Kacsuk, Péter, José C. Cunha, Gábor Dózsa, João Louren{\c c}o, Tibor Fadgyas, and Tiago Antão. "
A graphical development and debugging environment for parallel programs."
Parallel Comput.. 22 (1997): 1747-1770.
AbstractTo provide high-level graphical support for PVM (Parallel Virtual Machine) based program development, a complex programming environment (GRADE) is being developed. GRADE currently provides tools to construct, execute, debug, monitor and visualise message-passing parallel programs. It offers high-level graphical programming abstraction mechanism to construct parallel applications by introducing a new graphical language called GRAPNEL. GRADE also provides the programmer with the same graphical user interface during the program design and debugging stages. A distributed debugging engine (DDBG) assists the user in debugging GRAPNEL programs on distributed memory computer architectures. Tape/PVM and PROVE support the performance monitoring and visualization of parallel programs developed in the GRADE environment.
Fantoni, A., Vieira Martins M. R. "
Bidimensional numerical analysis of a μc-Si:H P-I-N photodiode under local illumination."
Materials Research Society Symposium - Proceedings. Vol. 467. 1997. 765-770.
AbstractThe behaviour of a microcrystalline p-i-n junction locally illuminated with monochromatic radiation (incident power of 50 mW/cm2) is analysed by means of numerical experiences. The model used for the two-dimensional analysis of the transport properties of a μc-Si:H p-i-n photo-detector is based on the simultaneous solution of the continuity equations for holes and electrons together with the Poisson's equation. The solution is found on a rectangular domain, taking into account the dimension perpendicular to the junction plane and one on the parallel plane. The lateral effects occurring within the structure, due to the non-uniformity of the illumination, are outlined. The results we present show that the potential profile has a linear variation from the illuminated to the dark neutral region. The lateral components of the electric field and of the current density vectors reveal to be mainly localised inside the doped layers.
Fortunato, E., Malik Seco Macarico Martins A. A. A. "
High sensitivity photochemical sensors based on amorphous silicon."
Materials Research Society Symposium - Proceedings. Vol. 467. 1997. 949-954.
AbstractHydrogenated amorphous silicon photochemical sensors based on Pd-MIS structures were produced by Plasma Enhanced Chemical Vapor Deposition with two different oxidized surfaces (thermal and chemical oxidation). The behaviour of dark and illuminated current-voltage characteristics in air and in the presence of a hydrogen atmosphere is explained by the changes induced by the gases in the work function of the metal, modifying the electrical properties of the interface. The photochemical sensors produced present more than 2 orders of magnitude variation on the reverse dark current when in presence of 400 ppm hydrogen to which it corresponds a decrease of 45% on the open circuit voltage.
Fantoni, A., Vieira Cruz Martins M. J. R. "
Numerical simulation of a/μc-Si:H p-i-n photo-diode under non-uniform illumination: A 2D transport problem."
Proceedings of SPIE - The International Society for Optical Engineering. Vol. 2997. 1997. 234-243.
AbstractWe report here about a computer simulation program, based on a comprehensive physical and numerical model of an a/μc-Si:H p-i-n device, applied to the 2D problem of describing the transport properties within the structure under non- uniform illumination. The continuity equations for holes and electrons together with Poisson's equation are solved simultaneously along the two directions parallel and perpendicular to the junction. The basic semiconductor equations are implemented with a recombination mechanism reflecting the microcrystalline structure of the different layers. The lateral effects occurring within the structure, due to the non-uniformity of the radiation are outlined. The simulation results obtained for different wavelengths of the incident light are compared and shown their dependence on the energy of the radiation. The results of simulating a p-i-n μc-Si:H junctions under non-uniform illumination is that the generated lateral effects depend not only in intensity but also in direction on the wavelength of the incident radiation. ©2004 Copyright SPIE - The International Society for Optical Engineering.
Matias, P., V. Fulop, A. Thompson, A. Gonzalez, and MA Carrondo. "
{Desulfoferrodoxin structure determined by MAD phasing and refinement to 1.9-angstrom resolution reveals a unique combination of a tetrahedral FeS4 centre with a square pyramidal FeSN4 centre}."
J Biol Inorg Chem. 2 (1997): 680-689.
AbstractThe structure of desulfoferrodoxin (DFX), a protein containing two mononuclear non-heme iron centres, has been solved by the MAD method using phases determined at 2.8 Angstrom resolution. The iron atoms in the native protein were used as the anomalous scatterers. The model was built from an electron density map obtained after density modification and refined against data collected at 1.9 Angstrom. Desulfoferrodoxin is a homodimer which can be described in terms of two domains, each with two crystallographically equivalent non-heme mononuclear iron centres. Domain I is similar to desulforedoxin with distorted rubredoxin-type centres, and domain II has iron centres with square pyramidal coordination to four nitrogens from histidines as the equatorial ligands and one sulfur from a cysteine as the axial ligand. Domain I in DFX shows a remarkable structural fit with the DX homodimer. Furthermore, three beta-sheets extending from one monomer to another in DFX, two in domain I and one in domain II, strongly support the assumption of DFX as a functional dimer. A calcium ion, indispensable in the crystallisation process, was assumed at the dimer interface and appears to contribute to dimer stabilisation. The C-terminal domain in the monomer has a topology fold similar to that of fibronectin III.