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1999
Kuhlmann, Stefan, Patries Boekholt, Luke Georghiou, Ken Guy, Jean-Alain Heraud, Philippe Laredo, Tarmo Lemola, Denis Loveridge, Terttu Luukkonen, António Moniz, Wolfgang Polt, and Ri Improving Distributed Intelligence in Complex Innovation Systems. University Library of Munich, Germany, 1999. Abstract

Science and technology (S&T) are considered to be a central source, or at least a basic medium, of societal and industrial innovation, while innovation is conceived to basically feed the regeneration of our welfare. The suppliers of S&T in Europe as well as the users of their „products“, are confronted with a number of challenges today. We want to stress here that it was not the primary goal of our Advanced Science & Technology Policy Planning (ASTPP) Network to come up with proposals how the strategic character of European S&T policies could be strengthened. The ASTPP-network instead focuses on one aspect: the provision of strategic intelligence necessary to identify and develop strategic choices. The underlying hypothesis is that the existing body of experiences with technology foresight, technology assessment and S/T policy evaluation provides a basis for the development of an advanced S&T policy „planning“ approach by trying to enhance, interlink or even integrate the growing, but still dispersed experience in these three areas of intelligence. By „intelligent“ we mean that the inter-relatedness of S&T, industrial efforts, societal needs and political interventions becomes more transparent so that interactive collaboration between them will be facilitated.

R, Jardim-Goncalves, Sousa P, Pimentao JP, Steiger-Garcao A, Grilo A, and Tadeu L. "Integration of planning and control activities for building and construction: Experiencing standards." DURABILITY OF BUILDING MATERIALS AND COMPONENTS 8, VOLS 1-4, PROCEEDINGS. 1 (1999): 2180-2188. Abstract
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Almeida, G., J. Lampreia, JJG Moura, and I. Moura. "New biochemical studies on nitrite reductase from Desulfovibrio desulfuricans ATCC 27774." JOURNAL OF INORGANIC BIOCHEMISTRY. 74 (1999): 63.
Silva, Fernando, Hervé Paulino, and Luís Lopes. "di_pSystem: A Parallel Programming System for Distributed Memory Architectures." Recent Advances in Parallel Virtual Machine and Message Passing Interface, 6th European PVM/MPI Users' Group Meeting, Barcelona, Spain, September 26-29, 1999, Proceedings. Eds. Jack Dongarra, Emilio Luque, and Tomàs Margalef. Vol. 1697. Lecture Notes in Computer Science, 1697. Sabadell, Spain: Springer-Verlag, 1999. 525-532. Abstract

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Santos Oliveira, J. F., N. Lapa, and J. Morais Eutrofização: a flor da água. Lisboa: IPQ/EPAL, 1999.Website
Cunha, José C., Pedro D. Medeiros, Vitor Duarte, João Lourenço, and Cecilia Gomes. "An Experience in Building a Parallel and Distributed Problem-Solving Environment." Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications (PDPTA'99). CSREA Press, 1999. 1804-1809. Abstractpdpta99.pdf

We describe our experimentation with the design and implementation of specific environments, consisting of heterogeneous computational, visualization, and control components. We illustrate the approach with the design of a problem–solving environment supporting the execution of genetic algorithms. We describe a prototype supporting parallel execution, visualization, and steering. A life cycle for the development of applications based on genetic algorithms is proposed.

Cunha, José C., Pedro D. Medeiros, Vitor Duarte, João Louren{\c c}o, and Cecilia Gomes. "An Experience in Building a Parallel and Distributed Problem-Solving Environment." PDPTA 1999: Proceedings of the International Conference on Parallel and Distributed Processing Techniques and Applications. CSREA Press, 1999. 1804-1809. Abstract
We describe our experimentation with the design and implementation of specific environments, consisting of heterogeneous computational, visualization, and control components. We illustrate the approach with the design of a problem–solving environment supporting the execution of genetic algorithms. We describe a prototype supporting parallel execution, visualization, and steering. A life cycle for the development of applications based on genetic algorithms is proposed.
Alferes, JJ, LM Pereira, H. Przymusinska, and TC Przymusinski. "LUPS - A language for updating logic programs." LOGIC PROGRAMMING AND NONMONOTONIC REASONING. Eds. M. Gelfond, N. Leone, and G. Pfeifer. LECTURE NOTES IN ARTIFICIAL INTELLIGENCE. SPRINGER-VERLAG BERLIN, 1999. 162-176. Abstract
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Allain, R., P. Taquet, B. Battail, J. Dejax, P. Richir, M. Veran, F. Limon-Duparcmeur, and et al. "A new genus of sauropod dinosaur from the Gres superieurs formation (Aptian-Albian) of Laos." Comptes Rendus de l'Academie des Sciences Series IIA Earth and Planetary Science. 329 (1999): 609-616. Abstract
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Allain, R., P. Taquet, B. Battail, J. Dejax, P. Richir, M. Véran, F. Limon-Duparcmeur, and et al. "A new genus of sauropod dinosaur from the Gres superieurs formation (Aptian-Albian) of Laos | Un nouveau genre de dinosaure sauropode de la formation des Gres superieurs (Aptien-Albien) du Laos." Comptes Rendus de l'Academie de Sciences - Serie IIa: Sciences de la Terre et des Planetes. 329 (1999): 609-616. Abstract
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Coufal, DE, P. Tavares, AS Pereira, BH Hyunh, and SJ Lippard. "Reactions of nitric oxide with the reduced non-heme diiron center of the soluble methane monooxygenase hydroxylase." Biochemistry. 38 (1999): 4504-4513. AbstractWebsite

The soluble methane monooxygenase system from Methylococcus capsulatus (Bath) catalyzes the oxidation of methane to methanol and water utilizing dioxygen at a non-heme, carboxylate-bridged diiron center housed in the hydroxylase (H) component. To probe the nature of the reductive activation of dioxygen in this system, reactions of an analogous molecule, nitric oxide, with the diiron(II) form of the enzyme (H-red) Were investigated by both continuous and discontinuous kinetics methodologies using optical, EPR, and Mossbauer spectroscopy. Reaction of NO with H-red affords a dinitrosyl species, designated H-dinitrosyl, with optical spectra (lambda(max) = 450 and 620 nm) and Mossbauer parameters (delta = 0.72 mm/s, Delta E-Q = 1.55 mm/s) similar to those of synthetic dinitrosyl analogues and of the dinitrosyl adduct of the reduced ribonucleotide reductase R2 (RNR-R2) protein. The H-dinitrosyl species models features of the H-peroxo intermediate formed in the analogous dioxygen reaction. In the presence of protein B, H-dinitrosyl builds up with approximately the same rate constant as H-peroxo (similar to 26 s(-1)) at 4 degrees C. In the absence of protein B, the kinetics of H-dinitrosyl formation were best fit with a biphasic A –> B –> C model, indicating the presence of an intermediate species between H-red and H-dinitrosyl. This result contrasts with the reaction of H-red with dioxygen, in which the H-peroxo intermediate forms in measurable quantities only in the presence of protein B. These findings suggest that protein B may alter the positioning but not the availability of coordination sites on iron for exogenous ligand binding and reactivity.

Wengenack, N., H. Lopes, M. Kennedy, P. Tavares, AS Pereira, I. Moura, JJG Moura, and F. Rusnak. "Redox potential of the heme protein KatG from Mycobacterium tuberculosis." Journal of Inorganic Biochemistry. 74 (1999): 336. AbstractWebsite
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Santos, J. P., J. P. Marques, F. Parente, E. Lindroth, P. Indelicato, and J. P. Desclaux. "Relativistic 2s1/2 (L1) atomic subshell decay rates and fluorescence yields for Yb and Hg." Journal of Physics B: Atomic and Molecular Physics. 32 (1999): 2089. AbstractWebsite
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Santos, J. P., F. Mota-Furtado, M. F. Laranjeira, and F. Parente. "Rydberg states of atoms in parallel electric and magnetic fields." Physical Review A. 59 (1999): 1703-1706. AbstractWebsite

We present theoretical results for the photoabsorption spectrum of an atom in parallel electric and magnetic fields, using the R-matrix method combined with quantum-defect theory. We introduce a radial basis set which is complete and orthonormal over a semi-infinite interval [r0,(infinity)), to allow calculations to be performed for high Rydberg states in nonhydrogenic atoms without encountering problems due to linear dependence of the basis set. The nonhydrogenic character of the spectra is analyzed for Li and Rb, and a comparison is made with previous high-precision experiments which shows that the theoretical results agree very well with experiment.

Paulino, Hervé, Fernando Silva, and Luís Lopes. "Um Modelo de Programação Paralela Simples para Arquitecturas Distribuídas de Baixo-Custo." Proceedings of the 11th Symposium on Computer Architecture and High Performance Computing (SBAC-PAD'99). Eds. Philippe O. A. Navaux, Tiarajú A. Diverio, and Cláudio R. Geyer. 1999. 121-126. Abstract
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Paulino, Hervé, Fernando Silva, and Luís Lopes Um Modelo de Programação Paralela Simples para Arquitecturas Distribuíidas de Baixo-Custo. http://www.dcc.fc.up.pt/Pubs/treports.html: DCC - FC & LIACC, Universidade do Porto, 1999. Abstract
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Allain, R., P. Taquet, B. Battail, J. Dejax, P. Richir, M. Véran, F. Limon-Duparcmeur, and et al. "Un nouveau genre de dinosaure sauropode de la formation des Grès supérieurs (Aptien-Albien) du Laos." Comptes Rendus de l'Académie des Sciences-Series IIA-Earth and Planetary Science. 329 (1999): 609-616. Abstract
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Coufal, DE, P. Tavares, AS Pereira, BH Hyunh, and SJ Lippard. "{Reactions of nitric oxide with the reduced non-heme diiron center of the soluble methane monooxygenase hydroxylase}." Biochemistry. 38 (1999): 4504-4513. Abstract
The soluble methane monooxygenase system from Methylococcus capsulatus (Bath) catalyzes the oxidation of methane to methanol and water utilizing dioxygen at a non-heme, carboxylate-bridged diiron center housed in the hydroxylase (H) component. To probe the nature of the reductive activation of dioxygen in this system, reactions of an analogous molecule, nitric oxide, with the diiron(II) form of the enzyme (H-red) Were investigated by both continuous and discontinuous kinetics methodologies using optical, EPR, and Mossbauer spectroscopy. Reaction of NO with H-red affords a dinitrosyl species, designated H-dinitrosyl, with optical spectra (lambda(max) = 450 and 620 nm) and Mossbauer parameters (delta = 0.72 mm/s, Delta E-Q = 1.55 mm/s) similar to those of synthetic dinitrosyl analogues and of the dinitrosyl adduct of the reduced ribonucleotide reductase R2 (RNR-R2) protein. The H-dinitrosyl species models features of the H-peroxo intermediate formed in the analogous dioxygen reaction. In the presence of protein B, H-dinitrosyl builds up with approximately the same rate constant as H-peroxo (similar to 26 s(-1)) at 4 degrees C. In the absence of protein B, the kinetics of H-dinitrosyl formation were best fit with a biphasic A –> B –> C model, indicating the presence of an intermediate species between H-red and H-dinitrosyl. This result contrasts with the reaction of H-red with dioxygen, in which the H-peroxo intermediate forms in measurable quantities only in the presence of protein B. These findings suggest that protein B may alter the positioning but not the availability of coordination sites on iron for exogenous ligand binding and reactivity.
Wengenack, N., H. Lopes, M. Kennedy, P. Tavares, AS Pereira, I. Moura, JJG Moura, and F. Rusnak. "{Redox potential of the heme protein KatG from Mycobacterium tuberculosis}." Journal Of Inorganic Biochemistry. 74 (1999): 336.
Leitão, Carlos M. M., Teresa Almeida, Gregoire Bonfait, O. M. N. D. Teodoro, and A. M. C. Moutinho. "{UHV sample holder for fast heating and cooling cycles}." Vaccum. 52 (1999): 23-26. Abstract

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1998
Volsky, S., Elena Lomonova, Ben J. Klaassens, and Stanimir Valtchev. "A Basic Computer?Aided Course on Dynamic Processes in Mechatronic Systems for Aeronautical Engineers." 9th Annual Conference of the European Association for Education in Electrical and Information Engineering (EAEEIE). 1998. 293-298.
Cunha, José C., and João Louren{\c c}o. "An integrated course on parallel and distributed processing." SIGCSE Bull.. 30 (1998): 217-221. AbstractWebsite
Most known teaching experiences focus on parallel computing courses only, but some teaching experiences on distributed computing courses have also been reported. In this paper we describe a course on Parallel and Distributed Processing that is taught at undergraduate level in the Computer Science degree of our University.This course presents an integrated approach concerning concurrency, parallelism, and distribution issues. It’s a breadth-first course addressing a wide spectrum of abstractions: the theoretical component focus on the fundamental abstractions to model concurrent systems, including process cooperation schemes, concurrent programming models, data and control distribution, concurrency control and recovery in transactional systems, and parallel processing models; the practical component illustrates the design and implementation issues involved in selected topics such as a data and control distribution problem, a distributed transaction-based support system and a parallel algorithm.We also discuss how this approach has been contributing to prepare the student to further actions regarding research and development of concurrent, distributed, or parallel systems.
Leite, {João Alexandre Carvalho Pinheiro}, and {José Júlio Alves} Alferes. "Dynamic Logic Programming." Declarative Programming. 1998. 393-408. Abstract
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Leite, {João Alexandre Carvalho Pinheiro}, and {José Júlio Alves} Alferes. "Dynamic Logic Programming." Representation and Reasoning. Morgan Kaufmann, 1998. 98-109. Abstract
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Paulino, Hervé, Fernando Silva, and Luís Lopes. "di_pSystem: Um Ambiente de Programação Paralela para Arquitecturas de Memória Distribuída." Actas da Primeira Conferência sobre Redes de Computadores (CRC'98). Coimbra, Portugal 1998. 143-148. Abstract

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