of phellogenic tissue." Journal of Experimental Botany (2014). Abstract
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Teixeira, RT, AM Fortes, C. Pinheiro, and H. Pereira. "Comparison of good- and bad-quality cork: application of high-throughput sequencing of phellogenic tissue." Journal of Experimental Botany (2014). Abstract
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Heleno, R., C. Garcia, P. Jordano, A. Traveset, J. M. Gómez, N. Blüthgen, J. Memmott, M. Moora, J. Cerdeira, S. Rodríguez-Echeverría, H. Freitas, and J. M. Olesen. "Ecological networks: Delving into the architecture of biodiversity." Biology Letters. 10 (2014). Abstract
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Araujo-Martins, J., Carreiro P. Martins, J. Viegas, D. Aelenei, MM Cano, JP Teixeira, P. Paixão, AL Papoila, P. Leiria-Pinto, C. Pedro, and others. "Environment and Health in Children Day Care Centres (ENVIRH)–Study rationale and protocol." Revista portuguesa de pneumologia. 20 (2014): 311-323. Abstract

Background Indoor air quality (IAQ) is considered an important determinant of human health. The association between exposure to volatile organic compounds, particulate matter, house dust mite, molds and bacteria in day care centers (DCC) is not completely clear. The aim of this project was to study these effects. Methods ? study design This study comprised two phases. Phase I included an evaluation of 45 DCCs (25 from Lisbon and 20 from Oporto, targeting 5161 children). In this phase, building characteristics, indoor CO2 and air temperature/relative humidity, were assessed. A children's respiratory health questionnaire derived from the ISAAC (International Study on Asthma and Allergies in Children) was also distributed. Phase II encompassed two evaluations and included 20 DCCs selected from phase I after a cluster analysis (11 from Lisbon and 9 from Oporto, targeting 2287 children). In this phase, data on ventilation, IAQ, thermal comfort parameters, respiratory and allergic health, airway inflammation biomarkers, respiratory virus infection patterns and parental and child stress were collected. Results In Phase I, building characteristics, occupant behavior and ventilation surrogates were collected from all DCCs. The response rate of the questionnaire was 61.7% (3186 children). Phase II included 1221 children. Association results between DCC characteristics, IAQ and health outcomes will be provided in order to support recommendations on IAQ and children's health. A building ventilation model will also be developed. Discussion This paper outlines methods that might be implemented by other investigators conducting studies on the association between respiratory health and indoor air quality at DCC.

Godinho, Maria Helena, Ralf Stannarius, and Carsten Tschierske European Conference on Liquid Crystals. Taylor & Francis, 2014. Abstract
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Patrício, P., Paulo Ivo Cortez Teixeira, AC Trindade, and M. H. Godinho. "Longitudinal versus polar wrinkling of core-shell fibers with anisotropic size mismatches." Physical Review E. 89.1 (2014): 012403. Abstract
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Sa, Sofia, Manoj B. Gawande, Alexandre Velhinho, Joao Pedro Veiga, Nenad Bundaleski, Joao Trigueiro, Alexander Tolstogouzov, Orlando M. N. D. Teodoro, Radek Zboril, Rajender S. Varma, and Paula S. Branco. "Magnetically recyclable magnetite-palladium (Nanocat-Fe-Pd) nanocatalyst for the Buchwald-Hartwig reaction." Green Chemistry. 16 (2014): 3494-3500. AbstractWebsite
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Tendeiro, Diogo, Gonçalo Lopes, Pedro Vieira, and Jose Paulo Santos. "Monte Carlo simulation of laser beams interaction with the human eye using Geant4." BioMedical Engineering OnLine. 13 (2014): 58. AbstractWebsite
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Tendeiro, Diogo, Gonçalo Lopes, Pedro Vieira, and Jose Paulo Santos. "Monte Carlo simulation of laser beams interaction with the human eye using Geant4." BioMedical Engineering OnLine. 13 (2014): 58. AbstractWebsite
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Lopes, G., D. Tendeiro, J. P. Santos, and P. Vieira. "Monte Carlo Simulation of Radiation through the Human Retina Using Geant4." Vol. 41. Cham: Springer International Publishing, 2014. 431-434. Abstract
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Lopes, G., D. Tendeiro, J. P. Santos, and P. Vieira. "Monte Carlo Simulation of Radiation through the Human Retina Using Geant4." Vol. 41. Cham: Springer International Publishing, 2014. 431-434. Abstract
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Young, M. T., S. Hua, L. Steel, D. Foffa, S. L. Brusatte, S. Thüring, O. Mateus, J. I. Ruiz-Omeñaca, P. Havlik, Y. Lepage, and M. B. De Andrade. "Revision of the Late Jurassic teleosaurid genus Machimosaurus (Crocodylomorpha, Thalattosuchia)." Royal Society Open Science. 1 (2014). Abstract
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2013
Li, Lidong, Patricia S. Lopes, Claudia A. Figueira, Clara S. B. Gomes, M. Teresa Duarte, Vitor Rosa, Christophe Fliedel, Teresa Aviles, and Pedro T. Gomes. "{Cationic and Neutral (Ar-BIAN) Copper( I) Complexes Containing Phosphane and Arsane Ancillary Ligands: Synthesis, Molecular Structure and Catalytic Behaviour in Cycloaddition Reactions of Azides and Alkynes}." {EUROPEAN JOURNAL OF INORGANIC CHEMISTRY} (2013): {1404-1417}. Abstract

{{A series of new cationic and neutral (Ar-BIAN) copper(I) complexes {[}in which Ar-BIAN = bis(aryl)acenaphthenequinonediimine] was synthesised and characterised by elemental analysis, 1D and 2D NMR spectroscopy and single-crystal Xray diffraction. The cationic complexes of the general formula {[}Cu(Ar-BIAN)L-2]BF4 {[}L-2 = (PPh3)(2) (1), dppe (2), dppf (3), (AsPh3)(2) (4); Ar = 4-iPrC(6)H(4) (a), 4-MeOC6H4 (b), 4-NO2C6H4 (c), 2-iPrC(6)H(4) (d), Ph2PCH2CH2PPh2 (dppe), (Ph2PC5H4)(2)Fe (dppf)] were synthesised by reaction of {[}Cu(EPh3)(4)]BF4 (E = P or As) and equimolar amounts of Ar-BIAN ligands, or by reaction of equimolar amounts of {[}Cu(NCMe)(4)]BF4, 4-iPrC(6)H(4)-BIAN (a) and diphosphanes dppe or dppf, in dichloromethane, whereas the neutral complexes of the types {[}CuX(Ar-BIAN)(EPh3)] {[}X = Cl

Almeida, R. M., P. Turano, I. Moura, J. J. Moura, and S. R. Pauleta. "Superoxide reductase: different interaction modes with its two redox partners." ChemBioChem. 14 (2013): 1858-66. AbstractWebsite

Anaerobic organisms have molecular systems to detoxify reactive oxygen species when transiently exposed to oxygen. One of these systems is superoxide reductase, which reduces O2 (.-) to H2 O2 without production of molecular oxygen. In order to complete the reduction of superoxide anion, superoxide reductase requires an electron, delivered by its redox partners, which in Desulfovibrio gigas are rubredoxin and/or desulforedoxin. In this work, we characterized the interaction of Desulfovibrio gigas superoxide reductase with both electron donors by using steady-state kinetics, 2D NMR titrations, and backbone relaxation measurements. The rubredoxin surface involved in the electron transfer complex with superoxide reductase comprises the solvent-exposed hydrophobic residues in the vicinity of its metal center (Cys9, Gly10, Cys42, Gly43, and Ala44), and a Kd of 3 muM at 59 mM ionic strength was estimated by NMR. The ionic strength dependence of superoxide-mediated rubredoxin oxidation by superoxide reductase has a maximum kapp of (37 +/- 12) min(-1) at 157 mM. Relative to the electron donor desulforedoxin, its complex with superoxide reductase was not detected by chemical shift perturbation, though this protein is able to transfer electrons to superoxide reductase with a maximum kapp of (31 +/- 7) min(-1) at an ionic strength of 57 mM. Competition experiments using steady-state kinetics and NMR spectroscopy (backbone relaxation measurements and use of a paramagnetic relaxation enhancement probe) with Fe-desulforedoxin in the presence of (15) N-Zn-rubredoxin showed that these two electron donors compete for the same site on the enzyme surface, as shown in the model structure of the complex generated by using restrained molecular docking calculations. These combined strategies indicate that the two small electron donors bind in different manners, with the desulforedoxin complex being a short lived electron transfer complex or more dynamic, with many equivalent kinetically competent orientations.

Thapper, A., A. C. Rizzi, CD Brondino, A. G. Wedd, R. J. Pais, B. K. Maiti, I. Moura, S. R. Pauleta, and J. J. Moura. "Copper-substituted forms of the wild type and C42A variant of rubredoxin." J Inorg Biochem. 127 (2013): 232-7. AbstractWebsite

In order to gain insights into the interplay between Cu(I) and Cu(II) in sulfur-rich protein environments, the first preparation and characterization of copper-substituted forms of the wild-type rubredoxin (Rd) from Desulfovibrio vulgaris Hildenborough are reported, as well as those of its variant C42A-Rd. The initial products appear to be tetrahedral Cu(I)(S-Cys)n species for the wild type (n=4) and the variant C42A (n=3, with an additional unidentified ligand). These species are unstable to aerial oxidation to products, whose properties are consistent with square planar Cu(II)(S-Cys)n species. These Cu(II) intermediates are susceptible to auto-reduction by ligand S-Cys to produce stable Cu(I) final products. The original Cu(I) center in the wild-type system can be regenerated by reduction, suggesting that the active site can accommodate Cu(I)(S-Cys)2 and Cys-S-S-Cys fragments in the final product. The absence of one S-Cys ligand prevents similar regeneration in the C42A-Rd system. These results emphasize the redox instability of Cu(II)-(S-Cys)n centers.

Neuparth, Nuno, Daniel Aelenei, Iolanda Caires, João Teixeira, João Viegas, Manuela Cano, Paula Leiria-Pinto, and Pedro Martins Environment and Health in Children Day Care Centers - Ambiente e Sa. Eds. Nuno Neuparth, Daniel Aelenei, Iolanda Caires, Joao Paulo Teixeira, Jo Viegas, Manuela Cano, Paula Leiria Pinto, and Pedro Martins. Universidade Nova de Lisboa, 1169-056 Lisboa: Faculdade de Ciências Médicas, 2013.Website
Ana, Baptista, Ferreira Isabel, and Borges João Paulo. "Cellulose-based composite Systems for Biomedical Applications." Biomass-based Biocomposites. Eds. Vijay Kumar Thakur, and Amar Singh Singha. Smithers Rapra, 2013. 47-60. Abstract
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MB, Gawande, Rathi AK, Branco PS, Potewar TM, Velhinho A, Nogueira ID, Tolstogouzov A, Ghumman CAA, and Teodoro OMND. "Nano-MgO-ZrO2 Mixed Metal oxides: Extensive characterization by SIMS and application in the reduction of carbonyl compounds and in multicomponent reactions." 3 (2013): 3611-3617. Abstract
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M.I., Gomes, Henriques-Rodrigues L., and Caeiro F. "Refined Estimation of a Light Tail: An Application to Environmental Data." Advances in Theoretical and Applied Statistics. Ed. Fortunato; Bar-Hen Avner(Eds.) Torelli, Nicola; Pesarin. Studies in Theoretical and Applied Statistics. Springer Berlin Heidelberg, 2013. 143-153. Abstract
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Bahubalindruni, Pydi Ganga, Vitor Grade Tavares, Pedro Barquinha, Candido Duarte, Pedro Guedes de Oliveira, Rodrigo Martins, and Elvira Fortunato. "Transparent Current Mirrors With a-GIZO TFTs: Neural Modeling, Simulation and Fabrication." Journal of Display Technology. 9 (2013): 1001-1006. AbstractWebsite
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Ghisolfi, A., C. Fliedel, V. Rosa, R. Pattacini, A. Thibon, K. Yu. Monakhov, and P. Braunstein. "Solvent-dependent reversible ligand exchange in nickel complexes of a monosulfide bis(diphenylphosphino)(N-thioether)amine." Chemistry - An Asian Journal. 8.8 (2013): 1795-1805. AbstractWebsite
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da} Rocha, {Rogério Eduardo Bordalo, {José Carlos Ribeiro} Kullberg, and Octávio Mateus. "A Bacia Lusitaniana: Estratigrafia, Paleogeografia e Tectónica." Geologia de Portugal no contexto da Ibéria. Eds. Dias, R. Araújo, A, Terrinha, P., and {J. C. } Kullberg. Escolar Editora, 2013. 195-347. Abstract
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