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2015
Tolstogouzov, A. B., S. F. Belykh, V. S. Gurov, A. A. Lozovan, A. I. Taganov, O. M. N. D. Teodoro, A. A. Trubitsyn, and S. P. Chenakin. "Ion Beam Sources Based on Room Temperature Ionic Liquids for Aerospace Applications , Nanotechnology , and Microprobe Analysis ( Review )." Instruments and Experimental Techniques. 58.1 (2015): 1-14.2014_review_ion_beam_sources.pdf
Grácio, Bruno, João Costa Seco, and Hugo Lourenço Linguagem de manipulação de dados para NoSQL. INForum 2015 - Actas do 7º Simpósio de Informática. Covilhã, 2015.
Pinho, Fernando F. S., and Paulo B. Lourenço. "Paredes." Caderno de síntese tecnológica. Reabilitação de edifícios. ISBN 978-989-20-6183-2. Lisboa: Plataforma Tecnológica Portuguesa da Construção, 2015. 47.
Sousa, D. G., R. J. Dias, C. Ferreira, and J. M. Lourenço. "Preventing Atomicity Violations with Contracts." ArXiv e-prints (2015). Abstract1505.02951v1-dsousa.pdfWebsite

Software developers are expected to protect concurrent accesses to shared regions of memory with some mutual exclusion primitive that ensures atomicity properties to a sequence of program statements. This approach prevents data races but may fail to provide all necessary correctness properties.The composition of correlated atomic operations without further synchronization may cause atomicity violations. Atomic violations may be avoided by grouping the correlated atomic regions in a single larger atomic scope. Concurrent programs are particularly prone to atomicity violations when they use services provided by third party packages or modules, since the programmer may fail to identify which services are correlated. In this paper we propose to use contracts for concurrency, where the developer of a module writes a set of contract terms that specify which methods are correlated and must be executed in the same atomic scope. These contracts are then used to verify the correctness of the main program with respect to the usage of the module(s). If a contract is well defined and complete, and the main program respects it, then the program is safe from atomicity violations with respect to that module. We also propose a static analysis based methodology to verify contracts for concurrency that we applied to some real-world software packages. The bug we found in Tomcat 6.0 was immediately acknowledged and corrected by its development team.

Coelho, Helena, T. Matsushita, G. Artigas, H. Hinou, FJ Cañada, R. Lo-Man, C. Leclerc, E. J. Cabrita, J. Jiménez-Barbero, S. - I. Nishimura, F. Garcia-Martín, and F. Marcelo. "The Quest for Anticancer Vaccines: Deciphering the Fine-Epitope Specificity of Cancer-Related Monoclonal Antibodies by Combining Microarray Screening and Saturation Transfer Difference NMR." J. Am. Chem. Soc.. 137 (2015): 12438-12441.
Aquino, Aline S., FL Bernard, JV Borges, Luis Mafra, Felipe Dalla Vecchia, MO Vieira, R. Ligabue, VV Chaban, E. J. Cabrita, and S. Einloft. "Rationalizing the role of the anion in CO2 capture and conversion using imidazolium-based ionic liquid modified mesoporous sílica." RSC Advances. 5 (2015): 64220-64227.
Pinho, Fernando F. S., Válter J. G. Lúcio, and Manuel F. C. BAIÃO. "Rubble Stone Masonry Walls Strengthened By Three-dimensional Steel Ties and Textile Reinforced Mortar Render, under Compression and Shear Loads." International Journal of Architectural Heritage: Conservation, Analysis, and Restoration. 9. 844-858.DOI: 10.1080/15583058.2013.878413 (2015).
de Melo, J. L. A., P. V. Leitão, J. Goes, and N. Paulino A simple class-D audio power amplifier using a passive CT ΣΔ modulator for medium quality sound systems. 22nd International Conference Mixed Design of Integrated Circuits & Systems (MIXDES’15). Torun, Poland: IEEE, 2015.
Silva, João André, Tiago Vale, Ricardo Dias, Hervé Paulino, and João M. Lourenço Supporting Multiple Data Replication Models in Distributed Transactional Memory. ICDCN 2015. Goa, India: ACM, 2015. Abstract

Distributed transactional memory (DTM) presents itself as a highly expressive and programmer friendly model for con- currency control in distributed programming. Current DTM systems make use of both data distribution and replication as a way of providing scalability and fault tolerance, but both techniques have advantages and drawbacks. As such, each one is suitable for different target applications, and deployment environments. In this paper we address the support of different data replication models in DTM. To that end we propose ReDstm, a modular and non-intrusive framework for DTM, that supports multiple data replication models in a general purpose programming language (Java). We show its application in the implementation of distributed software transactional memories with different replication models, and evaluate the framework via a set of well-known benchmarks, analysing the impact of the different replication models on memory usage and transaction throughput.

Silva, João A., Tiago M. Vale, Ricardo J. Dias, Hervé Paulino, and João M. Lourenço. "Supporting Multiple Data Replication Models in Distributed Transactional Memory." Proceedings of the 2015 International Conference on Distributed Computing and Networking. ICDCN '15. Goa, India: ACM, 2015. 11:1-11:10. Abstracticdcn15-jsilva.pdf

Distributed transactional memory (DTM) presents itself as a highly expressive and programmer friendly model for concurrency control in distributed programming. Current DTM systems make use of both data distribution and replication as a way of providing scalability and fault tolerance, but both techniques have advantages and drawbacks. As such, each one is suitable for different target applications, and deployment environments. In this paper we address the support of different data replication models in DTM. To that end we propose ReDstm, a modular and non-intrusive framework for DTM, that supports multiple data replication models in a general purpose programming language (Java). We show its application in the implementation of distributed software transactional memories with different replication models, and evaluate the framework via a set of well-known benchmarks, analysing the impact of the different replication models on memory usage and transaction throughput.

Gonçalves, L., Z. Santos, Miguel Amado, I. Craveiro, J. Cabral, Lapão L.V., A. P. Delgado, A. Correia, D. Alves, and R. Simões. "Urban Planning and Health Inequities: looking in a small-scale in a City of Cape Verde." PLOSone. 23/11/2015.DOI: 10.1371/journal.pone.0142955 (2015).
Povoa, R., N. Lourenco, N. Horta, and J. Goes A voltage-combiners-biased amplifier with enhanced gain and speed using current starving. IEEE International Symposium on Circuits and Systems (ISCAS’15). Lisbon, Portugal: IEEE, 2015.
Silva, Tiago A. N., M. A. R. Loja, A. Carvalho, Nuno M. M. Maia, and J. I. Barbosa Adaptive Empirical Distributions in the Framework of Inverse Problems (submitted). International Journal of Computational Methods in Engineering Science and Mechanics., 2015. Abstract
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Young, M. T., S. Hua, L. Steel, D. Foffa, S. L. Brusatte, S. Thüring, O. Mateus, J. I. Ruiz-Omeñaca, P. Havlik, Y. Lepage, and M. B. De Andrade. "Addendum to ?Revision of the Late Jurassic teleosaurid genus Machimosaurus (Crocodylomorpha, Thalattosuchia)?" Royal Society Open Science. 2 (2015). Abstract
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Mendes, Manuel J., Seweryn Morawiec, Tiago Mateus, Andriy Lyubchyk, Hugo Águas, Isabel Ferreira, Elvira Fortunato, Rodrigo Martins, Francesco Priolo, and Isodiana Crupi. "Broadband light trapping in thin film solar cells with self-organized plasmonic nano-colloids." Nanotechnology. 26 (2015): 135202. Abstract
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Soares, R. S., R. C. C. Monteiro, M. M. R. A. Lima, and R. J. C. Silva. "Crystallization of lithium disilicate-based multicomponent glasses–effect of silica/lithia ratio." Ceramics International. 41 (2015): 317-324. Abstract
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Figueiredo, Elin, Beatriz Comendador Rey, João Fonte, Emmanuelle Meunier, Aaron Lackinger, Rui JC Silva, João Pedro Veiga, Carlo Bottaini, José Mirão, and Alexandre Lima. "Estanho antigo no Noroeste Peninsular: uma abordagem multidisciplinar e transfronteiriça para o estabelecimento de uma visão integrada." XI Congresso Ibérico de Arqueometria. 2015. Abstract
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Silva, F., M. de Moura, N. Dourado, J. Xavier, F. Pereira, J. Morais, M. Dias, P. Lourenço, and F. Judas. "Fracture Characterization of Human Cortical Bone Under Mode I Loading." Journal of Biomechanical Engineering. 137 (2015): 121004. AbstractWebsite

A miniaturized version of the double cantilever beam (DCB) test is used to determine the fracture energy in human cortical bone under pure mode I loading. An equivalent crack length based data-reduction scheme is used with remarkable advantages relative to classical methods. Digital image correlation (DIC) technique is employed to determine crack opening displacement at the crack tip being correlated with the evolution of fracture energy. A method is presented to obtain the cohesive law (trapezoidal bilinear softening) mimicking the mechanical behavior observed in bone. Cohesive zone modeling (CZM) (finite-element method) was performed to validate the procedure showing excellent agreement.

Silva, T. A. N., M. A. R. Loja, A. Carvalho, N. M. M. Maia, and J. I. Barbosa A global optimization approach based on adaptive populations. 2nd ECCOMAS Thematic International Conference on Numerical and Symbolic Computation: Developments and Applications (SYMCOMP 2015). Faro, Portugal, 2015. Abstract
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Freire, D. M., M. G. Rivas, A. M. Dias, A. T. Lopes, C. Costa, T. Santos-Silva, S. Van Doorslaer, and P. J. González. "The homopentameric chlorite dismutase from Magnetospirillum sp." Journal of Inorganic Biochemistry. 151 (2015): 1-9. Abstract
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Silva, Tiago, Maria Loja, Nuno M. M. Maia, and Joaquim Barbosa A hybrid procedure to identify the optimal stiffness coefficients of elastically restrained beams. Vol. 25. International Journal of Applied Mathematics and Computer Science, 25.2., 2015. Abstract

The formulation of a bending vibration problem of an elastically restrained Bernoulli-Euler beam carrying a finite number of concentrated elements along its length is presented. In this study, the authors exploit the application of the differential evolution optimization technique to identify the torsional stiffness properties of the elastic supports of a Bernoulli-Euler beam. This hybrid strategy allows the determination of the natural frequencies and mode shapes of continuous beams, taking into account the effect of attached concentrated masses and rotational inertias, followed by a reconciliation step between the theoretical model results and the experimental ones. The proposed optimal identification of the elastic support parameters is computationally demanding if the exact eigenproblem solving is considered. Hence, the use of a Gaussian process regression as a meta-model is addressed. An experimental application is used in order to assess the accuracy of the estimated parameters throughout the comparison of the experimentally obtained natural frequency, from impact tests, and the correspondent computed eigenfrequency.

Silva, Lisete, Robert A. Childs, Angelina S. Palma, Wengang Chai, Ten Feizi, and Yan Liu. "Influence of carrier lipid composition on glycan recognition in NGL-based microarrays." Glycobiology. 25 (2015): 1260. Abstract
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Liu, G.a, Liu Zhu Shin Fortunato Martins Wang Shan A. a H. a. "Low-Temperature, Nontoxic Water-Induced Metal-Oxide Thin Films and Their Application in Thin-Film Transistors." Advanced Functional Materials (2015). AbstractWebsite

Here, a simple, nontoxic, and inexpensive "water-inducement" technique for the fabrication of oxide thin films at low annealing temperatures is reported. For water-induced (WI) precursor solution, the solvent is composed of water without additional organic additives and catalysts. The thermogravimetric analysis indicates that the annealing temperature can be lowered by prolonging the annealing time. A systematic study is carried out to reveal the annealing condition dependence on the performance of the thin-film transistors (TFTs). The WI indium-zinc oxide (IZO) TFT integrated on SiO2 dielectric, annealed at 300 °C for 2 h, exhibits a saturation mobility of 3.35 cm2 V-1 s-1 and an on-to-off current ratio of ≈108. Interestingly, through prolonging the annealing time to 4 h, the electrical parameters of IZO TFTs annealed at 230 °C are comparable with the TFTs annealed at 300 °C. Finally, fully WI IZO TFT based on YOx dielectric is integrated and investigated. This TFT device can be regarded as "green electronics" in a true sense, because no organic-related additives are used during the whole device fabrication process. The as-fabricated IZO/YOx TFT exhibits excellent electron transport characteristics with low operating voltage (≈1.5 V), small subthreshold swing voltage of 65 mV dec-1 and the mobility in excess of 25 cm2 V-1 s-1. © 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Lyubchyk, A.a, Filonovich Mateus Mendes Vicente Leitão Falcão Fortunato Águas Martins S. A. a T. "Nanocrystalline thin film silicon solar cells: A deeper look into p/i interface formation." Thin Solid Films. 591 (2015): 25-31. AbstractWebsite

The p/i interface plays a major role in the conversion efficiency of nanocrystalline silicon (nc-Si:H) solar cells. Under plasma-enhanced chemical vapor deposition (PECVD) of the intrinsic (i) nc-Si:H layer, ion bombardment can severely affect the underlying p-doped layer and degrade the solar cell performance. The core of the present work is to investigate the effect of light and heavy ion bombardment on the structural modifications of the p-layer during the p/i interface formation. The properties of the nc-Si:H materials deposited under distinct conditions are analyzed and correlated to the deposition rate and the resulting cell efficiency. To recreate the ion bombardment during the initial stages of the i-layer deposition on the p-layer, hydrogen plasma treatment was performed for 30 s (light ion bombardment), after which a flux of silane was introduced into the deposition chamber in order to initiate the heavy ion bombardment and growth of an ultra-thin (5 nm) i-layer. The structural changes of the p-type nc-Si:H layers were observed by spectroscopic ellipsometry. The obtained results confirm that detrimental structural modifications (e.g. partial amorphization of the sub-surface region and bulk) occur in the p-layer, caused by the ion bombardment. To minimize this effect, a protective buffer layer is investigated able to improve the performance of the solar cells fabricated under increased growth rate conditions. © 2015 Elsevier B.V. All rights reserved.

Lyubchyk, Andriy, Sergej Alexandrovich Filonovich, Tiago Mateus, Manuel João Mendes, António Vicente, Joaquim Pratas Leitão, Bruno Poças Falcão, Elvira Fortunato, Hugo Águas, and Rodrigo Martins. "Nanocrystalline thin film silicon solar cells: A deeper look into p/i interface formation." Thin Solid Films. 591 (2015): 25-31. Abstract
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