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2009
Agostinho, M., V. Rosa, T. Aviles, R. Welter, and P. Braunstein. "Synthesis and characterization of Co and Ni complexes stabilized by keto- and acetamide-derived P,O-type phosphine ligands." Dalton T (2009): 814-822. AbstractWebsite

The coordination properties of the beta-keto phosphine ligands R(2)PCH(2)C(O)Ph (HL(1), R = i-Pr; HL(2), R = Ph), of the new acetamide-derived phosphine ligand (i-Pr)(2)PNHC(O) Me (HL(3)) and of Ph(2)PNHC(O) Me (HL(4)) have been examined towards Ni(II) complexes. Comparisons are made between systems in which the PCH(2) function of the ketophosphine has been replaced with an isoelectronic PNH group in amide-derived ligands, or the PCH functionality of phosphinoenolates with a PN group in phosphinoiminolate complexes. Furthermore, ligands HL(2) and HL(4) reacted with [(eta(5)-C(5)H(5))CoI(2)(CO)] to afford the phosphine mono-adducts [(eta(5)-C(5)H(5))CoI(2){Ph(2)PCH(2)C(O)Ph}] (1) and [(eta(5)-C(5)H(5))CoI(2){Ph(2)PNHC(O)Me}] (3), respectively, which upon reaction with excess NEt(3) yielded the phosphinoenolate complex [(eta(5)-C(5)H(5))CoI{Ph(2)PCH (center dot center dot center dot) under barC((center dot center dot center dot) under barO)Ph}] (2) and the phosphinoiminolate complex [(eta(5)-C(5)H(5))CoI{Ph(2)PN (center dot center dot center dot) under barC((center dot center dot center dot) under barO)Me}] (4), respectively. The complexes cis-[Ni{(i-Pr)(2)PN (center dot center dot center dot) under barC((center dot center dot center dot) under barO)Me}(2)] (6) and cis-[Ni{Ph(2)PN (center dot center dot center dot) under barC((center dot center dot center dot) under barO)Me}(2)] (7) were obtained similarly from NiCl(2) and HL(3) and HL(4), respectively, in the presence of a base. The phosphinoenolate complex [Ni{(i-Pr)(2)PCH (center dot center dot center dot) under barC((center dot center dot center dot) under barO) Ph}(2)] (5) exists in ethanol as a mixture of the cis and trans isomers, in contrast to cis-[Ni{(Ph(2)PCH (center dot center dot center dot) under barC((center dot center dot center dot) under barO)Ph}(2)], and the solid-state structure of the trans isomer of 5 was established by X-ray diffraction. The structures of the ligand HL3 and of the complexes 1, 3 in 3 center dot 3/2CH(2)Cl(2), 4, 6 and 7 have also been determined by X-ray diffraction and are compared with those of related complexes. Complexes 4, 6 and 7 contain a five-membered heteroatomic metallocyclic moiety, which is constituted by five different chemical elements. The structural consequences of the steric bulk of the P substituents and of the electronic characteristics of the P, O chelates are discussed.

Louren{\c c}o, João, Ricardo Dias, João Lu\'ıs, Miguel Rebelo, and Vasco Pessanha. "Understanding the behavior of transactional memory applications." Proceedings of the 7th Workshop on Parallel and Distributed Systems: Testing, Analysis, and Debugging. PADTAD ’09. New York, NY, USA: ACM, 2009. 3:1-3:9. Abstract
Transactional memory is a new trend in concurrency control that was boosted by the advent of multi-core processors and the near to come many-core processors. It promises the performance of finer grain with the simplicity of coarse grain threading. However, there is a clear absence of software development tools oriented to the transactional memory programming model, which is confirmed by the very small number of related scientific works published until now. This paper describes ongoing work. We propose a very low overhead monitoring framework, developed specifically for monitoring TM computations, that collects the transactional events into a single log file, sorted in a global order. This framework is then used by a visualization tool to display different types of charts from two categories: statistical charts and thread-time space diagrams. These last diagrams are interactive, allowing to identify conflicting transactions. We use the visualization tool to analyse the behavior of two different, but similar, testing applications, illustrating how it can be used to better understand the behavior of these transactional memory applications.
Martins, R., L. Pereira, P. Barquinha, I. Ferreira, R. Prabakaran, G. GONCALVES, A. Goncalves, and E. Fortunato. "Zinc oxide and related compounds: order within the disorder." Zinc Oxide Materials and Devices Iv. Eds. F. H. Teherani, C. W. Litton, and D. J. Rogers. Vol. 7217. Proceedings of SPIE, 7217. 2009. Abstract
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Neshataeva, Ekaterina, Tilmar Kuemmell, André Ebbers, Gerd Bacher, David J. Rogers, VE Sandana, Hosseini F. Teherani, M. Razeghi, HJ Drouhin, and R. Martins. "Zinc Oxide Materials and Devices IV (Proceedings Volume)." (2009). Abstract
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Duarte, Ana Rita C., João F. Mano, and Rui L. Reis. "{Dexamethasone-loaded scaffolds prepared by supercritical-assisted phase inversion}." Acta Biomaterialia. 5 (2009): 2054-2062. Abstract

The aim of this study was to evaluate the possibility of preparing dexamethasone-loaded starch-based porous matrices in a one-step process. Supercritical phase inversion technique was used to prepare composite scaffolds of dexamethasone and a polymeric blend of starch and poly(l-lactic acid) (SPLA) for tissue engineering purposes. Dexamethasone is used in osteogenic media to direct the differentiation of stem cells towards the osteogenic lineage. Samples with different drug concentrations (5-15 wt.{%} polymer) were prepared at 200 bar and 55 °C. The presence of dexamethasone did not affect the porosity or interconnectivity of the polymeric matrices. Water uptake and degradation studies were also performed on SPLA scaffolds. We conclude that SPLA matrices prepared by supercritical phase inversion have a swelling degree of nearly 90{%} and the material presents a weight loss of ∼25{%} after 21 days in solution. Furthermore, in vitro drug release studies were carried out and the results show that a sustained release of dexamethasone was achieved over 21 days. The fitting of the power law to the experimental data demonstrated that drug release is governed by an anomalous transport, i.e., both the drug diffusion and the swelling of the matrix influence the release of dexamethasone out of the scaffold. The kinetic constant was also determined. This study reports the feasibility of using supercritical fluid technology to process in one step a porous matrix loaded with a pharmaceutical agent for tissue engineering purposes. © 2009 Acta Materialia Inc.

Rivas, Maria G., Cristiano S. Mota, Sofia R. Pauleta, Marta S. P. Carepo, Filipe Folgosa, Susana L. A. Andrade, Guy Fauque, Alice S. Pereira, Pedro Tavares, Juan J. Calvete, Isabel Moura, and Jose J. G. Moura. "{Isolation and characterization of a new Cu-Fe protein from Desulfovibrio aminophilus DSM12254.}." Journal Of Inorganic Biochemistry. 103 (2009): 1314-1322. Abstract
The isolation and characterization of a new metalloprotein containing Cu and Fe atoms is reported. The as-isolated Cu-Fe protein shows an UV-visible spectrum with absorption bands at 320 nm, 409 nm and 615 nm. Molecular mass of the native protein along with denaturating electrophoresis and mass spectrometry data show that this protein is a multimer consisting of 14+/-1 subunits of 15254.3+/-7.6 Da. Mössbauer spectroscopy data of the as-isolated Cu-Fe protein is consistent with the presence of [2Fe-2S](2+) centers. Data interpretation of the dithionite reduced protein suggest that the metallic cluster could be constituted by two ferromagnetically coupled [2Fe-2S](+) spin delocalized pairs. The biochemical properties of the Cu-Fe protein are similar to the recently reported molybdenum resistance associated protein from Desulfovibrio, D. alaskensis. Furthermore, a BLAST search from the DNA deduced amino acid sequence shows that the Cu-Fe protein has homology with proteins annotated as zinc resistance associated proteins from Desulfovibrio, D. alaskensis, D. vulgaris Hildenborough, D. piger ATCC 29098. These facts suggest a possible role of the Cu-Fe protein in metal tolerance.
Duarte, Ana Rita C., Joo F. Mano, and Rui L. Reis. "{Perspectives on: Supercritical fluid technology for 3d tissue engineering scaffold applications}." Journal of Bioactive and Compatible Polymers. 24 (2009): 385-400. Abstract

Supercritical fluid technology has proven to be useful for many pharmaceutical applications and is now emerging as an alternative to conventional processes for the preparation of 3D structures and injectable particles suitable to be used in regenerative medicine. A current overview of the basic principles underlying supercritical fluid technology, the state of the art and future potential of this technology are presented.

Duarte, Ana Rita C., João F. Mano, and Rui L. Reis. "{Preparation of chitosan scaffolds loaded with dexamethasone for tissue engineering applications using supercritical fluid technology}." European Polymer Journal. 45 (2009): 141-148. Abstract

Supercritical fluid impregnation was tested to prepare a new scaffold loaded with a bioactive compound. Dexamethasone is used in osteogenic media to direct the differentiation of stem cells towards the osteogenic lineage. Dexamethasone was impregnated in chitosan scaffolds at different operating conditions, in order to optimize the impregnation process. Pressure and temperature affect the carbon dioxide density and influence the swelling of the polymer and the drug solubility in the fluid phase, therefore these are two important parameters that were studied in this work. Chitosan sponges prepared by freeze drying were impregnated with the active compound at pressures from 8.0 up to 14.0 MPa and temperatures from 35 up to 55 °C. The effect of the impregnation contact time (3 h and 6 h) was also evaluated. From the experiments performed we can conclude that the yield of impregnation is lower when increasing pressure and temperature. The contact time will mainly influence the amount of drug impregnated in the scaffold and for higher contact times the impregnation yield is also higher. Scanning electron microscopy shows particles of dexamethasone in the bulk of the scaffold, which confirms the feasibility of the supercritical fluid impregnation technology for the preparation of delivery devices. The loading capacity of the scaffolds was determined by spectroscopic analysis and the highest loading was achieved for the experiments performed at 8.0 MPa and 35 °C. Furthermore, in vitro drug release studies were carried out and the results show that dexamethasone was sustainably released. Supercritical fluid impregnation proved to be feasible for the preparation of a drug delivery system for bone tissue engineering purposes. © 2008 Elsevier Ltd. All rights reserved.

Duarte, Ana Rita C., João F. Mano, and Rui L. Reis. "{Preparation of starch-based scaffolds for tissue engineering by supercritical immersion precipitation}." Journal of Supercritical Fluids. 49 (2009): 279-285. Abstract

The aim of this study was to evaluate the possibility of preparing starch-based porous matrixes using supercritical fluid technology. Supercritical immersion precipitation technique was used to prepare scaffolds of a polymeric blend of starch and poly(l-lactic acid) for tissue engineering purposes.Immersion precipitation experiments were carried out at different operational conditions and highly porous and interconnected scaffolds were obtained. Two organic solvents, dichloromethane and chloroform were tested, and from the results obtained chloroform was the more favourable for the process. The effect of polymer solution concentration (5 up to 20 wt{%}), temperature (35 up to 55 °C) and pressure (100 up to 200 bar) in the SPLA (50:50 wt{%}) membrane morphology, porosity and interconnectivity was evaluated. All the conditions tested were in the region of total miscibility between the organic solvent and carbon dioxide. Additionally, a blend with a different starch-poly(l-lactic acid) ratio (30:70 wt{%}) was tested. Bicontinuous structures were formed indicating that the L-L demixing process that governs the phase inversion is the spinodal decomposition. © 2008 Elsevier B.V. All rights reserved.

Duarte, Ana Rita C., Sofia G. Caridade, Jo??o F. Mano, and Rui L. Reis. "{Processing of novel bioactive polymeric matrixes for tissue engineering using supercritical fluid technology}." Materials Science and Engineering C. 29 (2009): 2110-2115. Abstract

The aim of this study was to develop a new process for the production of bioactive 3D scaffolds using a clean and environmentally friendly technology. The possibility of preparing composite scaffolds of Bioglass?? and a polymeric blend of starch and poly(l-lactic acid) (SPLA50) was evaluated. Supercritical phase-inversion technique was used to prepare inorganic particles loaded starch-based porous composite matrixes in a one-step process for bone tissue engineering purposes. Due to their osteoconductive properties some glasses and ceramics are interesting materials to be used for bone tissue engineering purposes; however their poor mechanical properties create the need of a polymeric support where the inorganic fraction can be dispersed. Samples impregnated with different concentrations of Bioglass?? (10 and 15{%} wt/wt polymer) were prepared at 200??bar and 55????C. The presence of Bioglass?? did not affect the porosity or interconnectivity of the polymeric matrixes. Dynamic mechanical analysis has proven that the modulus of the SPLA50 scaffolds increases when glass particles are impregnated within the matrix. In vitro bioactivity studies were carried out using simulated body fluid and the results show that a calcium-phosphate layer started to be formed after only 1??day of immersion. Chemical analysis of the apatite layer formed on the surface of the scaffold was performed by different techniques, namely EDS and FTIR spectroscopy and X-ray diffraction (XRD). The ion concentration in the simulated body fluid was also carried out by ICP analysis. Results suggest that a bone-like apatite layer was formed. This study reports the feasibility of using supercritical fluid technology to process, in one step, a porous matrix loaded with a bioactive material for tissue engineering purposes. ?? 2009 Elsevier B.V. All rights reserved.

Cruz, J., M. Fonseca, H. Luis, R. Mateus, H. Marques, A. P. Jesus, J. P. Ribeiro, O. M. N. D. Teodoro, and C. Rolfs. "{Production and characterization of thin 7 Li targets fabricated by ion implantation}." Nuclear Inst. and Methods in Physics Research, B. 267 (2009): 478-481. AbstractWebsite

Very high fluence implantation of 7Li+ ions was used to promote the formation of a thin and high density 7Li target in the surface region of Al samples. The implanted volume was characterized by particle induced gamma-ray emission, Rutherford backscattering spectrometry, X-ray photoelectron spectros- copy and nuclear reaction analysis, revealing that the implanted surface is a combination of Li2CO3, metallic lithium, LiOH and C, with almost no Al present. Radiation damage effects by proton beams were studied by observing the evolution of the 7Li(p,a)4He nuclear reaction yield with the accumulated charge, at different proton energies, revealing high stability of the produced Li target.

Pei, Z. L., L. Pereira, G. Gonçalves, P. Barquinha, N. Franco, E. Alves, A. M. B. Rego, R. Martins, and E. Fortunato. "{Room-Temperature Cosputtered HfO[sub 2]–Al[sub 2]O[sub 3] Multicomponent Gate Dielectrics}." Electrochemical and Solid-State Letters. 12 (2009): G65. AbstractWebsite
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Duarte, A. R. C., J. F. Mano, and R. L. Reis. "{Supercritical fluids in biomedical and tissue engineering applications: a review}." International Materials Reviews. 54 (2009): 214-222. AbstractWebsite

Over the past several years, the definition of a scaffold for tissue engineering has changed dramatically, from a material that acts only as an inert structural support for cell attachment to serving as a more complex and dynamic environment for tissue development. This paper is a review on the existing and on the new emerging techniques based on supercritical fluid technology for the preparation of scaffolds and particles for tissue engineering applications. Supercritical fluid technology has already proven to be feasible for many pharmaceutical applications and is now emerging as an alternative to conventional materials' processing methods for the preparation of three-dimensional structures and injectable particles suitable to be used in regenerative medicine. The basic principles underlying each technique are here presented as well as the advantages and disadvantages of each process. The state of the art is reviewed and the major conclusions of the studies reported in the literature are discussed.

2008
Wang, Jinzhong, Elangovan Elamurugu, Vincent Sallet, Francois Jomard, Alain Lusson, Ana Botelho M. do Rego, Pedro Barquinha, Goncalo Goncalves, Rodrigo Martins, and Elvira Fortunato. "Effect of annealing on the properties of N-doped ZnO films deposited by RF magnetron sputtering." Applied Surface Science. 254 (2008): 7178-7182. AbstractWebsite
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Viegas, Aldino, Natercia F. Bras, Nuno M. F. S. A. Cerqueira, Pedro Alexandrino Fernandes, Jose A. M. Prates, Carlos M. G. A. Fontes, Marta Bruix, Maria Joao Romao, Ana Luisa Carvalho, Maria Joao Ramos, Anjos L. Macedo, and Eurico J. Cabrita. "Molecular determinants of ligand specificity in family 11 carbohydrate binding modules - an NMR, X-ray crystallography and computational chemistry approach." Febs Journal. 275 (2008): 2524-2535. Abstract
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Martins, R. M. S., N. Schell, A. Muecklich, H. Reuther, M. Beckers, R. J. C. Silva, L. Pereira, and Braz F. M. Fernandes. "Study of graded Ni-Ti shape memory alloy film growth on Si(100) substrate." Applied Physics a-Materials Science & Processing. 91.2 (2008): 291-299. Abstract
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Fortunato, Elvira M. C., Lus M. N. Pereira, Pedro M. C. Barquinha, Ana Botelho M. do Rego, Goncalo Goncalves, Anna Vila, Juan R. Morante, and Rodrigo F. P. Martins. "High mobility indium free amorphous oxide thin film transistors." Applied Physics Letters. 92 (2008). AbstractWebsite
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de Sousa, P. M. P., S. R. Pauleta, D. Rodrigues, M. L. S. Goncalves, G. W. Pettigrew, I. Moura, JJG Moura, and M. M. C. dos Santos. "Benefits of membrane electrodes in the electrochemistry of metalloproteins: mediated catalysis of Paracoccus pantotrophus cytochrome c peroxidase by horse cytochrome c: a case study." Journal of Biological Inorganic Chemistry. 13 (2008): 779-787. AbstractWebsite

A comparative study of direct and mediated electrochemistry of metalloproteins in bulk and membrane-entrapped solutions is presented. This work reports the first electrochemical study of the electron transfer between a bacterial cytochrome c peroxidase and horse heart cytochrome c. The mediated catalysis of the peroxidase was analysed both using the membrane electrode configuration and with all proteins in solution. An apparent Michaelis constant of 66 +/- 4 and 42 +/- 5 mu M was determined at pH 7.0 and 0 M NaCl for membrane and bulk solutions, respectively. The data revealed that maximum activity occurs at 50 mM NaCl, pH 7.0, with intermolecular rate constants of (4.4 +/- 0.5) x 10(6) and (1.0 +/- 0.5) x 10(6) M(-1) s(-1) for membrane-entrapped and bulk solutions, respectively. The influence of parameters such as pH or ionic strength on the mediated catalytic activity was analysed using this approach, drawing attention to the fact that careful analysis of the results is needed to ensure that no artefacts are introduced by the use of the membrane configuration and/or promoters, and therefore the dependence truly reflects the influence of these parameters on the (mediated) catalysis. From the pH dependence, a pK of 7.5 was estimated for the mediated enzymatic catalysis.

ER, Neagu, Neagu RM, Dias CJ, Lanca MC, and Marat-Mendes JN. "The determination of the metal-dielectric interface barrier height from the open-circuit isothermal charging current." Journal of Applied Physics. 104 (2008). AbstractWebsite
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JD, Botas, Velhinho A, and Silva RJC. "Elastic Behaviour of Spherical Particles Reinforced Metal-Matrix Composites." Advanced Materials Forum Iv. Ed. Baptista APM Sa Alves Malheiros LF Vieira C. F. M. Marques AT, Silva AF. Vol. 587-588. Materials Science Forum, 587-588. 2008. 202-206. Abstract

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Grilo, Antonio, Li Man-Sze, Crave Servane, and Berg van den Roland. "An Enterprise Interoperability Value Proposition Framework." ISPIM. 2008. 201-209. Abstract
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RM, Neagu, Neagu ER, Lanca MC, and Marat-Mendes JN. "New Experimental Facts Concerning the Thermally Stimulated Discharge Current in Dielectric Materials." Advanced Materials Forum Iv. Ed. Baptista APM Sa Alves Malheiros LF Vieira C. F. M. Marques AT, Silva AF. Vol. 587-588. Materials Science Forum, 587-588. 2008. 328-332. Abstract
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Man-Se, Li, Crave Servane, Grilo Antonio, and Berg van den Roland. "A New Value Proposition of Interoperability for Enterprises to Advance the Frontiers of the European Knowledge Economy." Collaboration and the Knowledge Economy: Issues, Applications, Case Studies, Paul Cunningham and Miriam Cunningham (Eds), IOS Press. 2008. 861-869. Abstract
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