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2013
Bahubalindruni, Pydi Ganga, Vitor Grade Tavares, Pedro Barquinha, Candido Duarte, Pedro Guedes de Oliveira, Rodrigo Martins, and Elvira Fortunato. "Transparent Current Mirrors With a-GIZO TFTs: Neural Modeling, Simulation and Fabrication." Journal of Display Technology. 9 (2013): 1001-1006. AbstractWebsite
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Araujo, Andreia, Raquel Barros, Tiago Mateus, Diana Gaspar, Nuno Neves, Antonio Vicente, Sergej A. Filonovich, Pedro Barquinha, Elvira Fortunato, Ana M. Ferraria, Ana M. Botelho do Rego, Ana Bicho, Hugo Aguas, and Rodrigo Martins. "Role of a disperse carbon interlayer on the performances of tandem a-Si solar cells." Science and Technology of Advanced Materials. 14 (2013). AbstractWebsite
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Pereira, Filipa, Rui JC Silva, Antonio M. Monge Soares, and Maria Fatima Araujo. "The role of arsenic in Chalcolithic copper artefacts insights from Vila Nova de Sao Pedro (Portugal)." Journal of Archaeological Science. 40.4 (2013): 2045-2056. Abstract
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Mateus, O., C. Neto de Carvalho, and A. A. Klompmaker. "Decapod crustacean body and ichnofossils from the Mesozoic of Portugal." 5th Symposium on Mesozoic and Cenozoic Decapod Crustaceans. Warszawa: Polish Geological Institute − National Research Institute & AGH University of Science and Technology, 2013. mateus_et_al_2013_crustacea_mesozoic_portugal_5th_decapod_crustaceans_meeting_2013.pdf
Araújo, Ricardo, Rui Castanhinha, Rui M. S. Martins, Octávio Mateus, Christophe Hendrickx, F. Beckmann, N. Schell, and L. C. Alves. "Filling the gaps of dinosaur eggshell phylogeny: Late Jurassic Theropod clutch with embryos from Portugal." Scientific Reports. 3.1924 (2013). Abstractaraujo_et_al_2013_filling_the_gaps_of_dinosaur_eggshell_phylogeny_late_jurassic_theropod_clutch_with_embryos_from_portugal.pdf

The non-avian saurischians that have associated eggshells and embryos are represented only by the sauropodomorph Massospondylus and Coelurosauria (derived theropods), thus missing the basal theropod representatives. We report a dinosaur clutch containing several crushed eggs and embryonic material ascribed to the megalosaurid theropod Torvosaurus. It represents the first associated eggshells and embryos of megalosauroids, thus filling an important phylogenetic gap between two distantly related groups of saurischians. These fossils represent the only unequivocal basal theropod embryos found to date. The assemblage was found in early Tithonian fluvial overbank deposits of the Lourinhã Formation in West Portugal. The morphological, microstructural and chemical characterization results of the eggshell fragments indicate very mild diagenesis. Furthermore, these fossils allow unambiguous association of basal theropod osteology with a specific and unique new eggshell morphology.

Quintino, L., L. Liu, R. M. Miranda, R. J. C. Silva, A. Hu, and Y. Zhou. "Cutting NiTi with Femtosecond Laser." Advances in Materials Science and Engineering (2013): 98434. AbstractWebsite
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Cordas, C. M., A. G. Duarte, JJG Moura, and I. Moura. "Electrochemical behaviour of bacterial nitric oxide reductase - Evidence of low redox potential non-heme FeB gives new perspectives on the catalytic mechanism." Biochimica et Biophysica Acta - Bioenergetics. 1827.3 (2013): 233-238. AbstractWebsite
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Pinto, Joana V., Rita Branquinho, Pedro Barquinha, Eduardo Alves, Rodrigo Martins, and Elvira Fortunato. "Extended-Gate ISFETs Based on Sputtered Amorphous Oxides." Journal of Display Technology. 9.9 (2013): 729-734. AbstractWebsite
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Figueiredo, V., JV Pinto, J. Deuermeier, R. Barros, E. Alves, R. Martins, and E. Fortunato. "p-Type CuxO Thin-Film Transistors Produced by Thermal Oxidation." Journal of Display Technology. 9.9 (2013): 6. AbstractWebsite
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Branquinho, R., JV Pinto, T. Busani, P. Barquinha, L. Pereira, P. Viana Baptista, R. Martins, and E. Fortunato. "Plastic Compatible Sputtered Ta2O5 Sensitive Layer for Oxide Semiconductor TFT Sensors." Display Technology, Journal of. 9.9 (2013): 723-728. Abstract

The effect of post-deposition annealing temperature on the pH sensitivity of room temperature RF sputtered Ta2O5 was investigated. Structural and morphological features of these films were analyzed before and after annealing at various temperatures. The deposited films are amorphous up to 600 °C and crystallize at 700 °C in an orthorhombic phase. Electrolyte-insulator-semiconductor (EIS) field effect based sensors with an amorphous Ta2O5 sensing layer showed pH sensitivity above 50 mV/pH. For sensors annealed above 200 °C pH sensitivity decreased with increasing temperature. Stabilized sensor response and maximum pH sensitivity was achieved after low temperature annealing at 200 °C, which is compatible with the use of polymeric substrates and application as sensitive layer in oxides TFT-based sensors.

Ramos, A. M., S. Pereira, M. T. Cidade, G. Pereira, R. Branquinho, L. Pereira, R. Martins, and E. Fortunato. "Preparation and characterization of cellulose nanocomposite hydrogels as functional electrolytes." 242 (2013): 26-32. Abstract
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Miranda, R. M., T. G. Santos, J. Gandra, N. Lopes, and R. J. C. Silva. "Reinforcement strategies for producing functionally graded materials by friction stir processing in aluminium alloys." Journal of Materials Processing Technology. 213.9 (2013): 1609-1615. AbstractWebsite
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Rybarczyk, Y., G. Carrasco, T. Cardoso, and Pavão I. Martins. "A serious game for multimodal training of physician novices." ICER2013 - 6th International Conference of Education, Research and Innovation. Seville, Spain: IATED, 2013. 4944-4949. Abstract

Serious games are usually applied to cognitive learning. However, the development of recent Natural User Interfaces (NUI) enables us to use serious games for a more holistic training. This project proposes to implement an educative game that teaches medical students how to carry out a neurological examination. The purpose is to improve not only the cognitive knowledge of the young physicians but also their sensorimotor skills. The game takes place in a virtual doctor office, which is modelled in 3D. Many possible clinical cases related to different neurologic diseases are simulated. The users are tested at two skill levels. First of all, they have to choose the right exam according to the patient’s symptoms. This initial stage is used to assess the theoretical expertise of the students. If the choice is correct, the physical examination begins. In order to evaluate the motor performance, a Kinect NUI is used. Such a device allows for the natural and intuitive control of the doctor’s avatar because there is a direct link between the individual’s and the avatar’s joints. Due to the fact that the real movements of the student are recorded with some accuracy, it is possible to gauge whether or not the medical gesture is properly applied to the virtual patient. In particular, the force and the precision of the movements are measured and compared to reference values. After each examination immediate feedback is given, so that the learners may rectify their choices and improve the quality of their motor skills at the next training session. Overall, the objective of this software is to enable the future physicians to practice a basic medical exam on a wide scope of neurologic disorders, without any risk for the patients and through an enjoyable approach.

Santos, R., J. Loureiro, A. Nogueira, E. Elangovan, JV Pinto, JP Veiga, T. Busani, E. Fortunato, R. Martins, and I. Ferreira. "Thermoelectric properties of V2O5 thin films deposited by thermal evaporation." Applied Surface Science. 282 (2013): 590-594. AbstractWebsite
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Araújo, João, Miguel Goulão, Ana Moreira, Ines Simão, Vasco Amaral, and Elisa Baniassad. "Advanced Modularity for Building SPL Feature Models: a Model-Driven Approach." 28th ACM Symposium on Applied Computing, Requirements Engineering Track, ACM-SAC 2013. Coimbra, Portugal: ACM, 2013. Abstractaraujo2013sac.pdf

Feature Models are commonly used to specify commonalities and variabilities in Software Product Lines (SPL). Our goal is to enhance feature modeling with traceability and improved support for crosscutting concerns. While traceability will show the features’ requirement-origins, providing means to reason about
their existence, crosscutting concerns will be handled through advanced modularity mechanisms (e.g. aspects), making the impact of changes to SPL models less difficult to understand and analyze. The result is Theme/SPL, a novel SPL requirements technique based on a concern-driven approach (Theme/Doc). Theme/SPL includes the proposal of a domain-specific language for specifying Theme/Doc models and uses model-driven development to generate automatically feature models from them. We show the applicability of the technique through a case study using a within-group design to evaluate the final results and tools developed.

Sampaio, Bruno, Carmen Morgado, and Fernanda Barbosa. "Building Collaborative Quizzes." Proceedings of 13th Koli Calling International Conference on Computing Education Research. Koli, Finland 2013.
Boavida, Nuno, Manuel Baumann, António Brandão Moniz, Jens Schippl, Marcel Weil, and Max Reichenbach Technology transition towards e-mobility: technology assessment as a tool for policy design. International Colloquium of GERPISA - The International Network of the Automobile. Paris: GERPISA, 2013.
Sampaio, Bruno, Carmen Morgado, and Fernanda Barbosa. "Collaborative Quiz Development with EPIK." Proceedings of International Conference on Education and Learning Tecnologies (EDULEARN). Barcelona, Spain 2013.
Pais, {João José Cardoso}, {José Carlos Ribeiro} Kullberg, {João Miguel Dias Joanaz de} Melo, Octávio Mateus, and {José António de} Almeida Arrábida - al-rábita. Associação de Municípos da Região de Lisboa, 2013. Abstract

The publication of the present work - rightly designated as the book of Arrabida's nomination file for inscription on the World Heritage list - has for all of us a special significance as it represents, in a sense, the culmination of a complex, challenging and rewarding process. As is widely known, the Arrábida is included since 2004 in UNESCO's Portuguese tentative list, with AMRS being one of this process' promoters. It wouldn't be appropriate to describe here all the details, but it is fair to say that since 2004 to the present day, we've come a long way in recovering and valuing the Arrábida. It is with sincere satisfaction that we can say: our knowledge of the Property is now deeper, up to date and much more accurate, doing justice to the exceptional values contained within the Arrábida - which is well expressed in the work now published, based on researches and works of the highest scientific value. This is also a regional development project, to value our lands, people and the natural and cultural heritage. The Setúbal's Peninsula is a region that contains within its territory a vast natural and cultural heritage, being the Arrábida one of the most beautiful and significant natural areas in the Mediterranean. The Arrábida Mountain is a place with its own identity, being the result of a long history of Man's adaptation to Nature. It is a place of unmistakable aesthetic beauty, a unique place where nature and culture intertwine; it is a place of contrasts, of land and sea, sky and mountains, a place of combined actions by Man and Nature. Place of vibrant social practices, of rituals and festivals, of knowledge, of representations and expressions, of instruments, objects and artifacts. Place with a history that must be preserved and bequeathed to future generations. Place with monuments of vanished civilizations, but also of living traditions. These are some of the values supporting the Arrábida's nomination for the World's Heritage list. It is a complex and demanding nomination file, which this work is an illustrative sample of. A mixed application - as it includes both the natural and cultural heritage - which, given the richness and uniqueness of the Property in question, is fully justified. It is our profound conviction that this Nomination streamlines the potential of our region, bringing benefits not only to the local population, but also to the whole country. To that extent, it is also a sign of hope and confidence showing that it is possible to build a different future; that by investing in our people, in their abilities, knowledge and traditions, it is possible to create a sustainable development; that is possible to leave for future generations a legacy of which we are proud of having worked on. To be able enjoy this magnificent edition is a step in that direction.

da} Rocha, {Rogério Eduardo Bordalo, {José Carlos Ribeiro} Kullberg, and Octávio Mateus. "A Bacia Lusitaniana: Estratigrafia, Paleogeografia e Tectónica." Geologia de Portugal no contexto da Ibéria. Eds. Dias, R. Araújo, A, Terrinha, P., and {J. C. } Kullberg. Escolar Editora, 2013. 195-347. Abstract
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Mateus, Octávio Cabinda revisited: age and environment of new Cenozoic vertebrate fossils from northern Angola. Vol. 45., 2013. Abstract

In the early 20thcentury, Belgian naturalists reported Paleocene and Eocene sharks, the bothremydid pleurodiran turtleTaphosphrys(formerlyBantuchelys), and a neosuchian and the dyrosaurid crocodyliformCongosaurusfrom coastal outcrops near Landana in the northern province of Cabinda, Angola. In 1935, rare and fragmentary mammals were reported from strata at Malembo Point, south of Landana, and originally considered to be Miocene in age. Subsequent re-identification of the mammal fossils suggested that the Malembo deposits are Lower Oligocene based on the presence of an arsinoithere and hyracoids. An anthropoid canine, originally identified as a carnivore incisor, was also recognized. In four recent expeditions to Cabinda, Projecto PaleoAngola has traced and measured the stratigraphy between Landana and Malembo Point and sampled these deposits for pollen, stable isotopes, detrital zircons, paleomagnetic stratigraphy, and for U/Pb dating of bones, teeth, and coprolites. Although the faunas from all Cabinda localities are dominated by sharks and rays, new discoveries from Landana include a complete cheloniid cryptodire turtle skull, a small snake vertebra, and a bird bone. Discoveries from the Malembo level include a narrow-snouted crocodyliform similar toCongosaurusandEuthecodon, an arsinoithere anterior tooth, an upper molar similar to that of the ptolemaiidanKelba, an unidentified mammalian incisor, and a large primate-like premolar. Recent biostratigraphic advances in East Africa and the new fossil discoveries in Cabinda suggest similarity to late Oligocene faunas in Ethiopia and Kenya, although the large primate-like premolar is unique. To this day, the fossil localities of Malembo provide the only coastal, low latitude, low elevation record of West African Cenozoic terrestrial mammals. https://gsa.confex.com/gsa/2013AM/webprogram/Paper232115.html

Mateus, Octávio. "Cathetosaurus as a valid sauropod genus and comparisons with Camarasaurus." Journal of Vertebrate Paleontology. 2013. 173. Abstract
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Mateus, Octávio Decapod crustacean body and ichnofossils from the Mesozoic of Portugal. Vol. NA., 2013. Abstract

Book of abstracts of the 5th Symposium on Mesozoic and Decapod Crustaceans

Mateus, Octávio. "First definitive association between embryonic Allosaurus bones and prismatoolithus eggs in the Morrison Formation (Upper Jurassic, Wyoming, USA)." Journal of Vertebrate Paleontology. 2013. 101. Abstract

Despite more than a century of collecting, resulting in one of the best-studied vertebrate fossil records anywhere in the world, the Upper Jurassic Morrison Formation has produced surprisingly few examples of dinosaur eggs associated with embryonic remains. Even more puzzling, none of these seem to pertain to the theropod Allosaurus, one of the most common and best-understood dinosaur taxa in the formation. Here we report on a dinosaur nest site that has produced both abundant prismatoolithid eggshell and embryonic (or perinatal) bones of Allosaurus from Fox Mesa, Wyoming. This represents the first such discovery for any theropod in the Jurassic of North America. The nest is heavily weathered but contains a few ellipsoid eggshell clusters that suggest an egg size of about 8 x 6.5 cm. Study of the eggshell morphology and microstructure confirms that a single egg type is present throughout, which is indistinguishable from Prismatoolithus coloradensis. All of the identifiable embryonic materials pertain to theropods, and two premaxillae specimens show the five alveoli diagnostic for Allosaurus among Morrison theropods. This confirms the theropod origin of Prismatoolithus eggs and implicates Allosaurus as the specific Morrison parent taxon. As a result, it is now possible to assign several previous discoveries of dinosaur eggs and potential nests to Allosaurus, including the isolated egg from the Cleveland-Lloyd Quarry. This discovery also calls into question prior assignments of Prismatoolithus eggs to ornithopods, and suggests that more detailed study of such sites is warranted. Prismatoolithus eggshells are also associated with the Upper Jurassic theropod Lourinhanosaurus from Portugal, along with larger embryos that exhibit four premaxillary alveoli.

Alexandre, Fernando, Ricardo Marques, and Hervé Paulino. "Esqueletos Algorítmicos para Paralelismo de Tarefas em Sistemas Multi-GPU." INForum 2013 - Atas do 5º Simpósio de Informática. Eds. João Cachopo, and Beatriz Sousa Santos. Évora, Portugal: Escola de Ciências e Tecnologia da Universidade de Évora, 2013. 238-249. Abstract

A crescente utilização de Unidades de Processamento Gráfico (GPUs) na computação de caráter geral levanta questões de desempenho e de escalabilidade. Para responder a estes requisitos de forma efetiva, cada vez mais se recorre à utilização colaborativa de vários GPUs num só sistema. Esta abordagem introduz, no entanto, novos desafios, tal como a decomposição do domínio do problema e a gestão da possível heterogeneidade dos dispositivos. Neste contexto assume particular relevância a proposta de abstrações que escondam a complexidade da programação destes sistemas. Existe já algum trabalho na área, mas este restringe-se ao paralelismo de dados. Por conseguinte, neste artigo abordamos a utilização de uma biblioteca de esqueletos algorítmicos, Marrow, para a exploração de paralelismo de tarefas em sistemas computacionais com estas características. Os resultados são promissores, apresentado a escalabilidade esperada nos sistemas testados.