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2001
Ferreira, I., M. E. V. Costa, L. Pereira, E. Fortunato, R. Martins, A. R. Ramos, and M. F. Silva. "{Silicon carbide alloys produced by hot wire, hot wire plasma-assisted and plasma-enhanced CVD techniques}." Applied Surface Science. 184 (2001): 8-19. AbstractWebsite
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Montilla, F., T. Aviles, T. Casimiro, A. A. Ricardo, and M. N. da Ponte. "CPCO(CO)(2)-catalysed cyclotrimerisation of alkynes in supercritical carbon dioxide." J Organomet Chem. 632 (2001): 113-118. AbstractWebsite

The reactivity of mono-substituted HC=CR (R =Ph. a; CH2OH, b; CH2CH2CH2CH3, c) and di-substituted RC=CR (R = CH2CH3, d; CO2CH3, e; Ph. f) acetylenes was studied in supercritical carbon dioxide (scCO(2)) using the easily available complex CpCo(CO)(2) as catalyst. The reaction of phenylacetylene produced a mixture of the isomeric cyclotrimers 1,3,5- (2a) and 1.2,4-triphenylbenzene (2a '). in a 1:5 ratio, and traces of cobaltcyclopentadienone complexes CPCO(eta (4)-C4H2[Ph](2)CO) (6a, mixture of isomers). The possible product formed by the incorporation of CO, to alkynes, i.e. diphenylpyrone (7a) was not observed. The reaction of the cobaltacyclopentadiene complex CpCo(1.4-sigma -C-4[Ph](4))(PPh)(3) (8f), in scCO(2), was performed. No insertion of CO2 into the Co-C a-bond to form tetraphenylpyrone (7f) by reductive elimination was observed, instead the cobaItcyclobutadiene Complex CpCo(eta (4)-C-4[Ph](4)) (9f) was formed. In the reactions with other alkynes, lower yields were obtained in general, except in the cyclotrimerisation of the highly activated alkyne, propargyl alcohol (b). Reaction of the non-activated alkynes, 1-hexyne (c) and 3-hexyne (d), produced complex mixtures of cobalt complexes in low yield in which the alkyne was coordinated to cobalt. Finally, the highly hindered diphenylacetylene (f) gave a mixture of the known Complexes CpCo(eta (4)-C-4[Ph](4)) (9f) and CpCo(eta (4)- C-4[Ph](4)CO) (6f) in agreement with the results observed in conventional organic solvents. (C) 2001 Elsevier Science B.V, All rights reserved.

Di Rocco, G., AS Pereira, SA Bursakov, OY Gavel, F. Rusnak, J. Lampreia, JJG Moura, and I. Moura. "Cloning of a novel Mo-Cu containing protein from Desulfovibrio.gigas." JOURNAL OF INORGANIC BIOCHEMISTRY. 86 (2001): 202.
Goncalves, LML, C. Cunha, G. Almeida, S. Macieira, C. Costa, J. Lampreia, MJ Romao, JJG Moura, and I. Moura. "Structural studies on Desulfovibrio desulfuricans ATCC 27774 multiheme nitrite reductase - characterization of the subunits." JOURNAL OF INORGANIC BIOCHEMISTRY. 86 (2001): 316.
Montilla, F., E. Clara, T. Aviles, T. Casimiro, A. A. Ricardo, and M. N. da Ponte. "Transition-metal-mediated activation of arylisocyanates in supercritical carbon dioxide." J Organomet Chem. 626 (2001): 227-232. AbstractWebsite

The reactivity of arylisocyanates in supercritical carbon dioxide (scCO(2)) was studied using the easily available complexes CpCo(CO)(2), CpCoPPh3Me2 and Ni(cod)(2) as catalysts. A study of the solubility of the catalysts in scCO(2) was undertaken in all cases. The complex CpCo(CO)(2) is very soluble, 1.7 x 10(-1) mol kg(-1), while CpCoPPh3Me2 has a lower solubility, 7.2 x 10(-3) mol kg(-1), and Ni(cod)(2) is insoluble in scCO(2). For comparison purposes, the reactions were performed in parallel in scCO(2), using toluene as a solvent and just with the neat liquid arylisocyanate. Reactions in scCO(2) either do not take place at all, when CpCo(CO), is used as catalyst, or occur with low yields affording the trimer of the corresponding arylisocyanate when CpCoPPh3Me2 or Ni(cod)(2) act as catalysts. No incorporation of CO2 into the organic substrate was observed. Better conversions to triarylisocyanate were obtained when the reactions were performed by direct mixture of the liquid arylisocyanate ArNCO (Ar = Ph, p-CH3C6H4, p-CH3OC6H4) and the catalyst. Using toluene as a solvent, the yields of the trimers were lower than those obtained in neat arylisocyanate, and in some cases they were not formed at all. For instance in the reaction of CpCo(CO), and tolylisocyanate either under stoichiometric or catalytic conditions the trimer is not obtained, instead the compound H2R3N3C2O2 (R = CH3C6H4), was isolated in low yield. In the reaction of Ni(cod)(2)/PPh3 with phenylisocyanate, the trimer was formed but in low yield. The lower yields of the trimers observed when the reactions were performed in scCO(2) or in toluene, compared to that observed in neat arylisocyanates, indicates that the decrease in reactivity is due to a decrease in concentration. (C) 2001 Elsevier Science B.V. All rights reserved.

Ribeiro, N., A. Aguiar-Ricardo, A. Kordikowski, and M. Poliakoff. "Acoustic determination of the critical surface of {χ1CO2 + χ2C2H6 + (1 - χ1 - χ2)CHF3}." Physical Chemistry Chemical Physics. 3.6 (2001): 1027-1033. AbstractWebsite
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Montilla, F., T. Avilés, T. Casimiro, A. A. Ricardo, and M. Nunes Da Ponte. "CpCo(CO)2-catalysed cyclotrimerisation of alkynes in supercritical carbon dioxide." Journal of Organometallic Chemistry. 632.1-2 (2001): 113-118. AbstractWebsite
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Ribeiro, N., and A. Aguiar-Ricardo. "A simple acoustic probe for fluid phase equilibria: Application to the CO2 + N(C2H5)3 system." Fluid Phase Equilibria. 185.1-2 (2001): 295-303. AbstractWebsite
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Ribeiro, J. P., A. P. Jesus, B. Braizinha, J. Cruz, R. Mateus, and JV Pinto. "Experimental study of the F-19(p,alpha gamma)O-16 reaction." Nuclear Physics A. 688.1-2 (2001): 468C-471C. AbstractWebsite
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Almeida, PL, M. T. Cidade, M. H. Godinho, AC Ribeiro, and J. L. Figueirinhas. "Light scattering studies in cellulose derivative based PDLC type cells." 359.1 (2001): 79-88. Abstract
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Rybarczyk, Y., Galerne S., Hoppenot P., Colle E., and Mestre D. "The development of robot human-like behaviour for an efficient human-machine co-operation." 6th Conference of the Association for the Advancement of Assistive Technology in Europe. Ljubljana, Slovenia 2001. copy.pdf
Batista, AG, J. M. Rodrigues, and M. D. Ortigueira. "Time-Frequency and Time-Scale Characterisation of the Beat-by-Beat High-Resolution Electrocardiogram." Sixth Portuguese Conference on Biomedical Engineering Proceedings. 2001.
Pinheiro, C., M. M. Chaves, and C. P. Ricardo. "Alterations in carbon and nitrogen metabolism induced by water deficit in the stems and leaves of Lupinus albus L." Journal of Experimental Botany. 52 (2001): 1063-1070. AbstractWebsite
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Pinheiro, C., M. M. Chaves, and C. P. Ricardo. "Alterations in carbon and nitrogen metabolism induced by water deficit in the stems and leaves of Lupinus albus L." Journal of Experimental Botany. 52 (2001): 1063-1070. AbstractWebsite
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Di Rocco, G., AS Pereira, SA Bursakov, OY Gavel, F. Rusnak, J. Lampreia, JJG Moura, and I. Moura. "Cloning of a novel Mo-Cu containing protein from Desulfovibrio.gigas." Journal of Inorganic Biochemistry. 86 (2001): 202. AbstractWebsite
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de Ricqlès, A., O. Mateus, MT Antunes, and P. Taquet. "Histomorphogenesis of embryos of Upper Jurassic theropods from Lourinhã (Portugal)." Comptes Rendus de l'Académie des Sciences-Series IIA-Earth and Planetary Science. 332 (2001): 647-656. Abstract
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de Ricqlès, A., O. Mateus, MT Antunes, and P. Taquet. "Histomorphogenesis of embryos of Upper Jurassic theropods from Lourinhã (Portugal) | Histomorphogenèse du squelette d'embryons de dinosaures théropodes du Jurassique supérieur de Lourinhã (Portugal)." Comptes Rendus de l'Academie de Sciences - Serie IIa: Sciences de la Terre et des Planetes. 332 (2001): 647-656. Abstract
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Almeida, PL, M. T. Cidade, M. H. Godinho, AC Ribeiro, and J. L. Figueirinhas. "Light scattering studies in cellulose derivative based PDLC type cells." Molecular Crystals and Liquid Crystals. 359.1 (2001): 79-88. Abstract
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Figueiredo, MO, JP Veiga, TP Silva, P. B. Lourenço, and P. Roca. "Materials and reconstruction techniques at the aqueduct of Carthage since the Roman period." Historical constructions. Guimarães: Universidade do Minho (2001): 391-400. Abstract
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Araújo, Isabel M., Mário J. J. Branco, Vitor H. Fernandes, Gracinda M. S. Gomes, and N. Ruškuc. "On generators and relations for unions of semigroups." Semigroup Forum. 63 (2001): 49-62.
Carvalho, AL, JM Dias, L. Sanz, A. Romero, JJ Calvete, and MJ Romao. "Purification, crystallization and identification by X-ray analysis of a prostate kallikrein from horse seminal plasma." Acta Crystallographica Section D-Biological Crystallography. 57 (2001): 1180-1183. Abstract

The purification, crystallization and identification by X-ray diffraction analysis of a horse kallikrein is reported. The protein was purired from horse seminal plasma. Crystals belong to space group C2 and the structure was solved by the MIRAS method, with two heavy-atom derivatives of mercury and platinum. X-ray diffraction data to 1.42 Angstrom resolution were collected at the ESRF synchrotron-radiation source.

Baldwin, J., W. C. Voegtli, N. Khidekel, P. Moenne-Loccoz, C. Krebs, AS Pereira, B. A. Ley, BH HUYNH, T. M. Loehr, P. J. Riggs-Gelasco, A. C. Rosenzweig, and J. M. Bollinger. "Rational reprogramming of the R2 subunit of Escherichia coli ribonucleotide reductase into a self-hydroxylating monooxygenase." Journal of the American Chemical Society. 123 (2001): 7017-7030. AbstractWebsite

The outcome of O-2 activation at the diiron(II) cluster in the R2 subunit of Escherichia coli (class I) ribonucleotide reductase has been rationally altered from the normal tyrosyl radical (Y122)(1) production to self-hydroxylation of a phenylalanine side-chain by two amino acid substitutions that leave intact the (histidine)(2)-(carboxylate)(4) ligand set characteristic of the diiron-carboxylate family. Iron ligand Asp (D) 84 was replaced with Glu (E), the amino acid found in the cognate position of the structurally similar diiron-carboxylate protein, methane monooxygenase hydroxylase (MMOH). We previously showed that this substitution allows accumulation of a mu -1,2-peroxodiiron(III) intermediate,(2 3) which does not accumulate in the wild-type (wt) protein and is probably a structural homologue of intermediate P (H-peroxo) in O-2 activation by MMOH.(4) In addition, the near-surface residue Trp (W) 48 was replaced with Phe (F), blocking transfer of the "extra" electron that occurs in wt R2 during formation of the formally Fe(LII)Fe(IV) cluster X.(5-7) Decay of the mu1,2-peroxodiiron(III) complex in R2-W38F/D84E gives an initial brown product, which contains very little YI22(.) and which converts very slowly (t(1/2) similar to 7 h) upon incubation at 0 degreesC to an intensely purple final product. X-ray crystallographic analysis of the purple product indicates that F208 has undergone epsilon -hydroxylation and the resulting phenol has shifted significantly to become st ligand to Fe2 of the diiron cluster. Resonance Raman (RR) spectra of the purple product generated with O-16(2) or O-18(2) show appropriate isotopic sensitivity in bands assigned to O-phenyl and Fe-O-phenyl vibrational modes, confirming that the oxygen of the Fe(III)-phenolate species is derived from Or. Chemical analysis, experiments involving interception of the hydroxylating intermediate with exogenous reductant, and Mossbauer and EXAFS characterization of the brown and purple species establish that F208 hydroxylation occurs during decay of the peroxo complex and formation of the initial brown product. The slow transition to the purple Fe(LII)-phenolate species is ascribed to a ligand rearrangement in which mu -O2- is lost and the F208-derived phenolate coordinates. The reprogramming to F208 monooxygenase requires both amino acid substitutions, as very little epsilon -hydroxyphenylalanine is formed and pathways leading to Y122(.) formation predominate in both R2-D84E and R2-W48F(2-7).

Indelicato, P., G. C. Rodrigues, E. Lindroth, M. A. Ourdane, F. Parente, J. P. Santos, P. Patté, and J. Bieron. "Relativistic and many-body effects on total binding energies of Cesium and other highly-charged ion." Physica Scripta. T92 (2001): 327. Abstract

The determination of atomic masses from highly ionized atoms using Penning Traps requires precise values for electronic binding energies. In the present work, binding energies of several ions (from several elements) are calculated in the framework of two relativistic many-body methods: Relativistic Many-Body Perturbation Theory (RMBPT) and Multi-Configuration Dirac– Fock (MCDF). The ions studied in this work are: Cl (He and Li-like), Se (F and Ne-like), Cs (He, Be, Ne, Al, Cl, Ar, K, Kr, Xe-like and neutral Cs), Hg, Pb and U (Br and Kr-like). Some of them are presented in this paper. Cesium has been treated in more details, allowing for a systematic comparison between MCDF and RMBPT methods. The Cs ions binding energies allow for the determination of atomic Cs mass, which can be used in a QED-independent fine structure constant determination.

Indelicato, P., E. Lindroth, T. Beier, J. Bieron, A. M. Costa, I. Lindgren, J. P. Marques, A. M. Martenson-Pendrill, M. C. Martins, M. A. Ourdane, F. Parente, P. Patté, G. C. Rodrigues, S. Salomonson, and J. P. Santos. "Relativistic Calculations for Trapped Ions." Hyperfine Interactions. 132 (2001): 347-361. AbstractWebsite

We present recent results in the field of total binding energy calculations, Landщ factors, quantum electrodynamics corrections and lifetime that are of interest for ion traps and ion sources. We describe in detail MCDF and RMBPT calculation of ionic binding energies, which are needed for the determination of atomic masses from highly charged ion measurements. We also show new results concerning Landщ factor in 3-electron ions. Finally we describe how relativistic calculations can help understand the physics of heavy ion production ion sources.

Ferreira, I., M. E. V. Costa, L. Pereira, E. Fortunato, R. Martins, A. R. Ramos, and M. F. Silva. "Silicon carbide alloys produced by hot wire, hot wire plasma-assisted and plasma-enhanced CVD techniques." Applied surface science. 184.1 (2001): 8-19. Abstract
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