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2017
Marzola, Marco, Octávio Mateus, Neil H. Shubin, and Lars B. Clemmensen. "Cyclotosaurus naraserluki, sp. nov., a new Late Triassic cyclotosaurid (Amphibia, Temnospondyli) from the Fleming Fjord Formation of the Jameson Land Basin (East Greenland)." Journal of Vertebrate Paleontology (2017): e1303501. AbstractWebsite
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Cerdeira, Jorge Orestes, Isabel Cristina Lopes, and Eliana Costa e Silva. "Scheduling the Repairment of Aircrafts{\textquotesingle} Engines." 2017 International Conference on Control, Artificial Intelligence, Robotics {&} Optimization ({ICCAIRO}). {IEEE}, 2017. Abstract
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Hussain, Abid, Ana T. S. Semeano, Susana I. C. J. Palma, Ana S. Pina, José Almeida, Bárbara F. Medrado, Ana C. C. S. Pádua, Ana L. Carvalho, Madalena Dionísio, Rosamaria W. C. Li, Hugo Gamboa, Rein V. Ulijn, Jonas Gruber, and Ana C. A. Roque. "Tunable gas sensing gels by cooperative assembly." Advanced Functional Materials. just accep (2017): xx. AbstractWebsite

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Manso, M., S. Pessanha, M. Guerra, J. L. Figueirinhas, J. P. Santos, and M. L. Carvalho. "Unveiling the Third Secret of Fátima: μ-XRF quantitative characterization and 2D elemental mapping." Spectrochimica Acta Part B: Atomic Spectroscopy. 130 (2017): 35-38. AbstractWebsite

Spectrochimica Acta Part B: Atomic Spectroscopy, 130 (2017) 35-38. doi:10.1016/j.sab.2017.02.006

Kup Aylikci, N., J. M. Sampaio, A. Kahoul, V. Aylikci, İ. H. Karahan, M. Guerra, J. P. Santos, J. P. Marques, and E. Tirasoglu. "The investigation of K-shell fluorescence parameters of Zn-Fe alloys with different grain size and microstrain values." X-Ray Spectrometry. 406 (2017): 1481-10. AbstractWebsite

It is known that zinc alloys with iron group metals have better corrosion resistance than pure zinc. Owing to the corrosion resistance of these alloys, Zn–Fe coatings are widely used in automotive industry...

Cardoso, Pedro, Pedro Amaro, Jose Paulo Santos, Joaquim T. de Assis, and Maria Luisa Carvalho. "Determination of Nickel and Manganese Contaminants in Pharmaceutical Iron Supplements Using Energy Dispersive X-ray Fluorescence." Applied Spectroscopy. 71 (2017): 432-437. AbstractWebsite
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Pires, Virgínia M. R., Pedro M. M. Pereira, Joana L. A. Brás, Márcia Correia, Vânia Cardoso, Pedro Bule, Victor D. Alves, Shabir Najmudin, Immacolata Venditto, Luís M. A. Ferreira, Maria João Romão, Ana Luísa Carvalho, Carlos M. G. A. Fontes, and Duarte Miguel Prazeres. "Stability and ligand promiscuity of type A carbohydrate-binding modules are illustrated by the structure of Spirochaeta thermophila StCBM64C." Journal of Biological Chemistry. 292 (2017): 4847-4860. AbstractWebsite

Deconstruction of cellulose, the most abundant plant cell wall polysaccharide, requires the cooperative activity of a large repertoire of microbial enzymes. Modular cellulases contain non-catalytic type A Carbohydrate-Binding Modules (CBMs) that specifically bind to the crystalline regions of cellulose, thus promoting enzyme efficacy through proximity and targeting effects. Although type A CBMs play a critical role in cellulose recycling, their mechanism of action remains poorly understood. Here we produced a library of recombinant CBMs representative of the known diversity of type A modules. The binding properties of 40 CBMs, in fusion with an N-terminal green fluorescence protein (GFP) domain, revealed that type A CBMs possess the ability to recognize different crystalline forms of cellulose and chitin over a wide range of temperatures, pHs and ionic strengths. A Spirochaeta thermophila CBM64, in particular, displayed plasticity in its capacity to bind both crystalline and soluble carbohydrates under a wide range of extreme conditions. The structure of S. thermophila StCBM64C revealed an untwisted, flat, carbohydrate-binding interface comprising the side chains of four tryptophan residues in a coplanar linear arrangement. Significantly, two highly conserved asparagine side chains, each one located between two tryptophan residues, are critical to insoluble and soluble glucan recognition but not to bind xyloglucan. Thus, CBM64 compact structure and its extended and versatile ligand interacting platform illustrates how type A CBMs target their appended plant cell wall degrading enzymes to a diversity of recalcitrant carbohydrates under a wide range of environmental conditions.

Moreno-Azanza, Miguel, Blanca Bauluz, José Ignacio Canudo, and Octávio Mateus. "The conservative structure of the ornithopod eggshell: electron backscatter diffraction characterization of Guegoolithus turolensis from the Early Cretaceous of Spain." Journal of Iberian Geology. 43 (2017): 235-243. AbstractWebsite
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Martins, Jorge, Pydi Bahubalindruni, Ana Rovisco, Asal Kiazadeh, Rodrigo Martins, Elvira Fortunato, and Pedro Barquinha. "{Bias Stress and Temperature Impact on InGaZnO TFTs and Circuits}." Materials. 10 (2017): 680. AbstractWebsite

This paper focuses on the analysis of InGaZnO thin-film transistors (TFTs) and circuits under the influence of different temperatures and bias stress, shedding light into their robustness when used in real-world applications. For temperature-dependent measurements, a temperature range of 15 to 85 • C was considered. In case of bias stress, both gate and drain bias were applied for 60 min. Though isolated transistors show a variation of drain current as high as 56% and 172% during bias voltage and temperature stress, the employed circuits were able to counteract it. Inverters and two-TFT current mirrors following simple circuit topologies showed a gain variation below 8%, while the improved robustness of a cascode current mirror design is proven by showing a gain variation less than 5%. The demonstration that the proper selection of TFT materials and circuit topologies results in robust operation of oxide electronics under different stress conditions and over a reasonable range of temperatures proves that the technology is suitable for applications such as smart food packaging and wearables.

Silva, M. A. G., H. C. Biscaia, and C. Chastre. "Aging of some GFRP-concrete joints under external pressure." AIS2017 - 6th Asia-Pacific Conference on FRP in Structures. Singapore 2017. Abstract

Compressive stresses created by lateral external pressure on laminates are an important factor on success of the use of mechanical anchorage of externally bonded reinforcement (EBR). A program of double shear tests with imposed normal stresses on GFRP plates bonded to a concrete surface and a bond-slip model are described. Results generated numerically are summarized and used as reference values against those obtained after accelerated aging by freeze-thaw cycles, and temperature cycles of the same amplitude but range closer to the glass vitreous temperature. Numerical modelling showed that the bonded length is fully stressed prior to failure. Increasing lateral pressure led to a larger maximum bond stress and strength at the interface. Cohesion, fracture energy and internal friction angle changes are calculated and used to analyze the effects of the aforementioned cycles on the expected behaviour of the GFRP-concrete joints, namely at the interface.

Guerra, M., P. Amaro, J. P. Santos, and P. Indelicato. "Relativistic calculations of screening parameters and atomic radii of neutral atoms." Atomic Data and Nuclear Data Tables. 117-118 (2017): 439-457. AbstractWebsite

Atomic Data and Nuclear Data Tables, 117-118 (2017) 439-457. doi:10.1016/j.adt.2017.01.001

Monteiro, António, Carlos Chastre, Hugo Biscaia, and Noel Franco. "Reforço de vigas em betão armado com armaduras exteriores de FRP." Revista Internacional TechITT. 15 (2017): 48-60. AbstractWebsite

A utilização de Polímeros Reforçados com Fibras (FRP) no reforço de estruturas de Betão Armado (BA) tem tido cada vez mais aceitação devido à sua elevada resistência e rigidez, baixo peso específico e excelente resistência aos efeitos dos agentes ambientais. No entanto, actualmente, é comum utilizarem-se técnicas de reforço que dificilmente permitem tirar partido da resistência total destes materiais. Com o objectivo de explorar a capacidade total de Polímeros Reforçados com Fibras de Carbono (CFRP), foram estudadas e desenvolvidas duas novas técnicas de reforço de vigas à flexão designadas por Continuous Reinforcement Embedded at Ends (CREatE) e Horizontal Near Surface Mounted Reinforcement (HNSMR). Posteriormente realizou-se um estudo comparativo entre o desempenho destes sistemas de reforço e o de duas outras técnicas já estudadas e usuais, nomeadamente os sistemas Externally Bonded Reinforcement (EBR) e Near Surface Mounted Reinforcement (NSMR). A técnica CREatE provou ser a mais eficaz de todas as alternativas testadas mobilizando a totalidade do compósito de CFRP e dotando as vigas de BA com uma maior capacidade resistente e com uma ductilidade mais elevada.Como complemento deste trabalho experimental, desenvolveu-se também um programa de cálculo em MATLAB, capaz de simular o problema em estudo através de um modelo numérico de análise não linear através do equilíbrio de secções. A representatividade dos dados obtidos foi verificada através de uma análise comparativa entre os valores numéricos e os obtidos experimentalmente.The use of Fiber Reinforced Polymers (FRP) in order to strengthen Reinforced Concrete (RC) structures has been increasingly accepted due to their strength and stiffness, low weight and excellent resistance to the effects of environmental aggressive agents. However, the bonding techniques available and described in the literature can not allow the full use of the mechanical properties of these materials and premature failures are often observed and described by several researchers. In order to explore the full capacity of CFRP composites, two new bonding strengthening techniques of RC beams when subjected to 4-point bending tests were studied and developed. For these new techniques, the designation of Continuous Reinforcement Embedded at Ends (CREatE) and Horizontal Near Surface Mounted Reinforcement (HNSMR) has been assigned. Posteriorly, a comparative study has been carried out between those strengthening systems performance and two traditional techniques, namely, the Externally Bonded Reinforcement (EBR) and Near Surface Mounted Reinforcement (NSMR). The CREatE technique has proved to be the most effective of all alternatives tested, with the full utilization of the CFRP composite and the highest strength, combined with the highest ductility. A code using MATLAB software was developed as a complement of this experimental work, which is able to simulate the problem under study through a nonlinear numerical model based on the equilibrium of sections. The representativeness of the numerical data has been verified afterwards through a comparative analysis between those and the experimental results.

Maiti, B. K., L. B. Maia, S. R. Pauleta, I. Moura, and J. J. Moura. "Protein-Assisted Formation of Molybdenum Heterometallic Clusters: Evidence for the Formation of S2MoS2-M-S2MoS2 Clusters with M = Fe, Co, Ni, Cu, or Cd within the Orange Protein." Inorg Chem (2017). AbstractWebsite

The Orange Protein (ORP) is a small bacterial protein, of unknown function, that harbors a unique molybdenum/copper (Mo/Cu) heterometallic cluster, [S2MoVIS2CuIS2MoVIS2]3-, noncovalently bound. The apo-ORP is able to promote the formation and stabilization of this cluster, using CuII- and MoVIS42- salts as starting metallic reagents, to yield a Mo/Cu-ORP that is virtually identical to the native ORP. In this work, we explored the ORP capability of promoting protein-assisted synthesis to prepare novel protein derivatives harboring molybdenum heterometallic clusters containing iron, cobalt, nickel, or cadmium in place of the "central" copper (Mo/Fe-ORP, Mo/Co-ORP, Mo/Ni-ORP, or Mo/Cd-ORP). For that, the previously described protein-assisted synthesis protocol was extended to other metals and the Mo/M-ORP derivatives (M = Cu, Fe, Co, Ni, or Cd) were spectroscopically (UV-visible and electron paramagnetic resonance (EPR)) characterized. The Mo/Cu-ORP and Mo/Cd-ORP derivatives are stable under oxic conditions, while the Mo/Fe-ORP, Mo/Co-ORP, and Mo/Ni-ORP derivatives are dioxygen-sensitive and stable only under anoxic conditions. The metal and protein quantification shows the formation of 2Mo:1M:1ORP derivatives, and the visible spectra suggest that the expected {S2MoS2MS2MoS2} complexes are formed. The Mo/Cu-ORP, Mo/Co-ORP, and Mo/Cd-ORP are EPR-silent. The Mo/Fe-ORP derivative shows an EPR S = 3/2 signal (E/D approximately 0.27, g approximately 5.3, 2.5, and 1.7 for the lower M= +/-1/2 doublet, and g approximately 5.7 and 1.7 (1.3 predicted) for the upper M = +/-3/2 doublet), consistent with the presence of either one S = 5/2 FeIII antiferromagnetically coupled to two S = 1/2 MoV or one S = 3/2 FeI and two S = 0 MoVI ions, in both cases in a tetrahedral geometry. The Mo/Ni-ORP shows an EPR axial S = 1/2 signal consistent with either one S = 1/2 NiI and two S = 0 MoVI or one S = 1/2 NiIII antiferromagnetically coupled to two S = 1/2 MoV ions, in both cases in a square-planar geometry. The Mo/Cu-ORP and Mo/Cd-ORP are described as {MoVI-CuI-MoVI} and {MoVI-CdII-MoVI}, respectively, while the other derivatives are suggested to exist in at least two possible electronic structures, {MoVI-MI-MoVI} <--> {MoV-MIII-MoV}.

Pessanha, Sofia, Ana Samouco, Ricardo Adão, Maria Luisa Carvalho, Jose Paulo Santos, and Pedro Amaro. "Detection limits evaluation of a portable energy dispersive X-ray fluorescence setup using different filter combinations." X-Ray Spectrometry. 46 (2017): 102-106. AbstractWebsite

In this paper, we study the performance of a portable energy dispersive X‐ray fluorescence spectrometer by making use of different filter configurations at the X‐ray tube output. To fulfill this purpose,...

Kowacz, Magdalena, Mateusz Marchel, Lina Juknaité, José M. S. S. Esperança, Maria João Romão, Ana Luísa Carvalho, and Luís Paulo N. Rebelo. "Infrared light-induced protein crystallization. Structuring of protein interfacial water and periodic self-assembly." Journal of Crystal Growth. 457 (2017): 362-368. AbstractWebsite

We show that a physical trigger, a non-ionizing infrared (IR) radiation at wavelengths strongly absorbed by liquid water, can be used to induce and kinetically control protein (periodic) self-assembly in solution. This phenomenon is explained by considering the effect of IR light on the structuring of protein interfacial water. Our results indicate that the IR radiation can promote enhanced mutual correlations of water molecules in the protein hydration shell. We report on the radiation-induced increase in both the strength and cooperativeness of H-bonds. The presence of a structured dipolar hydration layer can lead to attractive interactions between like-charged biomacromolecules in solution (and crystal nucleation events). Furthermore, our study suggests that enveloping the protein within a layer of structured solvent (an effect enhanced by IR light) can prevent the protein non-specific aggregation favoring periodic self-assembly. Recognizing the ability to affect protein-water interactions by means of IR radiation may have important implications for biological and bio-inspired systems.

Socratous, Josephine, Shun Watanabe, Kulbinder K. Banger, Christopher N. Warwick, Rita Branquinho, Pedro Barquinha, Rodrigo Martins, Elvira Fortunato, and Henning Sirringhaus. "{Energy-dependent relaxation time in quaternary amorphous oxide semiconductors probed by gated Hall effect measurements}." Physical Review B. 95 (2017): 045208. AbstractWebsite

Despite the success of exploiting the properties of amorphous oxide semiconductors for device applications, the charge transport in these materials is still not clearly understood. The observation of a definite Hall voltage suggests that electron transport in the conduction band is free-electron-like. However, the temperature dependence of the Hall and field-effect mobilities cannot be explained using a simple bandlike model. Here, we perform gated Hall effect measurements in field-effect transistors, which allow us to make two independent estimates of the charge carrier concentration and determine the Hall factor providing information on the energy dependence of the relaxation time. We demonstrate that the Hall factor in a range of sputtered and solution-processed quaternary amorphous oxides, such as a-InGaZnO, is close to two, while in ternary oxides, such as InZnO, it is near unity. This suggests that quaternary elements like Ga act as strong ionized impurity scattering centers in these materials.

Silva, A. L. M., S. Cirino, M. L. Carvalho, M. Manso, S. Pessanha, C. D. R. Azevedo, L. F. N. D. Carramate, J. P. Santos, M. Guerra, and J. F. C. A. Veloso. "Elemental mapping in a contemporary miniature by full-field X-ray fluorescence imaging with gaseous detector vs. scanning X-ray fluorescence imaging with polycapillary optics." (2017): 1-7. Abstract

Spectrochimica Acta Part B: Atomic Spectroscopy, 129 (2016) 1-7. doi:10.1016/j.sab.2016.12.006

Chiari, M., E. Alves, Bogdanović I. Radović, J. Cruz, L. Csedreki, M. Fonseca, D. Galaviz, A. Henriques, M. Jak{\v s}ić, A. P. Jesus, O. Kakuee, Á. Z. Kiss, A. Lagoyannis, F. Louren{\c c}o, H. Lu{\'ıs, J. Machado, B. Melon, C. K. Nuviadenu, L. Salvestrini, N. Sharifzadeh, Z. Siketić, G. Á. Sz{\'ıki, Z. Szikszai, P. Teubig, P. Velho, I. Zamboni, and M. Zarza. "{Measurement of proton induced $\gamma$-ray emission cross sections on Na from 1.0 to 4.1 MeV}." Nuclear Inst. and Methods in Physics Research, B (2017): 1-11. AbstractWebsite
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Vicente, António T., Andreia Araújo, Diana Gaspar, Lídia Santos, Ana C. Marques, Manuel J. Mendes, LuÍs Pereira, Elvira Fortunato, and Rodrigo Martins. "{Optoelectronics and Bio Devices on Paper Powered by Solar Cells}." Nanostructured Solar Cells. InTech, 2017. Abstract

The employment of printing techniques as cost-effective methods to fabricate low cost, flexible, disposable and sustainable solar cells is intimately dependent on the substrate properties and the adequate electronic devices to be powered by them. Among such devices, there is currently a growing interest in the development of user-oriented and multipurpose systems for intelligent packaging or on-site medical diagnostics, which would greatly benefit from printable solar cells as their energy source for autonomous operation. This chapter first describes and analyzes different types of cellulose-based substrates for flexible and cost effective optoelectronic and bio devices to be powered by printed solar cells. Cellulose is one of the most promising platforms for green recyclable electronics and it is fully compatible with large-scale printing techniques, although some critical requirements must be addressed. Paper substrates exist in many forms. From common office paper, to packaging cardboard used in the food industry, or nanoscale engineered cellulose (e.g. bacterial cellulose). However, it is the structure and content of paper that determines its end use. Secondly, proof-of-concept of optoelectronic and bio devices pro-duced by inkjet printing are described and show the usefulness of solar cells as a power source or as a chemical reaction initiator for sensors.

Salgueiro, Daniela, Asal Kiazadeh, Rita Branquinho, Lídia Santos, Pedro Barquinha, Rodrigo Martins, and Elvira Fortunato. "{Solution based zinc tin oxide TFTs: the dual role of the organic solvent}." Journal of Physics D: Applied Physics. 50 (2017): 065106. AbstractWebsite

Chemical solution deposition is a low cost, scalable and high performance technique to obtain metal oxide thin films. Recently, solution combustion synthesis has been introduced as a chemical route to reduce the processing temperature. This synthesis method takes advantage of the chemistry of the precursors as a source of energy for localized heating. According to the combustion chemistry some organic solvents can have a dual role in the reaction, acting both as solvent and fuel. In this work, we studied the role of 2-methoxyethanol in solution based synthesis of ZTO thin films and its influence on the performance of ZTO TFTs. The thermal behaviour of ZTO precursor solutions confirmed that 2-methoxyethanol acts simultaneously as a solvent and fuel, replacing the fuel function of urea. The electrical characterization of the solution based ZTO TFTs showed a slightly better performance and lower variability under positive gate bias stress when urea was not used as fuel, confirming that the excess fuel contributes negatively to the device operation and stability. Solution based ZTO TFTs demonstrated a low hysteresis ($Δ$V = −0.3 V) and a saturation mobility of 4–5 cm2 V−1 s−1.

Sallem, A., P. Pereira, and M. Fakhfakh. "Automatic sensitivity analysis tool for analog active filter." 2017 24th IEEE International Conference on Electronics, Circuits and Systems (ICECS). 2017. 124-127. Abstract

In this paper we deal with analog active filter design using discrete components taking into consideration tolerance effects. Sensitivity analysis is performed to determine the most influential components in the considered circuit, thus relative higher precision is offered to those parameters. Further, an in-loop optimization technique is considered, thus actual IC models are handled. An application example is presented. HSpice simulation results, supported by Monte Carlo analysis, are given to highlight efficiency of the proposed selection technique.

Antunes, V., A. C. Freire, L. Quaresma, and R. Micaelo. "Evaluation of waste materials as alternative sources of filler in asphalt mixtures." Materials and Structures. 50 (2017): 254. AbstractWebsite

There are many different ways to reduce the construction industry's impact on environment. The incorporation of waste in the fabrication of construction materials may be beneficial for both the waste management sector and the construction industry. The aim of this research was to investigate the use of three different waste materials (construction and demolition waste, brick powder and fly ash) as filler in asphalt mixtures. Limestone filler was used as reference material. The materials were characterized in terms of their geometrical, physical and chemical properties, and the interaction with bitumen was assessed with two mastic test methods using four different bitumens. The specific surface of waste materials shows a wide-ranging variation due to material specific shape and texture of particles. However, the Rigden voids and bitumen number tests adequately measure the stiffening effect of these materials. The delta ring and ball test results showed there is a good relation with the filler content when the results are affected by the bitumen type. The f/b ratio for a specific bitumen–filler combination can be determined from the maximum filler-to-bitumen ratio and the recommended stiffening increase. The mastics with these waste materials showed strong resistance to water damage.

Amaro, Pedro, Jose Paulo Santos, Ana Samouco, Ricardo Adão, Luís Souto Martins, Sebastian Weber, Stanislav Tashenov, Maria Luisa Carvalho, and Sofia Pessanha. "Validation of the Geant4 Monte Carlo package for X-ray fluorescence spectroscopy in triaxial geometry." Spectrochimica Acta Part B: Atomic Spectroscopy. 130 (2017): 60-66. AbstractWebsite

Spectrochimica Acta Part B: Atomic Spectroscopy, 130 (2017) 60-66. doi:10.1016/j.sab.2017.02.012

Mateus, Octávio, Marco Marzola, Anne S. Schulp, Louis L. Jacobs, Michael J. Polcyn, Vladimir Pervov, António Ol{\'ı}mpio Gonçalves, and Maria Luisa Morais. "Angolan ichnosite in a diamond mine shows the presence of a large terrestrial mammaliamorph, a crocodylomorph, and sauropod dinosaurs in the Early Cretaceous of Africa." Palaeogeography, Palaeoclimatology, Palaeoecology. 471 (2017): 220-232. AbstractWebsite
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