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2013
Amado, M. P., T. Lopes, and I. Ramalhete Eco-wall: modular solution for low-cost houses. CISBAT 13. Lausanne, CH: the Swiss Federal Institute of Technology Lausanne (EPFL), Lausanne, ISBN: 978-2-8399-1280-8 , 2013.
Dias, Ricardo J., Tiago M. Vale, and João M. Lourenço. "Efficient support for in-place metadata in Java software transactional memory." Concurrency and Computation: Practice and Experience. 25 (2013): 2394-2411. Abstractccpe2013-dias.pdfWebsite

Software transactional memory (STM) algorithms associate metadata with the memory locations accessed during a transaction's lifetime. This metadata may be stored in an external table by resorting to a mapping function that associates the address of a memory cell with the table entry containing the corresponding metadata (out-place or external strategy). Alternatively, the metadata may be stored adjacent to the associated memory cell by wrapping the cell and metadata together (in-place strategy). The implementation techniques to support these two approaches are very different and each STM framework is usually biased towards one of them, only allowing the efficient implementation of STM algorithms which suit one of the approaches and inhibiting a fair comparison with STM algorithms suiting the other. In this paper, we introduce a technique to implement in-place metadata that does not wrap memory cells, thus overcoming the bias and allowing STM algorithms to directly access the transactional metadata. The proposed technique is available as an extension to Deuce and enables the efficient implementation of a wide range of STM algorithms and their fair (unbiased) comparison in a common STM framework. We illustrate the benefits of our approach by analyzing its impact in two popular transactional memory algorithms with several transactional workloads, TL2 and multiversioning, each befitting out-place and in-place, respectively.

Soares, João, João M. Lourenço, and Nuno Preguiça. "MacroDB: Scaling Database Engines on Multicores." Euro-Par 2013 Parallel Processing. Eds. Felix Wolf, Bernd Mohr, and Dieter Mey. Vol. 8097. Lecture Notes in Computer Science, 8097. Springer Berlin Heidelberg, 2013. 607-619. Abstracteuropar2013-soares.pdf

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Lopes, T., and M. P. Amado Modular solution for the construction of sustainable housing at reduced costs. 2º CIHEL 2013. Lisboa, PT: LNEC, ISBN: 978-178-032-381-7, 2013.
Lourenço, João M., and Eitan Farchi Multicore Software Engineering, Performance, and Tools. Eds. João M. Lourenço, and Eitan Farchi. Vol. 8063. Proceedings of the 2nd International Conference on Multicore Software Engineering, Performance, and Tools, MUSEPAT 2013, Saint Petersburg, Russia, August 19–20, 2013, 8063. Springer Berlin Heidelberg, 2013. Abstract

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Vale, Tiago M., Ricardo J. Dias, and João M. Lourenço. "On the Relevance of Total-Order Broadcast Implementations in Replicated Software Transactional Memories." Multicore Software Engineering, Performance, and Tools. Eds. João M. Lourenço, and Eitan Farchi. Vol. 8063. Lecture Notes in Computer Science, 8063. Springer Berlin Heidelberg, 2013. 49-60. Abstractmusepat13-vale.pdf

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Gouveia, Nuno, Nelson Fernandes, Duarte Faria, António Ramos, and Válter Lúcio. "Punching of Steel Fibre Reinforced Concrete Flat Slabs." fib symposium Tel Aviv 2013. Ed. Fib. Tel Aviv: IACIE, 2013. 1-4. Abstract

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Liu, H., Â. Mestre, and Teresa Sousa. "Rainbow vertex k-connection in graphs." Discrete Applied Mathematics. 161.16-17 (2013): 2549-2555. Abstractrvck-preprint.pdf

Let k be a positive integer and G be a k-connected graph. An edge-coloured path is rainbow if its edges have distinct colours. The rainbow k-connection number of G, denoted by rc_k(G), is the minimum number of colours required to colour the edges of G so that any two vertices of G are connected by k internally vertex-disjoint rainbow paths. The function rc_k(G) was first introduced by Chartrand, Johns, McKeon, and Zhang in 2009, and has since attracted considerable interest. In this paper, we consider a version of the function rc_k(G) which involves vertex-colourings. A vertex-coloured path is vertex-rainbow if its internal vertices have distinct colours. The rainbow vertex k-connection number of G, denoted by rvc_k(G), is the minimum number of colours required to colour the vertices of G so that any two vertices of G are connected by k internally vertex-disjoint vertex-rainbow paths. We shall study the function rvc_k(G) when G is a cycle, a wheel, and a complete multipartite graph. We also construct graphs G where rc_k(G) is much larger than rvc_k(G) and vice versa so that we cannot in general bound one of rc_k(G) and rvc_k(G) in terms of the other.

Silva, João A., Tiago M. Vale, João M. Lourenço, and Hervé Paulino. "Replicação Parcial com Memória Transacional Distribuída." Proceedings of INForum Simpósio de Informática. INForum 2013. Lisbon, Portugal: Faculdade de Ciências e Tecnologia da Universidade Nova de Lisboa, 2013. 310-321. Abstractinforum13-silva.pdf

Os sistemas de memória transacional distribuída atuais recorrem essencialmente à distribuição ou à replicação total para distribuir os seus dados pelos múltiplos nós do sistema. No entanto, estas estratégias de replicação de dados apresentam limitações. A distribuição não oferece tolerância a falhas e a replicação total limita a capacidade de armazenamento do sistema. Nesse contexto, a replicação parcial de dados surge como uma solução intermédia, que combina o melhor das duas anteriores com o intuito de mitigar as suas desvantagens. Esta estratégia tem sido explorada no contexto das bases de dados distribuídas, mas tem sido pouco abordada no contexto da memória transacional e, tanto quanto sabemos, nunca antes tinha sido incorporada num sistema de memória transacional distribuída para uma linguagem de propósito geral. Assim, neste artigo propomos e avaliamos uma infraestrutura para replicação parcial de dados para programas Java bytecode, que foi desenvolvida com base num sistema já existente de memória transacional distribuída. A modularidade da infraestrutura que apresentamos permite a implementação de múltiplos algoritmos e, por conseguinte, avaliar em que contextos de utilização (workloads, número de nós, etc.) a replicação parcial se apresenta como uma alternativa viável a outras estratégias de replicação de dados.

Soares, João, João M. Lourenço, and Nuno Preguiça. "Software Component Replication for Improved Fault-Tolerance: Can Multicore Processors Make It Work?" Dependable Computing. Eds. Marco Vieira, and JoãoCarlos Cunha. Vol. 7869. Lecture Notes in Computer Science, 7869. Springer Berlin Heidelberg, 2013. 173-180. Abstractewdc2013.pdf

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Santos, Susana, Débora Azeitona, Nuno Lapa, João Morais, Helena Lopes, and Benilde Mendes Study on the effect of thermal pre-treatments in the thermophilic anaerobic digestion of a potato peel waste. Proceedings of the International Anaerobic Digestion Symposium within the BioGasWorld 2013. Berlin, Germany: German Society for Sustainable Biogas and Bioenergy Utilisation, 2013. Abstractbiogas_world_2013_santos_et_al_2013.pdf

This work aimed to study the effect of different pre-treatments applied to a potato peel residue, in a thermophilic Anaerobic Digestion (AD) process. All samples were subjected to a mechanical pre-treatment through milling to a particle size below 2 mm. The thermal pre-treatments applied consisted of autoclaving the residue at a gauge pressure of 1.2 bar, under a temperature of 122°C, and for 20, 35 and 55 minutes: assays E122.20, E122.35 and E122.55, respectively. The control assay was performed on a ground residue, which was not submitted to any thermal pre-treatment. All pre-treated residues were subjected to an AD process in a CSTR reactor at 49±1°C. The experimental data showed that the highest methane percentages were very similar (about 92% v/v) for all samples submitted to the thermal pre-treatments. For the control assay, the highest percentage of methane was 87.9% (v/v). The highest biogas yields were recorded in the trial E122.35 (646±50 cm3.g-1 CODremoved), against only 250±20 cm3.g-1 CODremoved for the control assay. The highest biogas yields for VSremoved were attained in the assays E122.55 and E122.35, with values of 646±48 cm3.g-1 VSremoved and 634±59 cm3.g-1 VSremoved, respectively. Globally, the yields registered for the assay E122.35 were similar to those determined in the assay E122.55. Due to the lower energy consumption during the pre-treatment performed in the assay E122.35, this was considered to be the most suitable pre-treatment for this type of residue.

Bernacka-Wojcik, Iwona, Paulo Lopes, Ana Catarina Vaz, Bruno Veigas, Pawel Jerzy Wojcik, Pedro Simões, David Barata, Elvira Fortunato, Pedro Viana Baptista, Hugo Águas, and others. "Bio-microfluidic platform for gold nanoprobe based DNA detection—application to Mycobacterium tuberculosis." Biosensors and Bioelectronics. 48 (2013): 87-93. Abstract
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Núñez, C., C. Silva López, O. N. Faza, J. Fernández-Lodeiro, M. Diniz, R. Bastida, J. L. Capelo, and C. Lodeiro. "Bis(o-methylserotonin)-containing iridium(III) and ruthenium(II) complexes as new cellular imaging dyes: Synthesis, applications, and photophysical and computational studies." Journal of Biological Inorganic Chemistry. 18 (2013): 679-692. AbstractWebsite
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Crusat, Martin, Junfeng Liu, Angelina S. Palma, Robert A. Childs, Yan Liu, Stephen A. Wharton, Yi Pu Lin, Peter J. Coombs, Stephen R. Martin, Mikhail Matrosovich, Zi Chen, David J. Stevens, Vo Minh Hien, Tran Tan Thanh, Le Nguyen Truc Nhu, Lam Anh Nguyet, Do Quang Ha, Rogier H. van Doorn, Tran Tinh Hien, Harald S. Conradt, Makoto Kiso, Steve J. Gamblin, Wengang Chai, John J. Skehel, Alan J. Hay, Jeremy Farrar, Menno D. de Jong, and Ten Feizi. "Changes in the hemagglutinin of H5N1 viruses during human infection - Influence on receptor binding." Virology. 447 (2013): 326-337. Abstract
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Xavier, J., U. Belini, F. Pierron, J. Morais, J. Lousada, and M. Tomazello. "Characterisation of the bending stiffness components of MDF panels from full-field slope measurements." Wood Science and Technology. 47 (2013): 423-441. Abstract
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Vieira, E. M. F., S. Levichev, C. J. Dias, R. Igreja, M. Buljan, S. Bernstorff, O. Conde, A. Chahboun, A. G. Rolo, and M. J. M. Gomes. "Charge storage behavior of nanostructures based on SiGe nanocrystals embedded in Al2O3 matrix." European Physical Journal B. 86 (2013). AbstractWebsite
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Vieira, Eliana M. F., Sergey Levichev, Carlos J. Dias, Rui Igreja, Maja Buljan, Sigrid Bernstorff, Olinda Conde, Adil Chahboun, Anabela G. Rolo, and Maria J. M. Gomes. "Charge storage behavior of nanostructures based on SiGe nanocrystals embedded in Al2O3 matrix." European Physical Journal B. 86 (2013). Abstract
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Lajn, A.a, Von Wenckstern Grundmann Wagner Barquinha Fortunato Martins H. a M. a. "Comparative study of transparent rectifying contacts on semiconducting oxide single crystals and amorphous thin films." Journal of Applied Physics. 113 (2013). AbstractWebsite

We demonstrate fully transparent, highly rectifying contacts (TRC) on amorphous GaInZnO and compare them to TRC fabricated on single crystalline bulk ZnO and heteroepitaxial ZnO thin films. The contacts' transparency in the visible spectral range exceeds 70%. From numerical simulations, we conclude that thermionic emission is the dominating transport mechanism, however, for several samples with low net doping density diffusion theory must be applied. The detailed investigation of the rectification properties of the TRC using temperature-dependent current-voltage and capacitance-voltage measurements reveals that barrier inhomogeneities govern the IV-characteristics of all diodes irrespective of the sample crystallinity. Assuming a Gaussian barrier height distribution, the extracted mean barrier heights typically range between 1.1 and 1.3 V. The width of the barrier distribution correlates with the mean barrier height and ranges from 110 to 130 mV. By compiling literature data, we found that this correlation holds also true for Schottky diodes on elemental and III-V semiconductors. © 2013 American Institute of Physics.

Fernandes, A., J. Lousada, J. Morais, J. Xavier, J. Pereira, and P. Melo-Pinto. "Comparison between neural networks and partial least squares for intra-growth ring wood density measurement with hyperspectral imaging." Computers and Electronics in Agriculture. 94 (2013): 71-81. Abstract
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Aelenei, L., D. Aelenei, H. Gon, R. Lollini, E. Musall, A. Scognamiglio, E. Cubi, and M. Noguchi. "Design issues for net zero-energy buildings." Open House International. 38 (2013): 7-14. AbstractWebsite

Net Zero-Energy Buildings (NZEBs) have received increased attention in recent years as a result of constant concerns about energy supply constraints, decreasing energy resources, increasing energy costs and the rising impact of greenhouse gases on world climate. Promoting whole building strategies that employ passive measures together with energy efficient systems and technologies using renewable energy became a European political strategy following the publication of the Energy Performance of Buildings Directive recast in May 2010 by the European Parliament and Council. However designing successful NZEBs represents a challenge because the definitions are somewhat generic while assessment methods and monitoring approaches remain under development and the literature is relatively scarce about the best sets of solutions for different typologies and climates likely to deliver an actual and reliable performance in terms of energy balance (consumed vs generated) on a cost-effective basis. Additionally the lessons learned from existing NZEB examples are relatively scarce. The authors of this paper, who are participants in the IEA SHC Task 40-ECBCS Annex 52, "Towards Net Zero Energy Solar Buildings", are willing to share insights from on-going research work on some best practice leading NZEB residential buildings. Although there is no standard approach for designing a Net Zero-Energy Building (there are many different possible combinations of passive and efficient active measures, utility equipment and on-site energy generation technologies able to achieve the net-zero energy performance), a close examination of the chosen strategies and the relative performance indicators of the selected case studies reveal that it is possible to achieve zero-energy performance using well known strategies adjusted so as to balance climate drivendemand for space heating/cooling, lighting, ventilation and other energy uses with climate-driven supply from renewable energy resources.

Silva, Tiago A. N., and M. A. R. Loja Differential Evolution on the Minimization of Thermal Residual Stresses in Functionally Graded Structures. Eds. Ana Madureira, Cecilia Reis, and Viriato Marques. Vol. 61. Computational Intelligence and Decision Making Trends and Applications, From Intelligent Systems, Control and Automation: Science and Engineering Bookseries, 61. Dordrecht: Springer Netherlands, 2013. Abstract
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Lima, M. M. R. A., L. F. C. Braz, R. C. C. Monteiro, JP Veiga, AMP Pinto, and AS Pouzada. "Effect of Phosphogypsum on the Clinkerization Temperature of Portland Cement Clincker." Advanced Materials Forum Vi, Pts 1 and 2. 730-732 (2013): 94-99. Abstract
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Lima, M. M. R. A., L. F. C. Braz, R. C. C. Monteiro, and JP Veiga. "Effect of phosphogypsum on the clinkerization temperature of portland cement clincker." Materials Science Forum. 730-732 (2013): 94-99. AbstractWebsite

Phosphogypsum (PG) is a pollutant residue resulting from the production of phosphoric acid in the phosphated fertilizers industry. About 180 millions of tons of PG are generated worldwide per year, which originates storage problems because of the environmental restrictions and the high costs of storage spaces. Taking into account the mineralizer properties of PG it has been studied a way to valorize this residue as an alternative material in the production of Portland cement clinker. The PG and the raw-materials (limestone, marl, sand and iron oxide) were chemical, mineralogical and thermally characterized by X-ray fluorescence (XRF), X-ray diffraction (XRD) and differential thermal analysis and termogravimetric analysis (DTA/TGA). After milling, the phosphogypsum was mixed with the raw-materials in different amounts up to 10% weight. The raw mixtures were submitted to two types of firing schedules, heating up to 1500°C without any holding time or heating up to 1350°C and holding for 20 minutes. After firing, the clinkers were analyzed by optical microscopy, milled and characterized in terms of chemical and mineralogical compositions. The clinkers were used to produce cement mortar according to NP EN 196-1 standard. The resultant test specimens were mechanically tested at 2 and 28 days according to the same standard. The obtained results show a reduction of about 140°C in the clinkerization temperature, when a raw mixture with 5% phosphogypsum was used. Standard clinkers, without phosphogypsum addition, which were fired at 1500°C, originated test specimens with a compressive strength of 48.1MPa at 28 days. Test specimens produced with clinker containing 5% phosphogypsum present higher compressive strength values at 28 days, being 55.1MPa for clinkers produced at 1500°C, and 49.4 MPa for clinkers produced at 1350°C. © (2013) Trans Tech Publications, Switzerland.