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2010
Duarte, A. R. C., J. F. Mano, and R. L. Reis {Preparation of chitosan scaffolds for tissue engineering using supercritical fluid technology}. Vol. 636-637. Materials Science Forum, 636-637., 2010. Abstract

The aim of this study was to evaluate the possibility of preparing chitosan porous matrixes using supercritical fluid technology. Supercritical immersion precipitation technique was used to prepare scaffolds of a natural biocompatible polymer, chitosan, for tissue engineering purposes. The physicochemical and biological properties of chitosan make it an excellent material for the preparation of drug delivery systems and for the development of new biomedical applications in many fields from skin to bone or cartilage. Immersion precipitation experiments were carried out at different operational conditions in order to optimize the processing method. The effect of different organic solvents on the morphology of the scaffolds was assessed. Additionally, different parameters that influence the process were tested and the effect of the processing variables such as polymer concentration, temperature and pressure in the chitosan scaffold morphology, porosity and interconnectivity was evaluated by micro computed tomography. The preparation of a highly porous and interconnected structure of a natural material, chitosan, using a clean and environmentally friendly technology constitutes a new processing technology for the preparation of scaffolds for tissue engineering using these materials. © (2010) Trans Tech Publications.

Duarte, Ana Rita C., João F. Mano, and Rui L. Reis. "{Supercritical phase inversion of starch-poly($ε$-caprolactone) for tissue engineering applications}." Journal of Materials Science: Materials in Medicine. 21 (2010): 533-540. Abstract

In this work, a starch-based polymer, namely a blend of starch-poly(epsilon-caprolactone) was processed by supercritical assisted phase inversion process. This processing technique has been proposed for the development of 3D structures with potential applications in tissue engineering applications, as scaffolds. The use of carbon dioxide as non-solvent in the phase inversion process leads to the formation of a porous and interconnected structure, dry and free of any residual solvent. Different processing conditions such as pressure (from 80 up to 150 bar) and temperature (45 and 55 degrees C) were studied and the effect on the morphological features of the scaffolds was evaluated by scanning electron microscopy and micro-computed tomography. The mechanical properties of the SPCL scaffolds prepared were also studied. Additionally, in this work, the in vitro biological performance of the scaffolds was studied. Cell adhesion and morphology, viability and proliferation was assessed and the results suggest that the materials prepared are allow cell attachment and promote cell proliferation having thus potential to be used in some for biomedical applications.

2009
Dusseldorp, Marc, Richard Beecroft, and António Moniz Technology Assessment and Education: Introduction. University Library of Munich, Germany, 2009. Abstract

“Theory and Practice” of TA, which is referred to in the title of this journal “TATuP”, is usually addressed as a question of TA research. But science is more than research: the field of teaching requires just as much attention, both practically and theoretically. Therefore, a mere collection of individual teaching experiences and best practice examples does not provide a strong enough basis to discuss questions of TA teaching, these must also be embedded in a theoretical context and discussed in their relation to research. In this special issue, we aim to contribute to a combination of theoretical and practical approaches to the relation of TA and “Bildung”.

Conrath, K., AS Pereira, C. E. Martins, C. G. Timoteo, P. Tavares, S. Spinelli, J. Kinne, C. Flaudrops, C. Cambillau, S. Muyldermans, I. Moura, J. J. Moura, M. Tegoni, and A. Desmyter. "Camelid nanobodies raised against an integral membrane enzyme, nitric oxide reductase." Protein Sci. 18 (2009): 619-28. AbstractWebsite

Nitric Oxide Reductase (NOR) is an integral membrane protein performing the reduction of NO to N(2)O. NOR is composed of two subunits: the large one (NorB) is a bundle of 12 transmembrane helices (TMH). It contains a b type heme and a binuclear iron site, which is believed to be the catalytic site, comprising a heme b and a non-hemic iron. The small subunit (NorC) harbors a cytochrome c and is attached to the membrane through a unique TMH. With the aim to perform structural and functional studies of NOR, we have immunized dromedaries with NOR and produced several antibody fragments of the heavy chain (VHHs, also known as nanobodies). These fragments have been used to develop a faster NOR purification procedure, to proceed to crystallization assays and to analyze the electron transfer of electron donors. BIAcore experiments have revealed that up to three VHHs can bind concomitantly to NOR with affinities in the nanomolar range. This is the first example of the use of VHHs with an integral membrane protein. Our results indicate that VHHs are able to recognize with high affinity distinct epitopes on this class of proteins, and can be used as versatile and valuable tool for purification, functional study and crystallization of integral membrane proteins.

Najmudin, S., C. Bonifacio, A. G. Duarte, S. R. Pauleta, I. Moura, J. J. Moura, and MJ Romao. "Crystallization and crystallographic analysis of the apo form of the orange protein (ORP) from Desulfovibrio gigas." Acta Crystallogr Sect F Struct Biol Cryst Commun. 65 (2009): 730-2. AbstractWebsite

The orange-coloured protein (ORP) from Desulfovibrio gigas is a 12 kDa protein that contains a novel mixed-metal sulfide cluster of the type [S(2)MoS(2)CuS(2)MoS(2)]. Diffracting crystals of the apo form of ORP have been obtained. Data have been collected for the apo form of ORP to 2.25 A resolution in-house and to beyond 2.0 A resolution at ESRF, Grenoble. The crystals belonged to a trigonal space group, with unit-cell parameters a = 43, b = 43, c = 106 A.

Moura, J., L. Krippahl, S. Pauleta, R. Almeida, and S. Del Acqua. "Molecular interactions/electron transfer protein complexes using Docking algorithms, spectroscopy (NMR) and site direct mutagenesis." Febs Journal. 276 (2009): 11. AbstractWebsite
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MP, Ribeiro, Espiga A, Silva D, Baptista P, Henriques J, Ferreira C, Silva JC, Borges JP, Pires E, Chaves P, and Correia IJ. "Development of a new chitosan hydrogel for wound dressing." WOUND REPAIR AND REGENERATION. 17 (2009): 817-824. Abstract
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Neagu, E. R., C. J. Dias, MC Lança, and J. N. Marat-Mendes. "The study of molecular movements in dielectrics using isothermal and non- isotehermal current measurements." 183 (2009): –-. Abstract
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C, Henriques, Vidinha R, Botequim D, Borges JP, and Silva JAMC. "A Systematic Study of Solution and Processing Parameters on Nanofiber Morphology Using a New Electrospinning Apparatus." JOURNAL OF NANOSCIENCE AND NANOTECHNOLOGY. 9 (2009): 3535-3545. Abstract
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Najmudin, S., C. Bonifacio, A. G. Duarte, S. R. Pauleta, I. Moura, JJG Moura, and MJ Romao. "Crystallization and crystallographic analysis of the apo form of the orange protein (ORP) from Desulfovibrio gigas. (vol F65, pg 730, 2009)." Acta Crystallographica Section F-Structural Biology and Crystallization Communications. 65 (2009): 856. AbstractWebsite
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Bakalova, Snezhana M., Filipe J. S. Duarte, Miglena K. Georgieva, Eurico J. Cabrita, and Gil A. Santos. "An Alternative Mechanism for Diels-Alder Reactions of Evans Auxiliary Derivatives." Chemistry-a European Journal. 15 (2009): 7665-7677. Abstract
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Duarte, Filipe J. S., Eurico J. Cabrita, Gernot Frenking, and Gil A. Santos. "Density Functional Study of Proline-Catalyzed Intramolecular Baylis-Hillman Reactions." Chemistry-a European Journal. 15 (2009): 1734-1746. Abstract
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Martins, Rodrigo, Luis Pereira, Pedro Barquinha, Goncalo Goncalves, Isabel Ferreira, Carlos Dias, N. Correia, M. Dionisio, M. Silva, Nuno Correia, and Elvira Fortunato. "Self-sustained n-Type Memory Transistor Devices Based on Natural Cellulose Paper Fibers." Journal of Information Display. 10 (2009): 149-157. AbstractWebsite
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Paulino, Hervé, Paulo Cancela, and Tiago Franco. "Orchestration of Middleware Services." On the Move to Meaningful Internet Systems: OTM 2009 Workshops, Confederated International Workshops and Posters. Eds. Pilar Herrero Robert Meersman, and Tharam S. Dillon. Lecture Notes in Computer Science. Springer-Verlag, 2009. 1-3. Abstract
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Valtchev, {Stanimir Stoyanov}, and DEE Group Author. "Control strategy for efficient operation of super-resonant SLSR (contactless) converters." -. 2009. 527-530. Abstract

A new faster control method is presented, inattempt to achieve stable operation and higher efficiency of anySeries Loaded Series Resonant (SLSR) power converter, andespecially when the application requires contactless energytransfer. This instantaneously reacting control method is basedon calculated individual energy portions delivered to theresonant circuit. Its viability is demonstrated by simulation of ananalogue circuit implementation.

Leite, {João Alexandre Carvalho Pinheiro}, and {José Júlio Alves} Alferes. "Resource allocation with answer-set programming." IFAAMAS. Eds. C. Sierra, C. Castelfranchi, KS Decker, and JS Sichman. Vol. 1. IFAAMAS, 2009. 649-656. Abstract
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Bonfait, G., I. Catarino, J. Afonso, D. Martins, M. Linder, and L. Duband. "20 K Energy Storage Unit." Cryogenics. 49 (2009): 326-333. Abstract

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Schoch, CL, PW Crous, JZ Groenewald, EWA Boehm, TI Burgess, J. de Gruyter, GS de Hoog, LJ Dixon, M. Grube, C. Gueidan, Y. Harada, S. Hatakeyama, K. Hirayama, T. Hosoya, SM Huhndorf, KD Hyde, EBG Jones, J. Kohlmeyer, A. Kruys, YM Li, R. Lucking, HT Lumbsch, L. Marvanova, JS Mbatchou, AH Mcvay, AN Miller, GK Mugambi, L. Muggia, MP Nelsen, P. Nelson, CA Owensby, AJL Phillips, S. Phongpaichit, SB Pointing, V. Pujade-Renaud, HA Raja, ER Plata, B. Robbertse, C. Ruibal, J. Sakayaroj, T. Sano, L. Selbmann, CA Shearer, T. Shirouzu, B. Slippers, S. Suetrong, K. Tanaka, B. Volkmann-Kohlmeyer, MJ WINGFIELD, AR Wood, JHC Woudenberg, H. Yonezawa, Y. Zhang, and JW Spatafora. "A class-wide phylogenetic assessment of Dothideomycetes." Studies in Mycology. 64 (2009): 1-15. Abstract

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Dimitrovová, Z., and J. N. Varandas. "Critical velocity of a load moving on a beam with a sudden change of foundation stiffness: Applications to high-speed trains." Computers & Structures. 87 (2009): 1224-1232. Abstract

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Martins, D., I. Catarino, U. Schroder, J. Ricardo, R. Patricio, L. Duband, and G. Bonfait. "CUSTOMIZABLE GAS-GAP HEAT SWITCH." CEC 20. Tucson, AZ, USA: Advances in Cryogenic Engineering, 55, pp. 1652-7 (2010), 2009. Abstract

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Afonso, J., I. Catarino, D. Martins, J. Ricardo, R. Patricio, L. Duband, and G. Bonfait. "Energy Storage Unit: solid state demonstrators at 20 K and 6 K." Space Cryogenics Workshop. Arcadia, CA, USA: Cryogenic Society of America, 2009. Abstract

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Catarino, I., J. Afonso, D. Martins, L. Duband, and G. Bonfait. "Gas gap thermal switches using neon or hydrogen and sorption pump." Vacuum. 83 (2009): 1270-1273. Abstract

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Catarino, I., L. Duband, and G. Bonfait. "Hydrogen and Neon Gas-Gap Heat Switch." Cryocoolers. 15 (2009): 553-559. Abstract

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Lourenço, João M., Nuno Preguiça, Ricardo J. Dias, João Nuno Silva, João Garcia, and Luís Veiga NGenVM: New Generation Execution Environments. EuroSys. Nuremberg, Germany, 2009. Abstractngenvm-poster.pdf

This document describes a work-in-progress development of NGen-VM, a distributed infrastructure that manages execution environments with run-time and programming language support targeting applications developed in the Java programming language, deployed over clusters of many-core computers. For each running application or suite of related applications, a dedicated single-system image will be provided, regardless of the concurrent threads running on a single machine (on several cores) or scattered on different computers. Such system images rely on a single model for concurrency management (Transactional Shared Memory Model), in order fill the gap between the hardware infrastructure of clusters of many-core nodes and the application runtime that is independent from that hardware infrastructure. Interactions between threads in the same tasks will be supported by a Transactional Memory framework that provides the programming language with Atomic and Isolated code regions. Interactions between thread on different machines will also use the Transactional Memory model, but now resorting to a Distributed Shared Memory abstraction.

Lourenço, João M., Ricardo J. Dias, João Luís, Miguel Rebelo, and Vasco Pessanha. "Understanding the Behavior of Transactional Memory Applications." Proceedings of the 7th Workshop on Parallel and Distributed Systems: Testing, Analysis, and Debugging (PADTAD'09). {PADTAD}'09. New York, NY, USA: ACM, 2009. 31-39. Abstractpadtad2009.pdf

Transactional memory is a new trend in concurrency control that was boosted by the advent of multi-core processors and the near to come many-core processors. It promises the performance of finer grain with the simplicity of coarse grain threading. However, there is a clear absence of software development tools oriented to the transactional memory programming model, which is confirmed by the very small number of related scientific works published until now. This paper describes ongoing work. We propose a very low overhead monitoring framework, developed specifically for monitoring TM computations, that collects the transactional events into a single log file, sorted in a global order. This framework is then used by a visualization tool to display different types of charts from two categories: statistical charts and thread-time space diagrams. These last diagrams are interactive, allowing to identify conflicting transactions. We use the visualization tool to analyse the behavior of two different, but similar, testing applications, illustrating how it can be used to better understand the behavior of these transactional memory applications.