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2015
Rybarczyk, Y., Seabra, J., Vernay, D., Rybarczyk, P., and Lebret M.C. "Towards an augmented assistance dog." 3rd World Conference on Information Systems and Technologies. Azores, Portugal 2015. copy.pdf
Martins, J., L. Camarinha-Matos, J. Goes, and L. Gomes Towards Cloud-Based Engineering Systems. 6th IFIP WG 5.5/SOCOLNET Doctoral Conference on Computing, Electrical and Industrial Systems, DoCEIS’2015. Caparica, Portugal: IFIP WG 5.5/SOCOLNET, 2015.
Mota, Bruna, Maria Isabel Gomes, Ana Carvalho, and Ana P. Barbosa-Povoa. "Towards supply chain sustainability: economic, environmental and social design and planning." Journal of Cleaner Production. 105 (2015): 14-27.2015_motagomescarvalhobpovoa_jcp.pdfWebsite
Maia, Pedro, Jorge Mendes, Jácome Cunha, Henrique Rebêlo, and João Saraiva. "Towards the Design and Implementation of Aspect-Oriented Programming for Spreadsheets." Proceedings of the 2nd Workshop on Software Engineering methods in Spreadsheets co-located with the 37th International Conference on Software Engineering (ICSE 2015). Eds. Felienne Hermans, Richard F. Paige, and Peter Sestof. SEMS '15. 2015. Abstractsems15.pdf

A spreadsheet usually starts as a simple and single- user software artifact, but, as frequent as in other software systems, quickly evolves into a complex system developed by many actors. Often, different users work on different aspects of the same spreadsheet: while a secretary may be only involved in adding plain data to the spreadsheet, an accountant may define new business rules, while an engineer may need to adapt the spreadsheet content so it can be used by other software systems. Unfortunately, spreadsheet systems do not offer modular mechanisms, and as a consequence, some of the previous tasks may be defined by adding intrusive “code” to the spreadsheet.

In this paper we go through the design and implementation of an aspect-oriented language for spreadsheets so that users can work on different aspects of a spreadsheet in a modular way. For example, aspects can be defined in order to introduce new business rules to an existing spreadsheet, or to manipulate the spreadsheet data to be ported to another system. Aspects are defined as aspect-oriented program specifications that are dynamically woven into the underlying spreadsheet by an aspect weaver. In this aspect-oriented style of spreadsheet development, different users develop, or reuse, aspects without adding intrusive code to the original spreadsheet. Such code is added/executed by the spreadsheet weaving mechanism proposed in this paper.

Polcyn, Michael J., Louis L. Jacobs, Anne S. Schulp, and Octávio Mateus Trolling the Cretaceous Seas: Marine Amniotes of Two West Coast Margins. Geological Society of America Annual Meeting. Geological Society of America Abstracts with Programs. Vol. 47, No. 4, p.55, 2015. Abstract

In this session we review the Upper Cretaceous marine amniote records from the west coasts of North America and Africa. Recent work by our group in Angola, on the west coast of Africa, has opened up new fossiliferous localities, producing well-preserved turtles, plesiosaurs, and mosasaurs, ranging in age from Late Turonian to Late Maastrichtian. These African localities were deposited in arid latitudes and highly productive upwelling zones along the passive margin of a growing South Atlantic Ocean. The fossil record of Cretaceous marine amniotes from the West Coast of North America is relatively meager when compared to the African record and the prolific fossil beds laid down in the epicontinental seas of the Western Interior Seaway and northern Europe. Nonetheless, these localities provide an important glimpse of a marine ecosystem that developed on the active margins of a deep ocean basin. Historically considered to be depauperate and endemic, the west coast fauna was characterized by unusual forms such as Plotosaurus, arguably one of the most derived mosasaurs; however, in recent years, additional taxa have been described, revealing species diversity and ecological partitioning within these communities and in some cases, faunal interchange with other regions. The large quantity of well-preserved fossils from the west coast of Africa is influenced in part by its paleogeographic position, deposited within highly productive areas of Hadley Cell controlled upwelling zones. By contrast, the North American west coast localities have been deposited in temperate and higher latitudes since the Late Cretaceous. Nonetheless, the North American and African faunas share some common characteristics in a possessing a mix of endemic and more cosmopolitan forms. Habitat partitioning reflected in tooth form and body size is comparable between the Angolan and the North American west coast, and there is remarkable convergence in taxa which appear to exploit certain like-niches.

Clemmensen, Lars B., Jesper Milàn, Jan Schulz Adolfssen, Eliza Jarl Estrup, Nicolai Frobøse, Nicole Klein, Octávio Mateus, and Oliver Wings. "The vertebrate-bearing Late Triassic Fleming Fjord Formation of central East Greenland revisited: stratigraphy, palaeoclimate and new palaeontological data." Geological Society, London, Special Publications. 434.1 (2015): 31-47. Abstractclemmensenetal2015greenland.pdfWebsite

In Late Triassic (Norian–Rhaetian) times, the Jameson Land Basin lay at 40° N on the northern part of the supercontinent Pangaea. This position placed the basin in a transition zone between the relatively dry interior of the supercontinent and its more humid periphery. Sedimentation in the Jameson Land Basin took place in a lake–mudflat system and was controlled by orbitally forced variations in precipitation. Vertebrate fossils have consistently been found in these lake deposits (Fleming Fjord Formation), and include fishes, dinosaurs, amphibians, turtles, aetosaurs and pterosaurs. Furthermore, the fauna includes mammaliaform teeth and skeletal material. New vertebrate fossils were found during a joint vertebrate palaeontological and sedimentological expedition to Jameson Land in 2012. These new finds include phytosaurs, a second stem testudinatan specimen and new material of sauropodomorph dinosaurs, including osteologically immature individuals. Phytosaurs are a group of predators common in the Late Triassic, but previously unreported from Greenland. The finding includes well-preserved partial skeletons that show the occurrence of four individuals of three size classes. The new finds support a late Norian–early Rhaetian age for the Fleming Fjord Formation, and add new information on the palaeogeographical and palaeolatitudinal distribution of Late Triassic faunal provinces.

Fliedel, Christophe, Vitor Rosa, Filipa M. Alves, Ana. M. Martins, Teresa Aviles, and Samuel Dagorne. "{P,O-Phosphinophenolate zinc(II) species: synthesis, structure and use in the ring-opening polymerization (ROP) of lactide, epsilon-caprolactone and trimethylene carbonate}." {DALTON TRANSACTIONS}. {44} (2015): {12376-12387}. Abstract

{The P, O-type phosphinophenol proligands (1 center dot H, 2-PPh2-4-Me-6-Me-C6H2OH; 2 center dot H, 2-PPh2-4-Me-6-Bu-t-C6H2OH) readily react with one equiv. of ZnEt2 to afford in high yields the corresponding Zn(II)ethyl dimers of the type {[}(kappa(2)-P, O) Zn-Et](2) (3 and 4) with two mu-O-Ph bridging oxygens connecting the two Zn(II) centers, as determined by X-ray diffraction (XRD) studies in the case of 3. Based on diffusion-ordered NMR spectroscopy (DOSY), both species 3 and 4 retain their dimeric structures in solution. The alcoholysis reaction of Zn(II) alkyls 3 and 4 with BnOH led to the high yield formation of the corresponding Zn(II) benzyloxide species {[}(kappa(2)-P, O) Zn-OBn](2) (5 and 6), isolated in a pure form as colorless solids. The centrosymmetric and dimeric nature of Zn(II) alkoxides 5 and 6 in solution was deduced from DOSY NMR experiments and multinuclear NMR data. Though the heteroleptic species 5 is stable in solution, its analogue 6 is instable in CH2Cl2 solution at room temperature to slowly decompose to the corresponding homoleptic species 8 via the transient formation of (kappa(2)-P, O)(2)Zn-2(mu-OBn)(mu-kappa(1):kappa(1)-P, O) (6'). Crystallization of compound 6 led to crystals of 6', as established by XRD analysis. The reaction of ZnEt2 with two equiv. of 1 center dot H and 2 center dot H allowed access to the corresponding homoleptic species of the type {[}Zn(P, O)(2)] (7 and 8). All gathered data are consistent with compound 7 being a dinuclear species in the solid state and in solution. Data for species 8, which bears a sterically demanding P, O-ligand, are consistent with a mononuclear species in solution. The Zn(II) alkoxide species 5 and the {[}Zn(P, O)(2)]-type compounds 7 and 8 were evaluated as initiators of the ring-opening polymerization (ROP) of lactide (LA), epsilon-caprolactone (epsilon-CL) and trimethylene carbonate (TMC). Species 5 is a well-behaved ROP initiator for the homo-, co- and terpolymerization of all three monomers with the production of narrow disperse materials under living and immortal conditions. Though species 7 and 8 are ROP inactive on their own, they readily polymerize LA in the presence of a nucleophile such as BnOH to produce narrow disperse PLA, presumably via an activated-monomer ROP mechanism.}

Silva, Tiago A. N., M. A. R. Loja, A. Carvalho, Nuno M. M. Maia, and J. I. Barbosa Adaptive Empirical Distributions in the Framework of Inverse Problems (submitted). International Journal of Computational Methods in Engineering Science and Mechanics., 2015. Abstract
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Young, M. T., S. Hua, L. Steel, D. Foffa, S. L. Brusatte, S. Thüring, O. Mateus, J. I. Ruiz-Omeñaca, P. Havlik, Y. Lepage, and M. B. De Andrade. "Addendum to ?Revision of the Late Jurassic teleosaurid genus Machimosaurus (Crocodylomorpha, Thalattosuchia)?" Royal Society Open Science. 2 (2015). Abstract
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Klein, Hendrik, Jesper Milàn, Lars B. Clemmensen, Nicolaj Frobøse, Octávio Mateus, Nicole Klein, Jan S. Adolfssen, Eliza J. Estrup, and Oliver Wings. "Archosaur footprints (cf. Brachychirotherium) with unusual morphology from the Upper Triassic Fleming Fjord Formation (Norian–Rhaetian) of East Greenland." Geological Society, London, Special Publications. 434 (2015). AbstractWebsite

The Ørsted Dal Member of the Upper Triassic Fleming Fjord Formation in East Greenland is well known for its rich vertebrate fauna, represented by numerous specimens of both body and ichnofossils. In particular, the footprints of theropod dinosaurs have been described. Recently, an international expedition discovered several slabs with 100 small chirotheriid pes and manus imprints (pes length 4–4.5 cm) in siliciclastic deposits of this unit. They show strong similarities with Brachychirotherium, a characteristic Upper Triassic ichnogenus with a global distribution. A peculiar feature in the Fleming Fjord specimens is the lack of a fifth digit, even in more deeply impressed imprints. Therefore, the specimens are assigned here tentatively to cf. Brachychirotherium. Possibly, this characteristic is related to the extremely small size and early ontogenetic stage of the trackmaker. The record from Greenland is the first evidence of this morphotype from the Fleming Fjord Formation. Candidate trackmakers are crocodylian stem group archosaurs; however, a distinct correlation with known osteological taxa from this unit is not currently possible. While the occurrence of sauropodomorph plateosaurs in the bone record links the Greenland assemblage more closer to that from the Germanic Basin of central Europe, here the described footprints suggest a Pangaea-wide exchange.Supplementary material: Three-dimensional model of cf. Brachychirotherium pes–manus set (from MGUH 31233b) from the Upper Triassic Fleming Fjord Formation (Norian–Rhaetian) of East Greenland as pdf, ply and jpg files (3D model created by Oliver Wings; photographs taken by Jesper Milàn) is available at https://doi.org/10.6084/m9.figshare.c.2133546

Correia, H. D., J. Marangon, CD Brondino, JJG Moura, MJ Romão, P. J. González, and T. Santos-Silva. "Aromatic aldehydes at the active site of aldehyde oxidoreductase from Desulfovibrio gigas: Reactivity and molecular details of the enzyme-substrate and enzyme-product interaction." Journal of Biological Inorganic Chemistry. 20 (2015): 219-229. Abstract
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Correia, Hugo D., Jacopo Marangon, Carlos D. Brondino, Jose J. G. Moura, Maria J. Romao, Pablo J. Gonzalez, and Teresa Santos-Silva. "Aromatic aldehydes at the active site of aldehyde oxidoreductase from Desulfovibrio gigas: reactivity and molecular details of the enzyme-substrate and enzyme-product interaction (vol 20, pg 219, 2015)." Journal of Biological Inorganic Chemistry. 20 (2015): 231. Abstract
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Fernández-Cabo, J. L., R. Widmann, M. Arce-Blanco, R. Crocetti, J. Xavier, and A. Majano-Majano. "Assessment of wire-frame analysis models of a historical planked timber arch." Proceedings of the Institution of Civil Engineers - Structures and Buildings. 168 (2015): 680-694. AbstractWebsite
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Mendes, Manuel J., Seweryn Morawiec, Tiago Mateus, Andriy Lyubchyk, Hugo Águas, Isabel Ferreira, Elvira Fortunato, Rodrigo Martins, Francesco Priolo, and Isodiana Crupi. "Broadband light trapping in thin film solar cells with self-organized plasmonic nano-colloids." Nanotechnology. 26 (2015): 135202. Abstract
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c c d Mendes, M.J.a b, Morawiec Mateus Lyubchyk Águas Ferreira Fortunato Martins Priolo Crupi S. b T. a. "Broadband light trapping in thin film solar cells with self-organized plasmonic nanocolloids." Nanotechnology. 26 (2015). AbstractWebsite

The intense light scattered from metal nanoparticles sustaining surface plasmons makes them attractive for light trapping in photovoltaic applications. However, a strong resonant response from nanoparticle ensembles can only be obtained if the particles have monodisperse physical properties. Presently, the chemical synthesis of colloidal nanoparticles is the method that produces the highest monodispersion in geometry and material quality, with the added benefits of being low-temperature, low-cost, easily scalable and of allowing control of the surface coverage of the deposited particles. In this paper, novel plasmonic back-reflector structures were developed using spherical gold colloids with appropriate dimensions for pronounced far-field scattering. The plasmonic back reflectors are incorporated in the rear contact of thin film n-i-p nanocrystalline silicon solar cells to boost their photocurrent generation via optical path length enhancement inside the silicon layer. The quantum efficiency spectra of the devices revealed a remarkable broadband enhancement, resulting from both light scattering from the metal nanoparticles and improved light incoupling caused by the hemispherical corrugations at the cells' front surface formed from the deposition of material over the spherically shaped colloids. © 2015 IOP Publishing Ltd.

Echeverria, Coro, Luis E. Aguirre, Esther G. Merino, Pedro L. Almeida, and Maria H. Godinho. "Carbon nanotubes as reinforcement of cellulose liquid crystalline responsive networks." ACS applied materials & interfaces. 7.38 (2015): 21005-21009. Abstract
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Marzola, M., O. Mateus, AS Schulp, LL Jacobs, M. J. Polcyn, V. Pervov, AO Goncalves, and ML Morais. "Comparative anatomy and systematics of Cretaceous mammal tracks of Angola." 13th Annual Meeting of the European Association of Vertebrate Palaeontologists - EAVP 2015. Opole, Poland 2015. Abstract
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Marzola, M., O. Mateus, {Anne S. } Schulp, {Louis L. } Jacobs, {Michael J. } Polcyn, Vladimir Pervov, {A. O. } Goncalves, and {M. L. } Morais. "Comparative anatomy and systematics of Cretaceous mammal tracks of Angola." 2015. 35. Abstract
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Pinto, V. C., Tiago Ramos, Sofia Alves, J. Xavier, Paulo Tavares, P. M. G. P. Moreira, and Rui Miranda Guedes. "Comparative Failure Analysis of PLA, PLA/GNP and PLA/CNT-COOH Biodegradable Nanocomposites thin Films." Procedia Engineering. 114 (2015): 635-642. AbstractWebsite

Abstract Biodegradable polymers such as poly(lactic) acid (PLA) have been studied for biomaterials applications such as natural human ligament replacement, however these materials could be applied to other sectors as aerospace, aeronautics, automotive, food packaging. \{PLA\} presents a relatively brittle with a mode I fracture behavior, being often blend with other biodegradable or non-degradable polymers to improve its fracture energy. For some existing applications, \{PLA\} components exhibit accumulated permanent deformation resulting from dynamic mechanical inputs, resulting on failure by laxity of parts. Aiming the improvement of \{PLA\} mechanical properties, the inclusion of carbon nanofillers into \{PLA\} matrix, in particular, CNT-COOH and \{GNP\} have been developed, due to their strong sp2 carbon-carbon bondings and their geometric arrangement that enhance mechanical properties of the polymer matrix. \{PLA\} and nanocomposites were produced by melt blending followed by compression molding in a hot press, with small weight percentages of nanofillers added to the matrix. Quasi static tensile tests were performed on a mechanical testing machine (Instron™ ElectroPuls E1000) along with failure analysis of specimens with centered crack with digital image correlation, revealing strain distribution along specimens.

Gabriel, A., J. Machado, R. Gomes, J. M. P. Coelho, C. O. Silva, C. P. Reis, J. P. Santos, and P. Vieira. "Concentrated photoactivation: focusing light through scattering." World Congress on Medical Physics and Biomedical Engineering, June 7-12, 2015, Toronto, Canada. Ed. David A. Jaffray. Cham: Springer International Publishing, 2015. 1727-1730. Abstract

Light has long being used in medicine; however, the high scattering of biological tissues always hindered its use. The aim of this work is the development of methodologies to focus light inside biological tissues. Geant4/GAMOS Monte Carlo platform was used to simulate the possibility of parameterize the time delay of multiple sources of external light, offset in time, as a function of the interest region position in order to create constructive interferences in a breast sample. A computational model was implemented and the platform was configured in order to perform these simulations. Preliminary results using a single light source were performed. It was concluded that scattering in adipose tissue is very high which is consistent with previous studies.

Seixas, Joao D., Marino F. A. Santos, Abhik Mukhopadhyay, Ana C. Coelho, Patricia M. Reis, Luis F. Veiros, Ana R. Marques, Nuno Penacho, Ana M. L. Goncalves, Maria J. Romao, Goncalo J. L. Bernardes, Teresa Santos-Silva, and Carlos C. Romao. "A contribution to the rational design of Ru(CO)(3)Cl2L complexes for in vivo delivery of CO." Dalton Transactions. 44 (2015): 5058-5075. Abstract
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Hansen, Bitten Bolvig, Jesper Milàn, Lars B. Clemmensen, Jan Schulz Adolfssen, Eliza Jarl Estrup, Nicole Klein, Octávio Mateus, and Oliver Wings. "Coprolites from the Late Triassic Kap Stewart Formation, Jameson Land, East Greenland: morphology, classification and prey inclusions." Geological Society, London, Special Publications. 434 (2015). AbstractWebsite

A large collection of vertebrate coprolites from black lacustrine shales in the Late Triassic (Rhaetian–Sinemurian) Kap Stewart Formation, East Greenland is examined with regard to internal and external morphology, prey inclusions, and possible relationships to the contemporary vertebrate fauna. A number of the coprolites were mineralogically examined by X-ray diffraction (XRD), showing the primary mineral composition to be apatite, clay minerals, carbonates and, occasionally, quartz in the form of secondary mineral grains. The coprolite assemblage shows multiple sizes and morphotypes of coprolites, and different types of prey inclusions, demonstrating that the coprolite assemblage originates from a variety of different producers.Supplementary material: A description of the size, shape, structure, texture, contents and preservation of the 328 specimens is available at https://doi.org/10.6084/m9.figshare.c.2134335

Soares, R. S., R. C. C. Monteiro, M. M. R. A. Lima, and R. J. C. Silva. "Crystallization of lithium disilicate-based multicomponent glasses–effect of silica/lithia ratio." Ceramics International. 41 (2015): 317-324. Abstract
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Xavier, J., M. Oliveira, J. J. L. Morais, and M. F. S. F. de Moura. "Determining mode I cohesive law of Pinus pinaster by coupling double cantilever beam test with digital image correlation." Fracture and Structural Integrity. 31 (2015): 13-22. AbstractWebsite

The direct identification of the cohesive law in pure mode I of Pinus pinaster is addressed. The approach couples the double cantilever beam (DCB) test with digital image correlation (DIC). Wooden beam specimens loaded in the radial-longitudinal (RL) fracture propagation system are used. The strain energy release rate in mode I (GI ) is uniquely determined from the load-displacement ( P ?? ) curve by means of the compliance-based beam method (CBBM). This method relies on the concept of equivalent elastic crack length ( eq a ) and therefore does not require the monitoring of crack propagation during test. The crack tip opening displacement in mode I ? ? I w is determined from the displacement field at the initial crack tip. The cohesive law in mode I I I (? ? w ) is then identified by numerical differentiation of the I I G ? w relationship. Moreover, the proposed procedure is validated by finite element analyses including cohesive zone modelling. It is concluded that the proposed data reduction scheme is adequate for assessing the cohesive law in pure mode I of P. pinaster.