Export 1243 results:
Sort by: Author Title Type [ Year  (Desc)]
2010
Diogo, ELF, JM Santos, and AJL Phillips. "Phylogeny, morphology and pathogenicity of Diaporthe and Phomopsis species on almond in Portugal." Fungal Diversity. 44 (2010): 107-115. Abstract
n/a
Dunlop, Cameron D., Camille Bonomelli, Fatma Mansab, Snezana Vasiljevic, Katie J. Doores, Mark R. Wormald, Angelina S. Palma, Ten Feizi, David J. Harvey, Raymond A. Dwek, Max Crispin, and Christopher N. Scanlan. "Polysaccharide mimicry of the epitope of the broadly neutralizing anti-HIV antibody, 2G12, induces enhanced antibody responses to self oligomannose glycans." Glycobiology. 20 (2010): 812-823. Abstract
n/a
Henriques, J., P. Gil, Alberto Cardoso, P. Carvalho, H. Duarte-Ramos, and António Dourado. "Power Plant Applications of Advanced Control Techniques." Power Plant Applications of Advanced Control Techniques. Ed. Pal Szentannai. n/a: n/a, 2010. n/a. Abstract
n/a
Paulino, Hervé, João André Martins, João Louren{\c c}o, and Nuno Duro. "SmART: An Application Reconfiguration Framework." Complex Systems Design & Management. Eds. Marc Aiguier, Francis Bretaudeau, and Daniel Krob. Springer Berlin Heidelberg, 2010. 73-84. Abstract
SmART (Smart Application Reconfiguration Tool) is a framework for the automatic configuration of systems and applications. The tool implements an application configuration workflow that resorts to the similarities between configuration files (i.e., patterns such as parameters, comments and blocks) to allow a syntax independent manipulation and transformation of system and application configuration files.Without compromising its generality, SmART targets virtualized IT infrastructures, configuring virtual appliances and its applications. SmART reduces the time required to (re)configure a set of applications by automating time-consuming steps of the process, independently of the nature of the application to be configured. Industrial experimentation and utilization of SmART show that the framework is able to correctly transform a large amount of configuration files into a generic syntax and back to their original syntax. They also show that the elapsed time in that process is adequate to what would be expected of an interactive tool. SmART is currently being integrated into the VIRTU bundle, whose trial version is available for download from the project’s web page.
Dias, Ricardo, João Seco, and João Louren{\c c}o. "Snapshot Isolation Anomalies Detection in Software Transactional Memory." InForum 2010: Proceedings of InForum Simpósio de Informática. Universidade do Minho, 2010. Abstract
Some performance issues of transactional memory are caused by unnecessary abort situations where non serializable and yet non conflicting transactions are scheduled to execute concurrently. Smartly relaxing the isolation properties of transactions may overcome these issues and attain considerable performance improvements. However, it is known that relaxing isolation restrictions may lead to runtime anomalies. In some situations, like database management systems, developers may choose that compromise, hence avoiding anomalies explicitly. Memory transactions protect the state of the program, therefore execution anomalies may have more severe consequences in the semantics of programs. So, the compromise between a relaxed isolation strategy and enforcing the necessary program correctness is harder to setup. The solution we devise is to statically analyse programs to detect the kind of anomalies that emerge under snapshot isolation. Our approach allows a compiler to either warn the developer about the possible snapshot isolation anomalies in a given program, or possibly inform automatic correctness strategies to ensure Serializability.
Dias, Ricardo J., Dino Distefano, João M. Lourenço, and João Costa Seco StarTM: Automatic Verification of Snapshot Isolation in Transactional Memory Java Programs. Departamento de Informática FCT/UNL, 2010.
Drasovean, R. a, R. b Monteiro, and M. c Cherif. "Structure and morphology study of cobalt oxide doped silica nanocomposite films." AIP Conference Proceedings. Vol. 1203. 2010. 483-488. Abstract

Cobalt oxide doped silica films were synthesized by a dip-coating technique. Initial compounds were cobalt acetate Co(CH3COO)2-4H 2O and tetraethoxysilane Si(OC2H5)4. The chemical composition was studied by X-ray diffraction and UV-Vis spectroscopy. The morphology analyses were carried out by means of atomic force microscopy. The average diameter of cobalt oxide dispersed particles increases with the molar ratio Co:Si and with the aging time of the initial colloidal solution. © 2009 American Institute of Physics.

Pinto, R. M., R. I. Olariu, J. Lameiras, F. T. Martins, A. A. Dias, G. J. Langley, P. Rodrigues, C. D. Maycock, J. P. Santos, M. F. Duarte, M. T. Fernandez, and M. L. Costa. "Study of selected benzyl azides by UV photoelectron spectroscopy and mass spectrometry." Journal of Molecular Structure. 980 (2010): 163-171. AbstractWebsite
Benzyl azide and the three methylbenzyl azides were synthesized and characterized by mass spectrometry (MS) and ultraviolet photoelectron spectroscopy (UVPES). The electron ionization fragmentation mechanisms for benzyl azide and their methyl derivatives were studied by accurate mass measurements and linked scans at constant B/E. For benzyl azide, in order to clarify the fragmentation mechanism, labelling experiments were performed. From the mass analysis of methylbenzyl azides isomers it was possible to differentiate the isomers ortho, meta and para. The abundance and nature of the ions resulting from the molecular ion fragmentation, for the three distinct isomers of substituted benzyl azides, were rationalized in terms of the electronic properties of the substituent. Concerning the para-isomer, IRC calculations were performed at UHF/6-31G(d) level. The photoionization study of benzyl azide, with He(I) radiation, revealed five bands in the 8-21 eV ionization energies region. From every photoelectron spectrum of methylbenzyl azides isomers it has been identified seven bands, on the same range as the benzyl azide. Interpretation of the photoelectron spectra was accomplished applying Koopmans' theorem to the SCF orbital energies obtained at HF/6-311++G(d, p) level.
Pinto, R. M., R. I. Olariu, J. Lameiras, F. T. Martins, A. A. Dias, G. J. Langley, P. Rodrigues, C. D. Maycock, J. P. Santos, M. F. Duarte, M. T. Fernandez, and M. L. Costa. "Study of selected benzyl azides by UV photoelectron spectroscopy and mass spectrometry." Journal of Molecular Structure. 980 (2010): 163-171. AbstractWebsite

Benzyl azide and the three methylbenzyl azides were synthesized and characterized by mass spectrometry (MS) and ultraviolet photoelectron spectroscopy (UVPES). The electron ionization fragmentation mechanisms for benzyl azide and their methyl derivatives were studied by accurate mass measurements and linked scans at constant B/E. For benzyl azide, in order to clarify the fragmentation mechanism, labelling experiments were performed. From the mass analysis of methylbenzyl azides isomers it was possible to differentiate the isomers ortho, meta and para. The abundance and nature of the ions resulting from the molecular ion fragmentation, for the three distinct isomers of substituted benzyl azides, were rationalized in terms of the electronic properties of the substituent. Concerning the para-isomer, IRC calculations were performed at UHF/6-31G(d) level. The photoionization study of benzyl azide, with He(I) radiation, revealed five bands in the 8-21 eV ionization energies region. From every photoelectron spectrum of methylbenzyl azides isomers it has been identified seven bands, on the same range as the benzyl azide. Interpretation of the photoelectron spectra was accomplished applying Koopmans' theorem to the SCF orbital energies obtained at HF/6-311++G(d, p) level.

Neagu, E. R., C. J. Dias, M. C. Lanca, R. Igreja, P. Inacio, J. N. Marat-Mendes, and Ieee. "The Study of the Molecular Movements in the Range of Glass Transition by the Final Thermally Stimulated Discharge Current Technique." Proceedings of the 2010 Ieee International Conference on Solid Dielectrics. IEEE International Conference on Solid Dielectrics-ICSD. 2010. Abstract
n/a
Neagu, E. R., C. J. Dias, M. C. Lanca, R. Igreja, P. Inacio, J. N. Marat-Mendes, and Ieee. "The Study of the Molecular Movements in the Range of Glass Transition by the Final Thermally Stimulated Discharge Current Technique." Proceedings of the 2010 Ieee International Conference on Solid Dielectrics (Icsd 2010) (2010). Abstract
n/a
Neagu, E. R., C. J. Dias, M. C. Lanca, R. Igreja, P. Inacio, J. N. Marat-Mendes, and Ieee. "The Study of the Molecular Movements in the Range of Glass Transition by the Final Thermally Stimulated Discharge Current Technique." Proceedings of the 2010 Ieee International Conference on Solid Dielectrics. IEEE International Conference on Solid Dielectrics-ICSD. 2010. Abstract

The electrical methods used to study the molecular movements are based on the movement of the dipoles under DC or AC electric field. We have proposed recently a combined measuring protocol to analyze charge injection/extraction, transport, trapping and de-trapping in polar or non-polar dielectric materials. The method is used here to analyze the molecular movements in polyimide in the temperature range from 293 to 572 K. A strong relaxation was observed around 402 K and a very weak relaxation around 345 K. This is the beta relaxation which is quite complex. As concern the behavior at high temperatures, above the beta relaxation, a high peak was observed that shifts continuously to higher temperatures as the charging temperature and/or the charging field increase. The maximum current of the peak increases and the temperature corresponding to the maximum current increases as the charging temperature and/or the charging field increase, given a direct observation of the so called cross-over effect related to current decay for sample charged at high fields and/or high temperatures.

Neagu, E. R., C. J. Dias, M. C. Lanca, R. Igreja, P. Inacio, J. N. Marat-Mendes, and Ieee. "The Study of the Molecular Movements in the Range of Glass Transition by the Final Thermally Stimulated Discharge Current Technique." Proceedings of the 2010 Ieee International Conference on Solid Dielectrics. IEEE International Conference on Solid Dielectrics-ICSD. 2010. Abstract
n/a
Santos, H. M., R. Carreira, M. S. Diniz, M. G. Rivas, C. Lodeiro, JJG Moura, and J. L. Capelo. "Ultrasonic multiprobe as a new tool to overcome the bottleneck of throughput in workflows for protein identification relaying on ultrasonic energy." Talanta. 81 (2010): 55-62. AbstractWebsite
n/a
Antunes, R., F. Coito, and H. Duarte-Ramos. "Using Human Dynamics to Improve Operator Performance." Emerging Trends in Technological Innovation (2010): 393-400. Abstract
n/a
Costa, Viviana P., Mara E. M. Braga, Joana P. Guerra, Ana R. C. Duarte, Catarina M. M. Duarte, Eugénio O. B. Leite, Maria H. Gil, and Hermínio C. de Sousa. "{Development of therapeutic contact lenses using a supercritical solvent impregnation method}." Journal of Supercritical Fluids. 52 (2010): 306-316. Abstract

We present some selected results indicating the feasibility of preparing therapeutic finished ophthalmic articles, namely commercially available soft contact lenses, using a supercritical solvent impregnation (SSI) technique. Several commercial soft contact lenses were tested and, among these, four lenses were selected for more complete studies: Nelfilcon A (FocusDailies®, CIBA Vision), Omafilcon A (Proclear® Compatibles, CooperVision), Methafilcon A (Frequency® 55, CooperVision) and Hilafilcon B (SofLens® 59 Comfort, Bausch {&} Lomb). Supercritical carbon dioxide (scCO2) was the chosen supercritical fluid and two ophthalmic drugs were tested: flurbiprofen (a NSAID, hydrophobic) and timolol maleate (an anti-glaucoma drug, hydrophilic). The effects of operational pressure, of impregnation duration and of the addition of a cosolvent (ethanol) were studied on the overall drug loading yields. Depending on the experiment, we employed pressures from 9 up to 16 MPa and impregnation times from 30 up to 180 min. Temperature was kept constant and equal to 313 K. The employed depressurization rates were kept low and between 0.1 and 0.2 MPa/min. Results are discussed in terms of the employed operational conditions and taking in consideration all the possible interactions between supercritical fluids, drugs, cosolvents and the polymers which compose the employed hydrogel contact lenses. In vitro drug release experiments were carried out in order to evaluate the resulting drug release profiles. Obtained results were also compared with drug-loaded contact lenses obtained by conventional drug "soaking" in aqueous solutions. Results also proved that SSI can be considered as a viable, efficient and safe alternative for the impregnation of drugs, including those of hydrophobic character or presenting low aqueous solubility, into commercial soft contact lenses. SSI proved to be a "tunable" process since the variation of the employed operational conditions indicated that it is possible to control the amount of impregnated drug. In the end, the ophthalmic articles were recovered undamaged and without the presence of harmful solvent residues. This method also permits to process already prepared commercial contact lenses, without interfering with their manufacture methods and, after processing, store them for future use. © 2010 Elsevier B.V. All rights reserved.

Duarte, Ana Rita C., Jo?o F. Mano, and Rui L. Reis. "{Enzymatic degradation of 3D scaffolds of starch-poly-(?-caprolactone) prepared by supercritical fluid technology}." Polymer Degradation and Stability. 95 (2010): 2110-2117. Abstract

Starch-based polymers have been proposed for different tissue engineering applications due to their inherent properties. In this work, a polymeric blend of starch-poly-(?-caprolactone) (SPCL) was processed using supercritical fluid technology, namely, by supercritical assisted phase inversion. As SPCL is a biodegradable polymer, the matrices produced are susceptible of undergoing enzymatic degradation upon implantation in the human body. In vitro assessment of the enzymatic degradation of SPCL was carried out in different buffer solutions containing a-amylase and/or lipase. The effect of the presence ofthese enzymes was studied by monitoring different parameters in order to characterise both bulk and the surface of the scaffolds. As regards to bulk analysis, weight loss of the samples incubated for 1, 3, 7, 14 and 21 days was determined, further differential scanning calorimetry was carried out. The morphology of the scaffolds after these periods was analysed by micro-computed tomography (?-CT) and surface chemistry was characterised by infra-red spectroscopy and contact angle measurements. Results suggest that SPLC scaffolds undergo bulk degradation, which is typically characterised by hydrolysis of chemical bonds in the polymer chain at the centre of the matrix, resulting in a highly porous material. ? 2010 Elsevier Ltd. All rights reserved.

Santo, V. E., A. R. C. Duarte, M. E. Gomes, J. F. Mano, and R. L. Reis. "{Hybrid 3D structure of poly(d,l-lactic acid) loaded with chitosan/chondroitin sulfate nanoparticles to be used as carriers for biomacromolecules in tissue engineering}." Journal of Supercritical Fluids. 54 (2010). Abstract

In the tissue engineering (TE) field, the concept of producing multifunctional scaffolds, capable not only of acting as templates for cell transplantation but also of delivering bioactive agents in a controlled manner, is an emerging strategy aimed to enhance tissue regeneration. In this work, a complex hybrid release system consisting in a three-dimensional (3D) structure based on poly(d,l-lactic acid) (PDLLA) impregnated with chitosan/chondroitin sulfate nanoparticles (NPs) was developed. The scaffolds were prepared by supercritical fluid foaming at 200 bar and 35 °C, and were then characterized by scanning electron microscopy (SEM) and micro-CT. SEM also allowed to assess the distribution of the NPs within the structure, showing that the particles could be found in different areas of the scaffold, indicating a homogeneous distribution within the 3D structure. Water uptake and weight loss measurements were also carried out and the results obtained demonstrated that weight loss was not significantly enhanced although the entrapment of the NPs in the 3D structure clearly enhances the swelling of the structure. Moreover, the hybrid porous biomaterial displayed adequate mechanical properties for cell adhesion and support. The possibility of using this scaffold as a multifunctional material was further evaluated by the incorporation of a model protein, bovine serum albumin (BSA), either directly into the PDLLA foam or in the NPs that were eventually included in the scaffold. The obtained results show that it is possible to achieve different release kinetics, suggesting that this system is a promising candidate for dual protein delivery system for TE applications. © 2010 Elsevier B.V.

Sabil, Khalik M., Ana Rita C. Duarte, John Zevenbergen, Murni M. Ahmad, Suzana Yusup, Abdul A. Omar, and Cor J. Peters. "{Kinetic of formation for single carbon dioxide and mixed carbon dioxide and tetrahydrofuran hydrates in water and sodium chloride aqueous solution}." International Journal of Greenhouse Gas Control. 4 (2010): 798-805. AbstractWebsite

A laboratory-scale reactor system is built and operated to measure the kinetic of formation for single and mixed carbon dioxide-tetrahydrofuran hydrates. The T-cycle method, which is used to collect the kinetic data, is briefly discussed. For single carbon dioxide hydrate, the induction time decreases with the increase of the initial carbon dioxide pressure up to 2.96. MPa. Beyond this pressure, the induction time is becoming relatively constant with the increase of initial carbon dioxide pressure indicating that the liquid phase is completely supersaturated with carbon dioxide. Experimental results show that the inclusion of tetrahydrofuran reduces the induction time required for hydrate formation. These observations indicate hydrate nucleation process and onset growth are more readily to occur in the presence of tetrahydrofuran. In contrast, the presence of sodium chloride prolongs the induction time due to clustering of water molecules with the ions and the salting-out effects. It is also shown that the degree of subcooling required for hydrate formation is affected by the presence of tetrahydrofuran and sodium chloride in the hydrate forming system. The presence of tetrahydrofuran in the hydrate system significantly reduces the amount of carbon dioxide uptake. The apparent rate constant, k, for those systems are reported. © 2010.

Duarte, Ana Rita C., João F. Mano, and Rui L. Reis. "{Novel 3D scaffolds of chitosan-PLLA blends for tissue engineering applications: Preparation and characterization}." Journal of Supercritical Fluids. 54 (2010): 282-289. Abstract

This work addresses the preparation of 3D porous scaffolds of blends of chitosan and poly(l-lactic acid), CHT and PLLA, using supercritical fluid technology. Supercritical assisted phase-inversion was used to prepare scaffolds for tissue engineering purposes. The physicochemical and biological properties of chitosan make it an excellent material for the preparation of drug delivery systems and for the development of new biomedical applications in many fields from skin to bone or cartilage regeneration. On the other hand, PLLA is a synthetic biodegradable polymer widely used for biomedical applications. Supercritical assisted phase-inversion experiments were carried out in samples with different polymer ratios and different polymer solution concentrations. The effect of CHT:PLLA ratio and polymer concentration and on the morphology and topography of the scaffolds was assessed by SEM and Micro-CT. Infra-red spectroscopic imaging analysis of the scaffolds allowed a better understanding on the distribution of the two polymers within the matrix. This work demonstrates that supercritical fluid technology constitutes a new processing technology, clean and environmentally friendly for the preparation of scaffolds for tissue engineering using these materials. © 2010 Elsevier B.V.

Martins, A., A. R. C. Duarte, S. Faria, A. P. Marques, R. L. Reis, and N. M. Neves. "{Osteogenic induction of hBMSCs by electrospun scaffolds with dexamethasone release functionality}." Biomaterials. 31 (2010). Abstract

Electrospun structures were proposed as scaffolds owing to their morphological and structural similarities with the extracellular matrix found in many native tissues. These fibrous structures were also proposed as drug release systems by exploiting the direct dependence of the release rate of a drug on the surface area. An osteogenic differentiation factor, dexamethasone (DEX), was incorporated into electrospun polycaprolactone (PCL) nanofibers at different concentrations (5, 10, 15 and 20 wt.{%} polymer), in a single-step process. The DEX incorporated into the polymeric carrier is in amorphous state, as det ermined by DSC, and does not influence the typical nanofibers morphology. In vitro drug release studies demonstrated that the dexamethasone release was sustained over a period of 15 days. The bioactivity of the released dexamethasone was assessed by cultivating human bone marrow mesenchymal stem cells (hBMSCs) on 15 wt.{%} DEX-loaded PCL NFMs, under dexamethasone-absent osteogenic differentiation medium formulation. An increased concentration of alkaline phosphatase and deposition of a mineralized matrix was observed. Phenotypic and genotypic expression of osteoblastic-specific markers corroborates the osteogenic activity of the loaded growth/differentiation factor. Overall data suggests that the electrospun biodegradable nanofibers can be used as carriers for the sustained release of growth/differentiation factors relevant for bone tissue engineering strategies. © 2010 Elsevier Ltd.

Duarte, A. R. C., J. F. Mano, and R. L. Reis {Preparation of chitosan scaffolds for tissue engineering using supercritical fluid technology}. Vol. 636-637. Materials Science Forum, 636-637., 2010. Abstract

The aim of this study was to evaluate the possibility of preparing chitosan porous matrixes using supercritical fluid technology. Supercritical immersion precipitation technique was used to prepare scaffolds of a natural biocompatible polymer, chitosan, for tissue engineering purposes. The physicochemical and biological properties of chitosan make it an excellent material for the preparation of drug delivery systems and for the development of new biomedical applications in many fields from skin to bone or cartilage. Immersion precipitation experiments were carried out at different operational conditions in order to optimize the processing method. The effect of different organic solvents on the morphology of the scaffolds was assessed. Additionally, different parameters that influence the process were tested and the effect of the processing variables such as polymer concentration, temperature and pressure in the chitosan scaffold morphology, porosity and interconnectivity was evaluated by micro computed tomography. The preparation of a highly porous and interconnected structure of a natural material, chitosan, using a clean and environmentally friendly technology constitutes a new processing technology for the preparation of scaffolds for tissue engineering using these materials. © (2010) Trans Tech Publications.

Duarte, Ana Rita C., João F. Mano, and Rui L. Reis. "{Supercritical phase inversion of starch-poly($ε$-caprolactone) for tissue engineering applications}." Journal of Materials Science: Materials in Medicine. 21 (2010): 533-540. Abstract

In this work, a starch-based polymer, namely a blend of starch-poly(epsilon-caprolactone) was processed by supercritical assisted phase inversion process. This processing technique has been proposed for the development of 3D structures with potential applications in tissue engineering applications, as scaffolds. The use of carbon dioxide as non-solvent in the phase inversion process leads to the formation of a porous and interconnected structure, dry and free of any residual solvent. Different processing conditions such as pressure (from 80 up to 150 bar) and temperature (45 and 55 degrees C) were studied and the effect on the morphological features of the scaffolds was evaluated by scanning electron microscopy and micro-computed tomography. The mechanical properties of the SPCL scaffolds prepared were also studied. Additionally, in this work, the in vitro biological performance of the scaffolds was studied. Cell adhesion and morphology, viability and proliferation was assessed and the results suggest that the materials prepared are allow cell attachment and promote cell proliferation having thus potential to be used in some for biomedical applications.

2009
Dusseldorp, Marc, Richard Beecroft, and António Moniz Technology Assessment and Education: Introduction. University Library of Munich, Germany, 2009. Abstract

“Theory and Practice” of TA, which is referred to in the title of this journal “TATuP”, is usually addressed as a question of TA research. But science is more than research: the field of teaching requires just as much attention, both practically and theoretically. Therefore, a mere collection of individual teaching experiences and best practice examples does not provide a strong enough basis to discuss questions of TA teaching, these must also be embedded in a theoretical context and discussed in their relation to research. In this special issue, we aim to contribute to a combination of theoretical and practical approaches to the relation of TA and “Bildung”.

Conrath, K., AS Pereira, C. E. Martins, C. G. Timoteo, P. Tavares, S. Spinelli, J. Kinne, C. Flaudrops, C. Cambillau, S. Muyldermans, I. Moura, J. J. Moura, M. Tegoni, and A. Desmyter. "Camelid nanobodies raised against an integral membrane enzyme, nitric oxide reductase." Protein Sci. 18 (2009): 619-28. AbstractWebsite

Nitric Oxide Reductase (NOR) is an integral membrane protein performing the reduction of NO to N(2)O. NOR is composed of two subunits: the large one (NorB) is a bundle of 12 transmembrane helices (TMH). It contains a b type heme and a binuclear iron site, which is believed to be the catalytic site, comprising a heme b and a non-hemic iron. The small subunit (NorC) harbors a cytochrome c and is attached to the membrane through a unique TMH. With the aim to perform structural and functional studies of NOR, we have immunized dromedaries with NOR and produced several antibody fragments of the heavy chain (VHHs, also known as nanobodies). These fragments have been used to develop a faster NOR purification procedure, to proceed to crystallization assays and to analyze the electron transfer of electron donors. BIAcore experiments have revealed that up to three VHHs can bind concomitantly to NOR with affinities in the nanomolar range. This is the first example of the use of VHHs with an integral membrane protein. Our results indicate that VHHs are able to recognize with high affinity distinct epitopes on this class of proteins, and can be used as versatile and valuable tool for purification, functional study and crystallization of integral membrane proteins.