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2011
Amado, M. P., and M. R. Ribeiro Urban Sprawl promoted through Master Planning. World Congress of Sustainable Building. Helsinki, Finland: SB11, 2011.
R. Ramos, J. Castro, J. Araújo, and F. Alencar. "A Use Case Package Refactoring: Dealing with the Large, Scattering or Tangling Use Case Model Problems." VIII Latin American Conference on Pattern Languages of Programming - SugarLoafPlop. Springer-Verlag, 2011. Abstract

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S. Zschaler, P. Sanchez, J. Santos, Mauricio Alferez, A. Moreira, J. Araújo, U. Kulesza, and L. Fuentes. "Variability Management." Cambridge University press, 2011. Abstract

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Martinho, Bruno, and Márcia Vilarigues Vitrais e Vidros, um gosto de D. Fernando II / Stained Glass and Glass Objects, Ferdinand II’s passion. Sintra: Parques de Sintra, Monte da Lua , S.A., 2011.
Afonso, Marcos, Pedro Pereira, and João Martins. "Weather Monitoring System for Renewable Energy Power Production Correlation." Doctoral Conference on Computing, Electrical and Industrial Systems, DoCEIS 2011. Ed. Luis Camarinha-Matos. Vol. 349. IFIP Advances in Information and Communication Technology, 349. Costa de Caparica - Portugal: Springer Boston, 2011. 481-490. Abstract

This work describes the development of a system designed for renewable power generation integration. It continuously acquires wind, solar and temperature data, which is automatically correlated with energy parameters, obtained from renewable energy systems. The developed system was installed in an urban building equipped with photovoltaic cells and wind renewable generation. To validate the developed application, it was analyzed data of a wind generator and a set of photovoltaic panels, installed near to the weather station. The developed application allows, in addition to the acquisition of weather and energy data, their continuous monitoring and correlation through a graphical user interface, providing a friendly interactivity with the user.

Teodoro, Orlando M. N. D., and Ana Cristina Mesquita. "{Gas Released From Cork After Bottling}." Bulletin de l'OIV. 84 (2011): 361-369. Abstract2011_gas_released_from_cork_oiv.pdfWebsite

The evolution of wine after bottling may be affected by the continuous supply of oxygen through the closures. I n the case of cork, oxygen may come from two different sources: permeation from outside through the cork and the release of gas from inside cork cells. I n this work we studied this later issue. The typical compression rate (volume change / uncompressed volume) of a cork stopper is about 40%. Taking in account that cork has a void volume ranging 70 to 80°/o cork cells pressure after bottling may reach 2 atm. This pressurized gas will 'escape' to both sides of the closure along many weeks. I n this work we measured the gas flow coming from cork stoppers in 3 typical starting headspace pressures: 60 mbar, 1000 mbar and 3000 mbar (absolute pressures). These conditions correspond roughly to vacuum bottling, balanced pressures bottling and bottling without any prior pumping. These experiments were performed by continuous monitoring the pressure, with a high accuracy gauge, in the headspace along several weeks keeping the bottleneck volume at constant temperature. In the case of vacuum bottling the headspace pressure continuously rises for many weeks. With balanced pressures, the pressure rises for a few days and then starts decreasing. I n the case of bottling without pumping the headspace pressure is typically higher than the cork cells pressure leading to a continuous pressure loss. These results together with those from permeation of cork provide a useful picture to those who need to know quantitavely the amount of oxygen in contact with wine in the post bottling period. (Bulletin de I'OIV, 2011, vol. 84, n0965-966-967, p. 261-269)

Folgosa, Filipe, Cristina M. Cordas, Joana A. Santos, Alice S. Pereira, Jose J. G. Moura, Pedro António Brito Tavares, and Isabel Moura. "{New spectroscopic and electrochemical insights on a class I superoxide reductase: Evidence for an intramolecular electron transfer pathway.}." Biochemical Journal (2011). Abstract
Superoxide reductases are enzymes involved in bacterial resistance to reactive oxygen species, catalyzing the reduction of superoxide anions to hydrogen peroxide. So far three structural classes have been identified. Class I enzymes have two iron-center containing domains. Most studies have been focused on the catalytic iron site (center II), but the role of center I is yet poorly understood. The possible roles of this iron site were approached by an integrated study using both classical and fast kinetics measurements as well as direct electrochemistry. A new heterometallic form of the protein with a zinc-substituted center I, maintaining the iron active site center II was obtained, resulting in a stable derivative useful for comparison with the native all-iron from. Second order rate constants for the electron transfer between reduced rubredoxin and the different SOR forms were determined to be 2.8x107 (M-1s-1) and 1.3x106 (M-1s-1) for SORFe(IIII)-Fe(II) and for SORFe(IIII)-Fe(III) forms respectively, and 3.2x106 (M-1s-1) for the SORZn(II)-Fe(III) form. The results obtained seem to indicate that center I transfers electrons from the putative physiologic donor, rubredoxin, to the catalytic active iron site (intramolecular process). In addition, electrochemical results show that conformational changes are associated to the redox state of center I, which may enable a faster catalytic response towards superoxide anion. The apparent rate constants calculated for the SOR-mediated electron transfer also support this observation.
Faria, David P., Ana L. Fonseca, Helen Pereira, and Orlando M. N. D. Teodoro. "{Permeability of cork to gases}." Journal of agricultural and food chemistry. 59 (2011): 3590-3597. Abstract2011_permeability_of_cork.pdfWebsite

The permeability of gases through uncompressed cork was investigated. More than 100 samples were assessed from different plank qualities to provide a picture of the permeability distribution. A novel technique based on a mass spectrometer leak detector was used to directly measure the helium flow through the central area of small disks 10 mm in diameter and 2 mm thick. The permeability for nitrogen, oxygen, and other gases was measured by the pressure rise technique. Boiled and nonboiled cork samples from different sections were evaluated. An asymmetric frequency distribution ranging 3 orders of magnitude (roughly from 1 to 1000 $μ$mol/(cm·atm·day)) for selected samples without macroscopic defects was found, having a peak below 100 $μ$mol/(cm·atm·day). Correlation was found between density and permeability: higher density samples tend to show lower permeability. However, boiled cork showed a mean lower permeability despite having a lower density. The transport mechanism of gases through cork was also examined. Calculations suggest that gases permeate uncompressed cork mainly through small channels between cells under a molecular flow regime. The diameter of such channels was estimated to be in the range of 100 nm, in agreement with the plasmodesmata size in the cork cell walls.

Casaleiro, J., H. Lopes, L. B. Oliveira, J. R. Fernandes, and M. M. Silva. "A 1 mW low phase-noise relaxation oscillator." Circuits and Systems (ISCAS), 2011 IEEE International Symposium on. IEEE, 2011. 1133-1136. Abstract
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Valtchev, Stanimir. "Actions for Broadening the Engineering Culture of the European Student with an Insight to the Future Needs of the Global (European) Labour Market." First Conference with International Participation {"}Education, Science, Innovations{"}, Pernik, Proceedings of ESIʹ2011, pp. 78-82. 2011. Abstract
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"Actions for Broadening the Engineering Culture of the European Student with an Insight to the Future Needs of the Global (European) Labour Market." First Conference with International Participation "Education, Science, Innovations", Pernik, Proceedings of ESIʹ2011, pp. 78-82. 2011. Abstract
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Palma, L., and P. Gil. "Adaptive and Robust Monitoring Approach for WSAN Environments." IEEE 9th International Conference on Industrial Informatics. n/a 2011. Abstract
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Gil, P., G. N. N. V. Nunes, L. Palma, A. Santos, and Alberto Cardoso. "Adaptive Model Based Predictive Networked Control over WSAN with Tolerance to Transmission Faults on the Forward Channel." 5th International Conference on Sensing Technology (ICST 2011). n/a 2011. Abstract
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Borges, J. P., M. H. Godinho, J. L. Figueirinhas, M. N. de Pinho, and M. N. Belgacem. "All-cellulosic based composites." Cellulose Fibers: Bio-and Nano-Polymer Composites. Springer Berlin Heidelberg, 2011. 399-421. Abstract
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Alves, M., S. Moes, P. Jenoe, C. Pinheiro, J. Passarinho, and C. P. Ricardo. "The analysis of Lupinus albus root proteome revealed cytoskeleton altered features due to long-term boron deficiency." Journal of Proteomics. 74 (2011): 1351-1363. AbstractWebsite
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Alves, M., S. Moes, P. Jenoe, C. Pinheiro, J. Passarinho, and C. P. Ricardo. "The analysis of Lupinus albus root proteome revealed cytoskeleton altered features due to long-term boron deficiency." Journal of Proteomics. 74 (2011): 1351-1363. AbstractWebsite
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Mateus, Octávio, Louis L. Jacobs, Anne S. Schulp, Michael J. Polcyn, Tatiana S. Tavares, André Buta Neto, Maria Lu{\'ı}sa Morais, and Miguel T. Antunes. "Angolatitan adamastor, a new sauropod dinosaur and the first record from Angola." Anais da Academia Brasileira de Ciências. 83 (2011): 221-233. AbstractWebsite
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Mateus, Octávio, Octávio Mateus, Louis L. Jacobs, Anne S. Schulp, Michael J. Polcyn, Tatiana S. Tavares, André Buta Neto, Maria Luísa Morais, and Miguel T. Antunes. "Angolatitan adamastor, a new sauropod dinosaur and the first record from Angola." Anais da Academia Brasileira de Ciências (2011). Abstract
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Gomes, H. L., P. R. F. Rocha, A. Kiazadeh, D. M. \{De Leeuw\}, and S. C. J. Meskers. "Anomalous temperature dependence of the current in a metal-oxide-polymer resistive switching diode." Journal Of Physics D-Applied Physics. 44 (2011). Abstract

Metal-oxide polymer diodes exhibit non-volatile resistive switching. The current-voltage characteristics have been studied as a function of temperature. The low-conductance state follows a thermally activated behaviour. The high-conductance state shows a multistep-like behaviour and below 300K an enormous positive temperature coefficient. This anomalous behaviour contradicts the widely held view that switching is due to filaments that are formed reversibly by the diffusion of metal atoms. Instead, these findings together with small-signal impedance measurements indicate that creation and annihilation of filaments is controlled by filling of shallow traps localized in the oxide or at the oxide/polymer interface. © 2011 IOP Publishing Ltd.

Araújo, João, Vítor H. Fernandes, Manuel M. Jesus, Victor Maltcev, and James D. Mitchell. "Automorphisms of partial endomorphism semigroups." Publ. Math. Debrecen. 79 (2011): 23-39. AbstractWebsite
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Martins, R., B. Brás, I. Ferreira, L. Pereira, P. Barquinha, N. Correia, R. Costa, T. Busani, A. Gonçalves, and A. Pimentel Away from silicon era: the paper electronics. SPIE OPTO. International Society for Optics and Photonics, 2011. Abstract
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Martins, R., B. Bras, I. Ferreira, L. Pereira, P. Barquinha, N. Correia, R. Costa, T. Busani, A. Goncalves, A. Pimentel, and E. Fortunato. "Away from silicon era: the paper electronics." Oxide-Based Materials and Devices Ii. Eds. F. H. Teherani, D. C. Look, and D. J. Rogers. Vol. 7940. Proceedings of SPIE, 7940. 2011. Abstract
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Martins, R., Brás Ferreira Pereira Barquinha Correia Costa Busani Gonçalves Pimentel Fortunato B. I. L. "Away from silicon era: The paper electronics." Proceedings of SPIE - The International Society for Optical Engineering. Vol. 7940. 2011. Abstract

Today there is a strong interest in the scientific and industrial community concerning the use of biopolymers for electronic applications, mainly driven by low-cost and disposable applications. Adding to this interest, we must recognize the importance of the wireless auto sustained and low energy consumption electronics dream. This dream can be fulfilled by cellulose paper, the lightest and the cheapest known substrate material, as well as the Earth's major biopolymer and of tremendous global economic importance. The recent developments of oxide thin film transistors and in particular the production of paper transistors at room temperature had contributed, as a first step, for the development of disposable, low cost and flexible electronic devices. To fulfil the wireless demand, it is necessary to prove the concept of self powered devices. In the case of paper electronics, this implies demonstrating the idea of self regenerated thin film paper batteries and its integration with other electronic components. Here we demonstrate this possibility by actuating the gate of paper transistors by paper batteries. We found that when a sheet of cellulose paper is covered in both faces with thin layers of opposite electrochemical potential materials, a voltage appears between both electrodes - paper battery, which is also self-regenerated. The value of the potential depends upon the materials used for anode and cathode. An open circuit voltage of 0.5V and a short-circuit current density of 1μA/cm2 were obtained in the simplest structure produced (Cu/paper/Al). For actuating the gate of the paper transistor, seven paper batteries were integrated in the same substrate in series, supplying a voltage of 3.4V. This allows proper ON/OFF control of the paper transistor. Apart from that transparent conductive oxides can be also used as cathode/anode materials allowing so the production of thin film batteries with transparent electrodes compatible with flexible, invisible, self powered and wireless electronics. © 2011 SPIE.

Feizi, Ten, Yan Liu, and Angelina S. Palma. "Bacterial, Fungal, and Algal Lectins: Combatants in Tug of War against HIV." Structure. 19 (2011): 1035-1037. Abstract
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Fernandes, Vítor H., and Teresa M. Quinteiro. "Bilateral semidirect product decompositions of transformation monoids." Semigroup Forum. 82 (2011): 271-287. Abstract
Summary: In this paper we consider the monoid $\mathcal {OR}_{n}$ of all full transformations on a chain with $n$ elements that preserve or reverse the orientation, as well as its submonoids $\mathcal {OD}_{n}$ of all order-preserving or order-reversing elements, $\mathcal {OP}_{n}$ of all orientation-preserving elements and $\mathcal {O}_{n}$ of all order-preserving elements. By making use of some well known presentations, we show that each of these four monoids is a quotient of a bilateral semidirect product of two of its remarkable submonoids.