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2015
Rodríguez-Martínez, E. V., R. M. R. Cardoso, and A. D. Egídio dos Reis. "Some advances on the Erlang(n) dual risk model." ASTIN Bulletin. 45.1 (2015): 127-150.
Canteiro, Diogo, and Jácome Cunha. "SpreadsheetDoc: An Excel Add-in for Documenting Spreadsheets." Proceedings of the 6th National Symposium of Informatics (INForum’15). Covilhã, Portugal 2015. inforum2015.pdf
Mota, Bruna, Maria Isabel Gomes, Ana Carvalho, and Ana Paula Barbosa-povoa. "Supply chain design and planning accounting for the Triple Bottom Line." 12th International Symposium on Process Systems Engineering and 25th European Symposium on Computer Aided Process Engineering. Copenhagen, Denmark : Elsevier, 2015. 1842-1846. Abstractescape25.pdf

In this work, a multi-objective mixed integer linear programming (moMILP) model is presented for the design and planning of sustainable closed loop supply chains. It includes strategic decisions such as facility location, definition of transportation modes, technology selection and allocation, as well as tactical decisions. The model includes four objectives: 1) The economic pillar, measured through the net present value (NPV); 2) the environmental pillar, which includes Life Cycle Assessment (LCA), through the application of the ReCiPe methodology; 3 and 4) The social pillar measured using two socio-economic indicators applied by the European Union in its Sustainable Development Strategy. The applicability of the model is demonstrated through a representative supply chain case study. Results show that the different objectives influence the supply chain structure and translate in significantly different and conflicting decisions, showing the importance of such type of models to better understand the decisions implications on the different dimensions of sustainability.

Casimiro, Ana, and César Rodrigo. ""Symmetry-preserving discretization of variational field theories"." Arxiv (2015).
Carvalho, L. C. R., D. Ribeiro, R. S. G. R. Seixas, A. M. S. Silva, M. Nave, A. C. Martins, S. Erhardt, E. Fernandes, E. J. Cabrita, and M. M. B. Marques. "Synthesis and evaluation of new benzimidazole-based COX inhibitors: a naproxen-like interaction detected by STD-NMR." RSC Advances. 5 (2015): 49098-49109. AbstractWebsite

Non-steroidal anti-inflammatory drugs exert their pharmacological activity through inhibition of cyclooxygenase 1 and 2 (COX-1 and COX-2). Recent research suggests that a balanced inhibition of both COX-1 and COX-2 is the key to reduce the side-effects exhibited by COX inhibitors. We developed new benzimidazole-based compounds that showed a balanced COX inhibition, supported by molecular docking screening. The human whole blood assays demonstrated that the ester derivatives were potent inhibitors. Competitive saturation transfer difference (STD)-NMR experiments, in the presence of COX-2, using naproxen and diclofenac demonstrated that ester derivatives do not compete with diclofenac for the same binding site, but compete with the allosteric inhibitor naproxen. Combination of NMR spectroscopy with molecular docking has permitted us to detect a new naproxen-like inhibitor, which could be used for future drug development.

Martins, J., L. Camarinha-Matos, J. Goes, and L. Gomes Towards Cloud-Based Engineering Systems. 6th IFIP WG 5.5/SOCOLNET Doctoral Conference on Computing, Electrical and Industrial Systems, DoCEIS’2015. Caparica, Portugal: IFIP WG 5.5/SOCOLNET, 2015.
Mota, Bruna, Maria Isabel Gomes, Ana Carvalho, and Ana P. Barbosa-Povoa. "Towards supply chain sustainability: economic, environmental and social design and planning." Journal of Cleaner Production. 105 (2015): 14-27.2015_motagomescarvalhobpovoa_jcp.pdfWebsite
Galveia, B., Cardoso, T., Santos V., and Rybarczyk Y. "Towards the creation of a Gesture Library." EAI Endorsed Transactions on Creative Technologies. 15.3 (2015): e3.Website
Galveia, Bruno, Tiago Cardoso, Vitor Santor, and Yves Rybarczyk. "Towards the creation of a gesture library." EAI Endorsed Transactions on Creative Technologies. 2 (2015): 1-8. Abstract

The evolution of technology has risen new possibilities in the so called Natural User Interfaces research area. Among distinct initiatives, several researchers are working with the existing sensors towards improving the support to gesture languages. This article tackles the recognition of gestures, using the Kinect sensor, in order to create a gesture library and support the gesture recognition processes afterwards.

Maia, Pedro, Jorge Mendes, Jácome Cunha, Henrique Rebêlo, and João Saraiva. "Towards the Design and Implementation of Aspect-Oriented Programming for Spreadsheets." Proceedings of the 2nd Workshop on Software Engineering methods in Spreadsheets co-located with the 37th International Conference on Software Engineering (ICSE 2015). Eds. Felienne Hermans, Richard F. Paige, and Peter Sestof. SEMS '15. 2015. Abstractsems15.pdf

A spreadsheet usually starts as a simple and single- user software artifact, but, as frequent as in other software systems, quickly evolves into a complex system developed by many actors. Often, different users work on different aspects of the same spreadsheet: while a secretary may be only involved in adding plain data to the spreadsheet, an accountant may define new business rules, while an engineer may need to adapt the spreadsheet content so it can be used by other software systems. Unfortunately, spreadsheet systems do not offer modular mechanisms, and as a consequence, some of the previous tasks may be defined by adding intrusive “code” to the spreadsheet.

In this paper we go through the design and implementation of an aspect-oriented language for spreadsheets so that users can work on different aspects of a spreadsheet in a modular way. For example, aspects can be defined in order to introduce new business rules to an existing spreadsheet, or to manipulate the spreadsheet data to be ported to another system. Aspects are defined as aspect-oriented program specifications that are dynamically woven into the underlying spreadsheet by an aspect weaver. In this aspect-oriented style of spreadsheet development, different users develop, or reuse, aspects without adding intrusive code to the original spreadsheet. Such code is added/executed by the spreadsheet weaving mechanism proposed in this paper.

Gonçalves, L., Z. Santos, Miguel Amado, I. Craveiro, J. Cabral, Lapão L.V., A. P. Delgado, A. Correia, D. Alves, and R. Simões. "Urban Planning and Health Inequities: looking in a small-scale in a City of Cape Verde." PLOSone. 23/11/2015.DOI: 10.1371/journal.pone.0142955 (2015).
Santos, Vitor, Carolina Santos, and Tiago Cardoso. "Use of sociology concepts as the basis of a model for improving accessibility in Smart Cities." Procedia Computer Science. 67 (2015): 409-418. Abstract

The use of mobile devices and their use for Internet access, for georeferentiation and services consumption had a huge increase.

Today, these devices ability to establish cooperation networks and to interact intelligently and cooperatively with the surrounding environment has growing importance.

In this paper, we propose a system, based on a model which uses the social paradigms in mobile ubiquitous interactions, capable to effectively connect and integrate these devices in order to improve the accessibility in the cities. The model is inspired in concepts from the theory of organizations and sociology, as the notions of “social role”, “ownership” and “responsibility”, to be incorporated in each device.

We present an example for applying the model in the context of accessibility in smart cities for the pedestrian traffic light automatic management.

Clemmensen, Lars B., Jesper Milàn, Jan Schulz Adolfssen, Eliza Jarl Estrup, Nicolai Frobøse, Nicole Klein, Octávio Mateus, and Oliver Wings. "The vertebrate-bearing Late Triassic Fleming Fjord Formation of central East Greenland revisited: stratigraphy, palaeoclimate and new palaeontological data." Geological Society, London, Special Publications. 434.1 (2015): 31-47. Abstractclemmensenetal2015greenland.pdfWebsite

In Late Triassic (Norian–Rhaetian) times, the Jameson Land Basin lay at 40° N on the northern part of the supercontinent Pangaea. This position placed the basin in a transition zone between the relatively dry interior of the supercontinent and its more humid periphery. Sedimentation in the Jameson Land Basin took place in a lake–mudflat system and was controlled by orbitally forced variations in precipitation. Vertebrate fossils have consistently been found in these lake deposits (Fleming Fjord Formation), and include fishes, dinosaurs, amphibians, turtles, aetosaurs and pterosaurs. Furthermore, the fauna includes mammaliaform teeth and skeletal material. New vertebrate fossils were found during a joint vertebrate palaeontological and sedimentological expedition to Jameson Land in 2012. These new finds include phytosaurs, a second stem testudinatan specimen and new material of sauropodomorph dinosaurs, including osteologically immature individuals. Phytosaurs are a group of predators common in the Late Triassic, but previously unreported from Greenland. The finding includes well-preserved partial skeletons that show the occurrence of four individuals of three size classes. The new finds support a late Norian–early Rhaetian age for the Fleming Fjord Formation, and add new information on the palaeogeographical and palaeolatitudinal distribution of Late Triassic faunal provinces.

Franco, José, Fátima Trindade, Sandra Silva, Miguel Palha, and Tiago Cardoso. "“No Reino dos Fonemas” jogo sério para a aprendizagem da leitura." (2015). Abstract

Neste artigo é apresentado um jogo sério que visa auxiliar a iniciação da aprendizagem do Princípio Alfabético
(discriminação auditiva dos sons das vogais) em crianças com dificuldades na aprendizagem (em particular
com alterações na consciência fonológica). Para isso são estudados vários motores de jogo e o conceito de elearning. São mostrados os vários cenários do jogo bem como as suas funcionalidades e propósitos. Este jogo
foi criado para capacitar instituições de apoio a crianças com perturbações do neurodesenvolvimento.

Silva, Tiago A. N., M. A. R. Loja, A. Carvalho, Nuno M. M. Maia, and J. I. Barbosa Adaptive Empirical Distributions in the Framework of Inverse Problems (submitted). International Journal of Computational Methods in Engineering Science and Mechanics., 2015. Abstract
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Klein, Hendrik, Jesper Milàn, Lars B. Clemmensen, Nicolaj Frobøse, Octávio Mateus, Nicole Klein, Jan S. Adolfssen, Eliza J. Estrup, and Oliver Wings. "Archosaur footprints (cf. Brachychirotherium) with unusual morphology from the Upper Triassic Fleming Fjord Formation (Norian–Rhaetian) of East Greenland." Geological Society, London, Special Publications. 434 (2015). AbstractWebsite

The Ørsted Dal Member of the Upper Triassic Fleming Fjord Formation in East Greenland is well known for its rich vertebrate fauna, represented by numerous specimens of both body and ichnofossils. In particular, the footprints of theropod dinosaurs have been described. Recently, an international expedition discovered several slabs with 100 small chirotheriid pes and manus imprints (pes length 4–4.5 cm) in siliciclastic deposits of this unit. They show strong similarities with Brachychirotherium, a characteristic Upper Triassic ichnogenus with a global distribution. A peculiar feature in the Fleming Fjord specimens is the lack of a fifth digit, even in more deeply impressed imprints. Therefore, the specimens are assigned here tentatively to cf. Brachychirotherium. Possibly, this characteristic is related to the extremely small size and early ontogenetic stage of the trackmaker. The record from Greenland is the first evidence of this morphotype from the Fleming Fjord Formation. Candidate trackmakers are crocodylian stem group archosaurs; however, a distinct correlation with known osteological taxa from this unit is not currently possible. While the occurrence of sauropodomorph plateosaurs in the bone record links the Greenland assemblage more closer to that from the Germanic Basin of central Europe, here the described footprints suggest a Pangaea-wide exchange.Supplementary material: Three-dimensional model of cf. Brachychirotherium pes–manus set (from MGUH 31233b) from the Upper Triassic Fleming Fjord Formation (Norian–Rhaetian) of East Greenland as pdf, ply and jpg files (3D model created by Oliver Wings; photographs taken by Jesper Milàn) is available at https://doi.org/10.6084/m9.figshare.c.2133546

Correia, H. D., J. Marangon, CD Brondino, JJG Moura, MJ Romão, P. J. González, and T. Santos-Silva. "Aromatic aldehydes at the active site of aldehyde oxidoreductase from Desulfovibrio gigas: Reactivity and molecular details of the enzyme-substrate and enzyme-product interaction." Journal of Biological Inorganic Chemistry. 20 (2015): 219-229. Abstract
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Correia, Hugo D., Jacopo Marangon, Carlos D. Brondino, Jose J. G. Moura, Maria J. Romao, Pablo J. Gonzalez, and Teresa Santos-Silva. "Aromatic aldehydes at the active site of aldehyde oxidoreductase from Desulfovibrio gigas: reactivity and molecular details of the enzyme-substrate and enzyme-product interaction (vol 20, pg 219, 2015)." Journal of Biological Inorganic Chemistry. 20 (2015): 231. Abstract
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Campos, Artur André Martinez, and João Correia de Freitas. "Assessing and implementing {English}-learning mobile applications in a {University} {Graduation} {Program}: {SLA} 2.0." Proceedings of the Computer Supported Education 2015 (2015). Abstract
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Fernández-Cabo, J. L., R. Widmann, M. Arce-Blanco, R. Crocetti, J. Xavier, and A. Majano-Majano. "Assessment of wire-frame analysis models of a historical planked timber arch." Proceedings of the Institution of Civil Engineers - Structures and Buildings. 168 (2015): 680-694. AbstractWebsite
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Mendes, Manuel J., Seweryn Morawiec, Tiago Mateus, Andriy Lyubchyk, Hugo Águas, Isabel Ferreira, Elvira Fortunato, Rodrigo Martins, Francesco Priolo, and Isodiana Crupi. "Broadband light trapping in thin film solar cells with self-organized plasmonic nano-colloids." Nanotechnology. 26 (2015): 135202. Abstract
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Fernandes, Susete, Luis Aguirre, Rita Pontes, João Canejo, Pedro Brogueira, Eugene Terentjev, and Maria Helena Godinho. "Cellulose-based nanostructures for photoresponsive surfaces." Cellulose (2015): 1-12. Abstract
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Brás, Raul, and Orestes J. Cerdeira. "Computational Comparison of Algorithms for a Generalization of the Node-Weighted Steiner Tree and Forest Problems." Operational Research. Springer Science $\mathplus$ Business Media, 2015. 67-83. Abstract
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Gabriel, A., J. Machado, R. Gomes, J. M. P. Coelho, C. O. Silva, C. P. Reis, J. P. Santos, and P. Vieira. "Concentrated photoactivation: focusing light through scattering." World Congress on Medical Physics and Biomedical Engineering, June 7-12, 2015, Toronto, Canada. Ed. David A. Jaffray. Cham: Springer International Publishing, 2015. 1727-1730. Abstract

Light has long being used in medicine; however, the high scattering of biological tissues always hindered its use. The aim of this work is the development of methodologies to focus light inside biological tissues. Geant4/GAMOS Monte Carlo platform was used to simulate the possibility of parameterize the time delay of multiple sources of external light, offset in time, as a function of the interest region position in order to create constructive interferences in a breast sample. A computational model was implemented and the platform was configured in order to perform these simulations. Preliminary results using a single light source were performed. It was concluded that scattering in adipose tissue is very high which is consistent with previous studies.

Seixas, Joao D., Marino F. A. Santos, Abhik Mukhopadhyay, Ana C. Coelho, Patricia M. Reis, Luis F. Veiros, Ana R. Marques, Nuno Penacho, Ana M. L. Goncalves, Maria J. Romao, Goncalo J. L. Bernardes, Teresa Santos-Silva, and Carlos C. Romao. "A contribution to the rational design of Ru(CO)(3)Cl2L complexes for in vivo delivery of CO." Dalton Transactions. 44 (2015): 5058-5075. Abstract
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