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Submitted
Roldao, Antonio, Manuel J. T. Carrondo, Paula M. Alves, and R. Oliveira. "{Stochastic simulation of protein expression in the baculovirus/insect cells system}." {COMPUTERS & CHEMICAL ENGINEERING}. {32} (Submitted): {68-77}. Abstract
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Teixeira, Ana P., Carlos Alves, Paula M. Alves, Manuel J. T. Carrondo, and Rui Oliveira. "{Hybrid elementary flux analysis/nonparametric modeling: application for bioprocess control}." {BMC BIOINFORMATICS}. {8} (Submitted). Abstract
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Isidro, Ines A., Ana R. Ferreira, Joao J. Clemente, Antonio E. Cunha, and Rui Oliveira. "{Analysis of culture media screening data by projection to latent pathways: The case of Pichia pastoris X-33}." {JOURNAL OF BIOTECHNOLOGY}. {217} (Submitted): {82-89}. Abstract
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von Stosch, Moritz, Rui Oliveira, Joana Peres, and Sebastiao Feyo de Azevedo. "{Hybrid semi-parametric modeling in process systems engineering: Past, present and future}." {COMPUTERS & CHEMICAL ENGINEERING}. {60} (Submitted): {86-101}. Abstract
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Teixeira, Ana P., Sonia Sa Santos, Nuno Carinhas, Rui Oliveira, and Paula M. Alves. "{Combining metabolic flux analysis tools and C-13 NMR to estimate intracellular fluxes of cultured astrocytes}." {NEUROCHEMISTRY INTERNATIONAL}. {52} (Submitted): {478-486}. Abstract
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Roldao, Antonio, Maria Candida M. Mellado, J. C. Lima, Manuel J. T. Carrondo, Paula M. Alves, and R. Oliveira. "{On the Effect of Thermodynamic Equilibrium on the Assembly Efficiency of Complex Multi-Layered Virus-Like Particles (VLP): the Case of Rotavirus VLP}." {PLOS COMPUTATIONAL BIOLOGY}. {8} (Submitted). Abstract
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Carinhas, Nuno, Vicente Bernal, Ana P. Teixeira, Manuel J. T. Carrondo, Paula M. Alves, and Rui Oliveira. "{Hybrid metabolic flux analysis: combining stoichiometric and statistical constraints to model the formation of complex recombinant products}." {BMC SYSTEMS BIOLOGY}. {5} (Submitted). Abstract
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Teixeira, Ana P., Tiago M. Duarte, Rui Oliveira, Manuel J. T. Carrondo, and Paula M. Alves. "{High-throughput analysis of animal cell cultures using two-dimensional fluorometry}." {JOURNAL OF BIOTECHNOLOGY}. {151} (Submitted): {255-260}. Abstract
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Carrondo, Manuel J. T., Paula M. Alves, Nuno Carinhas, Jarka Glassey, Friedemann Hesse, Otto-Wilhelm Merten, Martina Micheletti, Thomas Noll, Rui Oliveira, Udo Reichl, Arne Staby, Ana P. Teixeira, Henry Weichert, and Carl-Fredrik Mandenius. "{How can measurement, monitoring, modeling and control advance cell culture in industrial biotechnology?}." {BIOTECHNOLOGY JOURNAL}. {7} (Submitted): {1522-1529}. Abstract
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Pardelha, Filipa, Maria G. E. Albuquerque, Maria A. M. Reis, Joao M. L. Dias, and Rui Oliveira. "{Flux balance analysis of mixed microbial cultures: Application to the production of polyhydroxyalkanoates from complex mixtures of volatile fatty acids}." {JOURNAL OF BIOTECHNOLOGY}. {162} (Submitted): {336-345}. Abstract
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Torres, Cristiana A. V., Rodolfo Marques, Silvia Antunes, Vitor D. Alves, Isabel Sousa, Ana Maria Ramos, Rui Oliveira, Filomena Freitas, and Maria A. M. Reis. "{Kinetics of production and characterization of the fucose-containing exopolysaccharide from Enterobacter A47}." {JOURNAL OF BIOTECHNOLOGY}. {156} (Submitted): {261-267}. Abstract
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Teixeira, Ana P., Nuno Carinhas, Jodo M. L. Dias, Pedro Cruz, Paula M. Alves, Manuel J. T. Carrondo, and Rui Oliveira. "{Hybrid semi-parametric mathematical systems: Bridging the gap between systems biology and process engineering}." {JOURNAL OF BIOTECHNOLOGY}. {132} (Submitted): {418-425}. Abstract
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von Stosch, Moritz, Rui Oliveira, Joana Peres, and Sebastiao Feyo de Azevedo. "{A general hybrid semi-parametric process control framework}." {JOURNAL OF PROCESS CONTROL}. {22} (Submitted): {1171-1181}. Abstract
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Oliveira, R., R. Simutis, and SF de Azevedo. "{Design of a stable adaptive controller for driving aerobic fermentation processes near maximum oxygen transfer `capacity}." {JOURNAL OF PROCESS CONTROL}. {14} (Submitted): {617-626}. Abstract
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Pardelha, F., M. G. E. Albuquerque, G. Carvalho, M. A. M. Reis, J. M. L. Dias, and R. Oliveira. "{Segregated flux balance analysis constrained by population structure/function data: The case of PHA production by mixed microbial cultures}." {BIOTECHNOLOGY AND BIOENGINEERING}. {110} (Submitted): {2267-2276}. Abstract
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Costa, F., L. Alvarez, A. I. Lozano, F. Blanco, J. C. Oller, A. Munoz, A. Souza Barbosa, M. H. F. Bettega, F. Ferreira da Silva, P. Limao-Vieira, R. D. White, M. J. Brunger, and G. Garcia. "{Experimental and theoretical analysis for total electron scattering cross sections of benzene}." {JOURNAL OF CHEMICAL PHYSICS}. {151} (Submitted). Abstract
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Teixeira, A., A. E. Cunha, J. J. Clemente, JL Moreira, HJ Cruz, P. M. Alves, M. J. T. Carrondo, and R. Oliveira. "{Modelling and optimization of a recombinant BHK-21 cultivation process using hybrid grey-box systems}." {JOURNAL OF BIOTECHNOLOGY}. {118} (Submitted): {290-303}. Abstract
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Oller, J. C., L. Ellis-Gibbings, F. Ferreira da Silva, P. Limao-Vieira, and G. Garcia. "{Novel experimental setup for time-of-flight mass spectrometry ion detection in collisions of anionic species with neutral gas-phase molecular targets}." {EPJ TECHNIQUES AND INSTRUMENTATION}. {2} (Submitted). Abstract
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Goerke, Aaron R., Johannes Scholten, Nedim Emil Altaras, Ana Teixeira, Joao Clemente, Antonio Cunha, Rui Oliveira, and John G. Aunins. "{BIOT 328-Fast development of Pichia pastoris cultures based on hybrid semiparametric process control}." {ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY}. {236} (Submitted). Abstract
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Santos, J. L. C., A. M. Hidalgo, R. Oliveira, S. Velizarov, and J. G. Crespo. "{Analysis of solvent flux through nanofiltration membranes by mechanistic, chemometric and hybrid modelling}." {JOURNAL OF MEMBRANE SCIENCE}. {300} (Submitted): {191-204}. Abstract
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Ferreira, A. R., J. M. L. Dias, M. von Stosch, J. Clemente, A. E. Cunha, and Rui Oliveira. "{Fast development of Pichia pastoris GS115 Mut(+) cultures employing batch-to-batch control and hybrid semi-parametric modeling}." {BIOPROCESS AND BIOSYSTEMS ENGINEERING}. {37} (Submitted): {629-639}. Abstract
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Dias, Joao M. L., Filipa Pardelha, Mario Eusebio, Maria A. M. Reis, and Rui Oliveira. "{On-line monitoring of PHB production by mixed microbial cultures using respirometry, titrimetry and chemometric modelling}." {PROCESS BIOCHEMISTRY}. {44} (Submitted): {419-427}. Abstract
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Glassey, Jarka, Krist V. Gernaey, Christoph Clemens, Torsten W. Schulz, Rui Oliveira, Gerald Striedner, and Carl-Fredrik Mandenius. "{Process analytical technology (PAT) for biopharmaceuticals}." {BIOTECHNOLOGY JOURNAL}. {6} (Submitted): {369-377}. Abstract
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Ribar, Anita, Marian Danko, Juraj Orszagh, Filipe Ferreira da Silva, Ivo Utke, and Stefan Matejcik. "{Dissociative excitation study of iron pentacarbonyl molecule}." {EUROPEAN PHYSICAL JOURNAL D}. {69} (Submitted). Abstract
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Peres, J., R. Oliveira, and Feyo S. de Azevedo. "{Bioprocess hybrid parametric/nonparametric modelling based on the concept of mixture of experts}." {BIOCHEMICAL ENGINEERING JOURNAL}. {39} (Submitted): {190-206}. Abstract
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