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2017
Garde, Francois, Daniel Aelenei, Laura Aelenei, Alessandra Scognamiglio, and Josef Ayoub Solution Sets for Net-Zero Energy Buildings. Wiley-{VCH} Verlag {GmbH} {&} Co. {KGaA}, 2017. AbstractWebsite
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Joaquim, Ana, Corneliu Cismasiu, Filipe Santos, and Elsa Caetano. "Estimation of the tensile force in the stay-cables of Salgueiro Maia Bridge using ambient vibration tests." ISDAC2017 - International Symposium on the Dynamics and Aerodynamics of Cables. Porto: FEUP, 2017. artigo_isdac_v5_ec.pdf
Pereira, Rui, Marco Couto, Francisco Ribeiro, Rui Rua, Jácome Cunha, João P. Fernandes, and João Saraiva. "Energy Efficiency across Programming Languages: How Do Energy, Time, and Memory Relate?" 10th ACM SIGPLAN International Conference on Software Language Engineering (SLE’17). Vancouver, Canada: ACM, 2017. paper.pdf
Bule, Pedro, Victor D. Alves, Vered Israeli-Ruimy, Ana L. Carvalho, Luís M. A. Ferreira, Steven P. Smith, Harry J. Gilbert, Shabir Najmudin, Edward A. Bayer, and Carlos M. G. A. Fontes. "Assembly of Ruminococcus flavefaciens cellulosome revealed by structures of two cohesin-dockerin complexes." Scientific Reports. 7.1 (2017): 759. AbstractWebsite

Cellulosomes are sophisticated multi-enzymatic nanomachines produced by anaerobes to effectively deconstruct plant structural carbohydrates. Cellulosome assembly involves the binding of enzyme-borne dockerins (Doc) to repeated cohesin (Coh) modules located in a non-catalytic scaffoldin. Docs appended to cellulosomal enzymes generally present two similar Coh-binding interfaces supporting a dual-binding mode, which may confer increased positional adjustment of the different complex components. Ruminococcus flavefaciens’ cellulosome is assembled from a repertoire of 223 Doc-containing proteins classified into 6 groups. Recent studies revealed that Docs of groups 3 and 6 are recruited to the cellulosome via a single-binding mode mechanism with an adaptor scaffoldin. To investigate the extent to which the single-binding mode contributes to the assembly of R. flavefaciens cellulosome, the structures of two group 1 Docs bound to Cohs of primary (ScaA) and adaptor (ScaB) scaffoldins were solved. The data revealed that group 1 Docs display a conserved mechanism of Coh recognition involving a single-binding mode. Therefore, in contrast to all cellulosomes described to date, the assembly of R. flavefaciens cellulosome involves single but not dual-binding mode Docs. Thus, this work reveals a novel mechanism of cellulosome assembly and challenges the ubiquitous implication of the dual-binding mode in the acquisition of cellulosome flexibility.

Marzola, Marco, Octávio Mateus, Neil H. Shubin, and Lars B. Clemmensen. "Cyclotosaurus naraserluki, sp. nov., a new Late Triassic cyclotosaurid (Amphibia, Temnospondyli) from the Fleming Fjord Formation of the Jameson Land Basin (East Greenland)." Journal of Vertebrate Paleontology (2017): e1303501. Abstractmarzola_et_al_2017_cyclotosaurus_greenland.pdfWebsite

ABSTRACTCyclotosaurus naraserluki, sp. nov., is a new Late Triassic capitosaurid amphibian from lacustrine deposits in the Fleming Fjord Formation of the Jameson Land Basin in Greenland. It is based on a fairly complete and well-preserved skull associated with two vertebral intercentra. Previously reported as Cyclotosaurus cf. posthumus, C. naraserluki is unique among cyclotosaurs for having the postorbitals embaying the supratemporals posteromedially. The anterior palatal vacuity presents an autapomorphic complete subdivision by a wide medial premaxillary-vomerine bony connection. The parasphenoid projects between the pterygoids and the exoccipitals, preventing a suture between the two, a primitive condition shared with Rhinesuchidae, Eryosuchus, and Kupferzellia. Within Cyclotosaurus, the Greenlandic skull has a distinctive combination of circular choanae (shared with C. ebrachensis, C. posthumus, and C. robustus) and a convex posteromedial margin of the tabulars (also present in C. ebrachensis and C. intermedius). A phylogenetic analysis indicates that C. naraserluki is the sister taxon of the middle Norian C. mordax from southern Germany, with which it shares a pair of premaxillary foramina. Cyclotosaurus is one of the most successful and diverse genera of Late Triassic temnospondyls, with at least eight species reported from middle Carnian to late Norian. Cyclotosaurus naraserluki is the largest amphibian ever reported from Greenland and one of the Late Triassic vertebrates with the highest northern paleolatitude currently known.http://zoobank.org/urn:lsid:zoobank.org:pub:43AAA541-031C-4EE1-B819-4846EBBD1BBBSUPPLEMENTAL DATA?Supplemental materials are available for this article for free at www.tandfonline.com/UJVPCitation for this article: Marzola, M., O. Mateus, N. H. Shubin, and L. B. Clemmensen. 2017. Cyclotosaurus naraserluki, sp. nov., a new Late Triassic cyclotosaurid (Amphibia, Temnospondyli) from the Fleming Fjord Formation of the Jameson Land Basin (East Greenland). Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1303501.ABSTRACTCyclotosaurus naraserluki, sp. nov., is a new Late Triassic capitosaurid amphibian from lacustrine deposits in the Fleming Fjord Formation of the Jameson Land Basin in Greenland. It is based on a fairly complete and well-preserved skull associated with two vertebral intercentra. Previously reported as Cyclotosaurus cf. posthumus, C. naraserluki is unique among cyclotosaurs for having the postorbitals embaying the supratemporals posteromedially. The anterior palatal vacuity presents an autapomorphic complete subdivision by a wide medial premaxillary-vomerine bony connection. The parasphenoid projects between the pterygoids and the exoccipitals, preventing a suture between the two, a primitive condition shared with Rhinesuchidae, Eryosuchus, and Kupferzellia. Within Cyclotosaurus, the Greenlandic skull has a distinctive combination of circular choanae (shared with C. ebrachensis, C. posthumus, and C. robustus) and a convex posteromedial margin of the tabulars (also present in C. ebrachensis and C. intermedius). A phylogenetic analysis indicates that C. naraserluki is the sister taxon of the middle Norian C. mordax from southern Germany, with which it shares a pair of premaxillary foramina. Cyclotosaurus is one of the most successful and diverse genera of Late Triassic temnospondyls, with at least eight species reported from middle Carnian to late Norian. Cyclotosaurus naraserluki is the largest amphibian ever reported from Greenland and one of the Late Triassic vertebrates with the highest northern paleolatitude currently known.http://zoobank.org/urn:lsid:zoobank.org:pub:43AAA541-031C-4EE1-B819-4846EBBD1BBBSUPPLEMENTAL DATA?Supplemental materials are available for this article for free at www.tandfonline.com/UJVPCitation for this article: Marzola, M., O. Mateus, N. H. Shubin, and L. B. Clemmensen. 2017. Cyclotosaurus naraserluki, sp. nov., a new Late Triassic cyclotosaurid (Amphibia, Temnospondyli) from the Fleming Fjord Formation of the Jameson Land Basin (East Greenland). Journal of Vertebrate Paleontology. DOI: 10.1080/02724634.2017.1303501.

Mendes, Jorge, Jácome Cunha, Francisco Duarte, Gregor Engels, João Saraiva, and Stefan Sauer. "Systematic Spreadsheet Construction Processes." IEEE Symposium on Visual Languages and Human-Centric Computing (VL/HCC). Raleigh, North Carolina, USA: IEEE, 2017. paper.pdf
Soares A., Estevão M. S., Marques Kovalishyn Latino Aires-de-Sousa Ramos Viveiros Ma M. M. B. * V. "3. Synthesis and Biological Evaluation of Hybrid 1,5-and 2,5-Disubstituted Indoles as Potentially New Antitubercular Agents." Med. Chem. . 13 (2017): 439-447.
Silva, M. A. G., M. P. Cunha, A. Pinho Ramos, B. Sena da Fonseca, and F. F. S. Pinho. "Accelerated action of external sulfate and chloride to study corrosion of tensile steel in reinforced concrete." Materiales de Construcción. 67.328 (2017).
Silva, Manuel A. G., Manuel P. Cunha, António P. Ramos, Bruno S. Fonseca, and Fernando F. S. Pinho. "Accelerated action of external sulfate and chloride to study corrosion of tensile steel in reinforced concrete." Materiales de Construcción.ISSN-L: 0465-2746; http://dx.doi.org/10.3989/mc.2017.10116 (2017).
Biscaia, Hugo C., Carlos Chastre, and Manuel A. G. Silva. "Analytical model with uncoupled adhesion laws for the bond failure prediction of curved FRP-concrete joints subjected to temperature." Theoretical and Applied Fracture Mechanics. 89 (2017): 63-78. Abstract

The strengthening of structures such as columns, beams, arches or slabs with Fibre Reinforced Polymers (FRP) has been the focus of several studies. However, the studies dedicated to the FRP debonding phenomenon of curved bonded joints affected by elevated temperatures are surprisingly limited and no studies on this topic are known, at present, to use nonlinear analytical or numerical approaches. Still, the available studies found in the literature are unanimous in affirming that the debonding phenomenon on such curved interfaces demands the interaction between Fracture Modes I and II. The present work aims to develop an analytical solution capable of simulating the debonding process of curved CFRP-toconcrete interfaces with a constant radius subjected to mechanical and/or thermal loads. Some examples are presented in which the influence of the radius of the interface and the temperature level is analysed. The analytical solution proposed here is based on adhesion laws in which, in the case ofMode II, an exponential bond vs. relative displacement law with temperature dependency is assumed, whereas the Mode I adhesive law is based on a linear with fragile rupture law with the same temperature dependency as Mode II.

Mateus, Octávio, Marco Marzola, Anne S. Schulp, Louis L. Jacobs, Michael J. Polcyn, Vladimir Pervov, António Olímpio Gonçalves, and Maria Luisa Morais. "Angolan ichnosite in a diamond mine shows the presence of a large terrestrial mammaliamorph, a crocodylomorph, and sauropod dinosaurs in the Early Cretaceous of Africa." Palaeogeography, Palaeoclimatology, Palaeoecology. 471 (2017): 220-232. Abstractmateus_et_al_2017_angolan_ichnosite_catoca.pdfWebsite

Abstract We report here new and the first mammaliamorph tracks from the Early Cretaceous of Africa. The tracksite, that also bears crocodylomorph and sauropod dinosaurian tracks, is in the Catoca diamond mine, Lunda Sul Province, Angola. The mammaliamorph tracks have a unique morphology, attributed to Catocapes angolanus ichnogen. et ichnosp. nov. and present an anterolateral projection of digit I and V. The tracks with an average length of 2.7 cm and width of 3.2 cm are the largest mammaliamorph tracks known from the Early Cretaceous unmatched in size in the skeletal fossil record. The crocodylomorph trackways and tracks are attributed to Angolaichnus adamanticus ichnogen. et ichnosp. nov. (‘ichnofamily’ Batrachopodidae) and present a functionally pentadactyl pes, an extremely outwardly rotated handprint, and an unusual tetradactyl and plantigrade manus. One medium-sized sauropod dinosaur trackway preserved skin impressions of a trackmaker with stride length of 1.6 m; a second is that of a small-sized sauropod trackmaker with a pace length of 75 cm.

Franco, F., Nunes A. Antão, Vicente M. da Silva, and N. M. C. Guerra Bearing capacity of shallow impervious footing in soil under sub-vertical seepage. Pro eedings of the 18 th International Conference on Soil Mechanics and Geotechnical Engineering. Seoul, Coreia, 2017.
Brás, C. P., A. Fisher, J. J. Júdice, K. Schönefeld, and S. Seifert. "A block active set algorithm with spectral choice line search for the symmetric eigenvalue complementarity problem." Applied Mathematics and Computation. 294 (2017): 36-48. AbstractWebsite

In this paper, we address the solution of the symmetric eigenvalue complementarity problem (EiCP) by treating an equivalent reformulation of finding a stationary point of a fractional quadratic program on the unit simplex. The spectral projected-gradient (SPG) method has been recommended to this optimization problem when the dimension of the symmetric EiCP is large and the accuracy of the solution is not a very important issue. We suggest a new algorithm which combines elements from the SPG method and the block active set method, where the latter was originally designed for box constrained quadratic programs. In the new algorithm the projection onto the unit simplex in the SPG method is replaced by the much cheaper projection onto a box. This can be of particular advantage for large and sparse symmetric EiCPs. Global convergence to a solution of the symmetric EiCP is established. Computational experience with medium and large symmetric EiCPs is reported to illustrate the efficacy and efficiency of the new algorithm.

Cardoso, Tiago, João Sousa, and José Barata. "Digital Games Development Model." EAI Endorsed Transactions on Serious Games. 4.12 (2017): e2. Abstract

Nowadays technology follows us everywhere. However, it is often overlooked when dealing with social issues, despite how easily it might improve the life of countless handicapped individuals. In other words, small pieces of software, under the form of games, can help the individual remain focus and go through treatments and therapies effortlessly. But game development is tricky because simply adopting a software development approach is not enough, as it assumes that games as a software can be developed through the commonly used systematic processes, yet these do have specific requirements. This paper proposes a new game development model to successfully deliver a quality serious game, towards social causes, bearing in mind the specific aspects both from games as a special kind of software and from the target players introducing a therapeutic/clinical perspective in the games development model.

Rybarczyk, Y., Kleine Deters, J., Aladro Gonzalvo, A., Gonzalez, M., Villarreal, S., and Esparza D. "ePHoRt project: a web-based platform for home motor rehabilitation." 5th World Conference on Information Systems and Technologies. Madeira, Portugal 2017.
Figueiredo, E., A. Lackinger, B. C. Rey, R. J. C. Silva, JP Veiga, and J. Mirão. "An Experimental Approach for Smelting Tin Ores From Northwestern Iberia." Materials and Manufacturing Processes. 32 (2017): 765-774.
Hughes, Simon, Arnold Van Acker, Carlos Chastre, Antonello Gasperi, George Jones, Holger Karutz, Jason Krohn, Diane Laliberté, Gosta Lindstrom, Alessandra Ronchetti, Larbi Sennour, Venkatesh Seshappa, Saha Sthaladipti, Arto Suika, Mathias Tillman, and Spyros Tsoukantas fib Bulletin 84. Precast Insulated Sandwich Panels. fib Bulletin 84. Lausanne: International Federation for Structural Concrete (fib), 2017. Abstract

Precast concrete sandwich panels started being used as cladding for buildings, together with the rise of industrial prefabrication, during the mid-20th century. Since then, society and industry have become increasingly aware of energy efficiency in all fields, for both affordability and sustainability consciousness. As such, buildings have been subject to increasingly stringent requirements with the technology of sandwich panels kept continually at the forefront.
Nowadays, sandwich panels have reached the highest standards of functional performance as structural efficiency, flexibility in use, the speed as well as of aesthetic appeal. These combine in building construction with the well-known advantages of prefabrication; such as construction, quality consciousness, durability and sustainability. Sandwich panels have gained more and more important in their field, thus representing quite a significant application within the industry of prefabrication and an important share of the market.
The Commission ‘Prefabrication’ is keen to promote the development of all precast structural concrete products and to transfer the knowledge to practical design and construction. Now filling a strategic gap, by issuing this Guide to Good Practice, which includes design considerations, structural analysis, building physics, use of materials, manufacturing methods, equipment, field performance, and provides a comprehensive overview of the information currently available worldwide. The Commission is particularly proud that this document is a result of close cooperation with PCI and that it will be published by both fib and PCI. This cooperation started six years ago, first with comparing the different approaches to several issues, then progressively integrating up to producing common documents, like this one, that wasn’t yet treated in a specific Guide by either body.

Pereira, Rui, Tiago Carção, Marco Couto, Jácome Cunha, João P. Fernandes, and João Saraiva. "Helping Programmers Improve the Energy Efficiency of Source Code (Abstract/Poster)." Proceedings of the 39th International Conference on Software Engineering (ICSE 2017). Buenos Aires, Argentina: ACM and IEEE CS, 2017. paper.pdfpostera3.pdf
Bini, Dario, Torsten Ehrhardt, Alexei Yu. Karlovich, and Ilya M. Spitkovsky(eds.) Large Truncated Toeplitz Matrices, Toeplitz Operators, and Related Topics. The Albrecht Böttcher Anniversary Volume. Basel: Birkhäuser Basel, 2017.Website
Maia, L. B., I. Moura, and JJG Moura. "Molybdenum and tungsten-containing enzymes: an overview." Molybdenum and Tungsten Enzymes: Biochemistry, RSC Metallobiology Series No. 5 (ISBN: 978-1-78262-089-1). Eds. R. Hille, C. Schulzke, and M. Kirk. Vol. 28. The Royal Society of Chemistry, 2017. 1-80. Abstract

Molybdenum is essential to most organisms, being found in the active site of enzymes that catalyze redox reactions involving carbon, nitrogen and sulfur atoms of key metabolites. Some of the molybdenum-dependent reactions constitute key steps in the global biogeochemical cycles of carbon, nitrogen and sulfur, with particular emphasis on the atmospheric dinitrogen fixation into ammonium. Presently, more than 50 molybdoenzymes are known. The great majority are prokaryotic, with eukaryotes holding only a restricted number of molybdoenzymes. Tungsten, probably because of its limited bioavailability, is less used, being found most often in anaerobic thermophilic prokaryotes.

This chapter provides an overview on the molybdo- and tungstoenzymes.
Their physiological context and significance will be described in Section 1.2,where the recent hypothesis that the lack of molybdenum could have been the limiting factor for the life evolution and expansion on early Earth will receive special attention (Section 1.2.1). A brief introduction to the chemical properties that shape the catalytically competent molybdenum/tungsten centres will be made in Section 1.3. In Section 1.4, the enzymes will be grouped in five main families (Sections 1.4.1 to 1.4.5), according to their metal/cofactor structure, and a general view on the structural (section (a)) and mechanistic (section (b)) versatility of each family will be presented. A brief account of novel heteronuclear centres containing molybdenum, whose physiological function is not yet fully understood, will be made in Section 1.4.6. A final outlook on our present knowledge about these enzymes will conclude this chapter.

http://docentes.fct.unl.pt/lblm/files/mo_w_enzymes-rsc_book-chap_1.pdf

Rybarczyk, Y., Kleine Deters, J., Aladro, A., Esparza, D., Gonzalez, M., Villarreal, S., and Nunes I. "Recognition of physiotherapeutic exercises through DTW and low-cost vision-based motion capture." 8th International Conference on Applied Human Factors and Ergonomics. Los Angeles, USA 2017.
dos Santos, Raquel, Ana Luísa Carvalho, and Cecília A. A. Roque. "Renaissance of protein crystallization and precipitation in biopharmaceuticals purification." Biotechnology Advances (2017): -. AbstractWebsite

Abstract The current chromatographic approaches used in protein purification are not keeping pace with the increasing biopharmaceutical market demand. With the upstream improvements, the bottleneck shifted towards the downstream process. New approaches rely in Anything But Chromatography methodologies and revisiting former techniques with a bioprocess perspective. Protein crystallization and precipitation methods are already implemented in the downstream process of diverse therapeutic biological macromolecules, overcoming the current chromatographic bottlenecks. Promising work is being developed in order to implement crystallization and precipitation in the purification pipeline of high value therapeutic molecules. This review focuses in the role of these two methodologies in current industrial purification processes, and highlights their potential implementation in the purification pipeline of high value therapeutic molecules, overcoming chromatographic holdups.

Costa, F., T. Silva, J. Fernandes, R. Calvo, and O. Mateus Retracing the history of a stegosaurian dinosaur discovery in Portugal and the importance of record-keeping in Palaentology. Abstract book of the XV Encuentro de Jóvenes Investigadores en Paleontología/XV Encontro de Jovens Investigadores em Paleontologia, Lisboa, 428 pp., 2017. Abstractcosta_et_al_2017_retracing_the_history_-_2017.pdf

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Silva, TP, D. P. S. Oliveira, M. J. Batista, JP Veiga, F. Noronha, and J. X. Matos. "Rhenium ocurrence in Portugal: an overview considering the valorisation of mineral resources." Rhenium, Properties, Uses and Occurrences. Ed. Eric James. New York: Nova Science Publishers Inc. New York, 2017. 85-116.