Publications

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2008
Viegas, Aldino, Natercia F. Bras, Nuno M. F. S. A. Cerqueira, Pedro Alexandrino Fernandes, Jose A. M. Prates, Carlos M. G. A. Fontes, Marta Bruix, Maria Joao Romao, Ana Luisa Carvalho, Maria Joao Ramos, Anjos L. Macedo, and Eurico J. Cabrita. "Molecular determinants of ligand specificity in family 11 carbohydrate binding modules - an NMR, X-ray crystallography and computational chemistry approach." Febs Journal. 275 (2008): 2524-2535. Abstract
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2007
Carvalho, Ana Luisa, Fernando M. V. Dias, Tibor Nagy, Jose A. M. Prates, Mark R. Proctor, Nicola Smith, Edward A. Bayer, Gideon J. Davies, Luis M. A. Ferreira, Maria J. Romao, Carlos M. G. A. Fontes, and Harry J. Gilbert. "Evidence for a dual binding mode of dockerin modules to cohesins." Proceedings of the National Academy of Sciences of the United States of America. 104 (2007): 3089-3094. Abstract
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Coelho, Catarina, Pablo J. Gonzalez, Jose Trincao, Ana L. Carvalho, Shabir Najmudin, Thomas Hettman, Stephan Dieckman, Jose J. G. Moura, Isabel Moura, and Maria J. Romao. "Heterodimeric nitrate reductase (NapAB) from Cupriavidus necator H16: purification, crystallization and preliminary X-ray analysis." Acta Crystallographica Section F-Structural Biology and Crystallization Communications. 63 (2007): 516-519. Abstract
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2006
Santos-Silva, T., J. Trincao, AL Carvalho, C. Bonifacio, F. Auchere, P. Raleiras, I. Moura, JJG Moura, and MJ Romao. "The first crystal structure of class III superoxide reductase from Treponema pallidum." Journal of Biological Inorganic Chemistry. 11 (2006): 548-558. Abstract
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Najmudin, S., CIPD Guerreiro, AL Carvalho, JAM Prates, MAS Correia, V. D. Alves, LMA Ferreira, MJ Romao, HJ Gilbert, DN Bolam, and CMGA Fontes. "Xyloglucan is recognized by carbohydrate-binding modules that interact with beta-glucan chains." Journal of Biological Chemistry. 281 (2006): 8815-8828. Abstract
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2005
Carvalho, AL, VMR Pires, TM Gloster, JP Turkenburg, JAM Prates, LMA Ferreira, MJ Romao, GJ Davies, CMGA Fontes, and HJ Gilbert. "Insights into the structural determinants of cohesin dockerin specificity revealed by the crystal structure of the type II cohesin from Clostridium thermocellum SdbA." Journal of Molecular Biology. 349 (2005): 909-915. Abstract
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Santos-Silva, T., J. Trincao, AL Carvalho, C. Bonifacio, F. Auchere, I. Moura, JJG Moura, and MJ Romao. "Superoxide reductase from the syphilis spirochete Treponema pallidum: crystallization and structure determination using soft X-rays." Acta Crystallographica Section F-Structural Biology and Crystallization Communications. 61 (2005): 967-970. Abstract
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2004
Carvalho, AL, A. Goyal, JAM Prates, DN Bolam, HJ Gilbert, VMR Pires, LMA Ferreira, A. Planas, MJ Romao, and CMGA Fontes. "The family 11 carbohydrate-binding module of Clostridium thermocellum Lic26A-Cel5E accommodates beta-1,4- and beta-1,3-1,4-mixed linked glucans at a single binding site." Journal of Biological Chemistry. 279 (2004): 34785-34793. Abstract
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2003
Carvalho, AL, FMV Dias, JAM Prates, T. Nagy, HJ Gilbert, GJ Davies, LMA Ferreira, MJ Romao, and CMGA Fontes. "Cellulosome assembly revealed by the crystal structure of the cohesin-dockerin complex." Proceedings of the National Academy of Sciences of the United States of America. 100 (2003): 13809-13814. Abstract
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2002
Carvalho, AL, L. Sanz, D. Barettino, A. Romero, JJ Calvete, and MJ Romao. "Crystal structure of a prostate kallikrein isolated from stallion seminal plasma: A homologue of human PSA." Journal of Molecular Biology. 322 (2002): 325-337. Abstract
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2001
Carvalho, AL, JM Dias, L. Sanz, A. Romero, JJ Calvete, and MJ Romao. "Purification, crystallization and identification by X-ray analysis of a prostate kallikrein from horse seminal plasma." Acta Crystallographica Section D-Biological Crystallography. 57 (2001): 1180-1183. Abstract

The purification, crystallization and identification by X-ray diffraction analysis of a horse kallikrein is reported. The protein was purired from horse seminal plasma. Crystals belong to space group C2 and the structure was solved by the MIRAS method, with two heavy-atom derivatives of mercury and platinum. X-ray diffraction data to 1.42 Angstrom resolution were collected at the ESRF synchrotron-radiation source.

1999
Archer, M., AL Carvalho, S. Teixeira, I. Moura, JJG Moura, F. Rusnak, and MJ Romao. "Structural studies by X-ray diffraction on metal substituted desulforedoxin, a rubredoxin-type protein." Protein Science. 8 (1999): 1536-1545. Abstract
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1997
Romao, MJ, I. Kolln, JM Dias, AL Carvalho, A. Romero, P. F. Varela, L. Sanz, E. Topfer-Petersen, and JJ Calvete. "Crystal structure of acidic seminal fluid protein (aSFP) at 1.9 angstrom resolution: a bovine polypeptide of the spermadhesin family." Journal of Molecular Biology. 274 (1997): 650-660. Abstract

We report the three-dimensional crystal structure of acidic seminal fluid protein (aSFP), a 12.9 kDa poly-peptide of the spermadhesin family isolated from bovine seminal plasma, solved by the multiple isomorphous replacement method and refined with data to 1.9 Angstrom resolution with a final R-factor of 17.3%. aSFP is built by a single CUB domain architecture, a 100 to 110 amino-acid-residue extracellular module found in 16 functionally diverse proteins. The structure of aSFP reveals that the CUB domain displays a beta-sandwich topology organised into two 5-stranded beta-sheets, each of which contain two parallel and four antiparallel strands. The structure of aSFP is almost identical to that of porcine spermadhesins PSP-I and PSP-II, which in turn show limited structural similarity with jellyroll topologies of certain virus capsid proteins. Essentially, topologically conserved residues in these proteins are those internal amino acids forming the hydrophobic core of the CUB and the jellyroll domains, suggesting their importance in maintaining the integrity of these protein folds, On the other hand, the structure of aSFP shows structural features that are unique to this protein and which may provide a structural ground for understanding the distinct biological properties of different members of the spermadhesin protein family. (C) 1997 Academic Press Limited.

Romero, A., MJ Romao, P. F. Varela, I. Kolln, JM Dias, AL Carvalho, L. Sanz, E. TopferPetersen, and JJ Calvete. "The crystal structures of two spermadhesins reveal the CUB domain fold." Nature Structural Biology. 4 (1997): 783-788. Abstract

Spermadhesins, 12,000-14,000 M-r mammalian proteins, include lectins involved in sperm-egg binding and display a single CUB domain architecture. We report the crystal structures of porcine seminal plasma PSP-I/PSP-II, a heterodimer of two glycosylated spermadhesins. and bovine aSFP at 2.4 Angstrom and 1.9 Angstrom resolution respectively.

Dias, JM, AL Carvalho, I. Kolln, JJ Calvete, E. TopferPetersen, P. F. Varela, A. Romero, C. Urbanke, and MJ Romao. "Crystallization and preliminary x-ray diffraction studies of aSFP, a bovine seminal plasma protein with a single CUB domain architecture." Protein Science. 6 (1997): 725-727. Abstract

{Bovine acidic seminal fluid protein (aSFP) is a 12.9 kDa polypeptide of the spermadhesin family built by a single CUB domain architecture. The CUB domain is an extracellular module present in 16 functionally diverse proteins. To determine the three-dimensional structure of aSFP, the protein was crystallized at 21 degrees C by vapor diffusion in hanging drops, using ammonium sulfate, pH 4.7, and polyethyleneglycol 4000 as precipitants, containing 10% dioxane to avoid the formation of clustered crystals. Elongated prismatic crystals with maximal size of 0.6 x 0.3 x 0.2 mm(3) diffract to beyond 1.9 Angstrom resolution and belong to space group P2(1)2(1)2, with cell parameters a = 52.4 Angstrom