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2020
Couto, Paula, Maria João Falcão Silva, Manuel Baião, and Fernando Pinho. "Tecnologias e custos em intervenções de reabilitação: Aplicação a edifícios escolares." ENCORE2020 - 4º Encontro sobre Conservação e Reabilitação de Edifícios. ISBN 978-972-49-2313-0. LNEC. Lisboa 2020.
Couto, Paula, Maria João Falcão Silva, and Fernando Pinho. "Contributos para um CICS nacional: Tabelas de produtos, de propriedades, de formas de informação, de gestão e direção de Projeto e de elementos." 3º Congresso Português de Building Information Modelling. ISBN 978-972-752-272-9. FEUP. Porto 2020.
Silva, Sara, Maria João Falcão, Paula Couto, and Fernando Pinho. "BIM methodology in energetic rehabilitation of buildings: application to a public research laboratory." REHABEND 2020 - Euro-American Congress on Construction Pathology, Rehabilitation Technology and Heritage Management. ISBN: 978-84-09-17873-5. University of Cantabria, Spain 2020.
Lopes, João, Maria João Falcão Silva, Paula Couto, and Fernando Pinho. "BIM methodology to support the functional rehabilitation of a building." REHABEND 2020 - Euro-American Congress on Construction Pathology, Rehabilitation Technology and Heritage Management. ISBN: 978-84-09-17873-5. University of Cantabria, Spain 2020.
Neto, Tiago, Paula Couto, Maria João Falcão Silva, and Fernando Pinho. "Costs and technologies in school buildings rehabilitation works." REHABEND 2020 - Euro-American Congress on Construction Pathology, Rehabilitation Technology and Heritage Management. ISBN: 978-84-09-17873-5. University of Cantabria, Spain 2020.
Barcelos, João, Maria João Falcão Silva, Paula Couto, and Fernando Pinho. "Multicriteria analysis to support decision in public buildings rehabilitation interventions." REHABEND 2020 - Euro-American Congress on Construction Pathology, Rehabilitation Technology and Heritage Management. ISBN: 978-84-09-17873-5. University of Cantabria, Spain 2020.
Perdigão, Patrícia, Bruno Miguel Morais Faustino, Jaime Faria, João Paulo Canejo, João Paulo Borges, Isabel Ferreira, and Ana Catarina Baptista. "Conductive Electrospun Polyaniline/Polyvinylpyrrolidone Nanofibers: Electrical and Morphological Characterization of New Yarns for Electronic Textiles." 8.4 (2020): 24. Abstract
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Carreira, Cíntia, Rute F. Nunes, Olga Mestre, Isabel Moura, and Sofia R. Pauleta. "The effect of pH on Marinobacter hydrocarbonoclasticus denitrification pathway and nitrous oxide reductase." 25.7 (2020): 927-940. AbstractWebsite

Increasing atmospheric concentration of N2O has been a concern, as it is a potent greenhouse gas and promotes ozone layer destruction. In the N-cycle, release of N2O is boosted upon a drop of pH in the environment. Here, Marinobacter hydrocarbonoclasticus was grown in batch mode in the presence of nitrate, to study the effect of pH in the denitrification pathway by gene expression profiling, quantification of nitrate and nitrite, and evaluating the ability of whole cells to reduce NO and N2O. At pH 6.5, accumulation of nitrite in the medium occurs and the cells were unable to reduce N2O. In addition, the biochemical properties of N2O reductase isolated from cells grown at pH 6.5, 7.5 and 8.5 were compared for the first time. The amount of this enzyme at acidic pH was lower than that at pH 7.5 and 8.5, pinpointing to a post-transcriptional regulation, though pH did not affect gene expression of N2O reductase accessory genes. N2O reductase isolated from cells grown at pH 6.5 has its catalytic center mainly as CuZ(4Cu1S), while that from cells grown at pH 7.5 or 8.5 has it as CuZ(4Cu2S). This study evidences that an in vivo secondary level of regulation is required to maintain N2O reductase in an active state.

dos Santos, Raquel, Inês Iria, Ana M. Manuel, Ana P. Leandro, Catarina A. C. Madeira, Joao Goncalves, Ana Luísa Carvalho, and Ana Cecília Roque. "Magnetic Precipitation: A New Platform for Protein Purification." Biotechnology JournalBiotechnology Journal. n/a.n/a (2020): 2000151. AbstractWebsite

One of the trends in downstream processing comprises the use of ?anything-but-chromatography? methods to overcome the current downfalls of standard packed-bed chromatography. Precipitation and magnetic separation are two techniques already proven to accomplish protein purification from complex media, yet never used in synergy. With the aim to capture antibodies directly from crude extracts, a new approach combining precipitation and magnetic separation was developed and named as affinity magnetic precipitation. A precipitation screening, based on the Hofmeister series, and a commercial precipitation kit were tested with affinity magnetic particles to assess the best condition for antibody capture from human serum plasma and clarified cell supernatant. The best conditions were obtained when using PEG3350 as precipitant at 4°C for 1h, reaching 80% purity and 50% recovery of polyclonal antibodies from plasma, and 99% purity with 97% recovery yield of anti-TNFα mAb from cell supernatants. These results show that the synergetic use of precipitation and magnetic separation can represent an alternative for the efficient capture of antibodies. This article is protected by copyright. All rights reserved

Teixeira, L. R., C. M. Cordas, M. P. Fonseca, N. E. C. Duke, P. R. Pokkuluri, and C. A. Salgueiro. "Modulation of the Redox Potential and Electron/Proton Transfer Mechanisms in the Outer Membrane Cytochrome OmcF From Geobacter sulfurreducens." Frontiers in Microbiology. 10 (2020). AbstractWebsite
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Carreira, Cíntia, Margarida M. C. dos Santos, Sofia R. Pauleta, and Isabel Moura. "Proton-coupled electron transfer mechanisms of the copper centres of nitrous oxide reductase from Marinobacter hydrocarbonoclasticus – An electrochemical study." 133 (2020): 107483. AbstractWebsite

Reduction of N2O to N2 is catalysed by nitrous oxide reductase in the last step of the denitrification pathway. This multicopper enzyme has an electron transferring centre, CuA, and a tetranuclear copper-sulfide catalytic centre, “CuZ”, which exists as CuZ*(4Cu1S) or CuZ(4Cu2S). The redox behaviour of these metal centres in Marinobacter hydrocarbonoclasticus nitrous oxide reductase was investigated by potentiometry and for the first time by direct electrochemistry. The reduction potential of CuA and CuZ(4Cu2S) was estimated by potentiometry to be +275 ± 5 mV and +65 ± 5 mV vs SHE, respectively, at pH 7.6. A proton-coupled electron transfer mechanism governs CuZ(4Cu2S) reduction potential, due to the protonation/deprotonation of Lys397 with a pKox of 6.0 ± 0.1 and a pKred of 9.2 ± 0.1. The reduction potential of CuA, in enzyme samples with CuZ*(4Cu1S), is controlled by protonation of the coordinating histidine residues in a two-proton coupled electron transfer process. In the cyclic voltammograms, two redox pairs were identified corresponding to CuA and CuZ(4Cu2S), with no additional signals being detected that could be attributed to CuZ*(4Cu1S). However, an enhanced cathodic signal for the activated enzyme was observed under turnover conditions, which is explained by the binding of nitrous oxide to CuZ0(4Cu1S), an intermediate species in the catalytic cycle.

Gomes, Ana Sara, Helena Ramos, Sara Gomes, Joana B. Loureiro, Joana Soares, Valentina Barcherini, Paola Monti, Gilberto Fronza, Carla Oliveira, Lucília Domingues, Margarida Bastos, Daniel F. A. R. Dourado, Ana Luísa Carvalho, Maria João Romão, Benedita Pinheiro, Filipa Marcelo, Alexandra Carvalho, Maria M. M. Santos, and Lucília Saraiva. "SLMP53-1 interacts with wild-type and mutant p53 DNA-binding domain and reactivates multiple hotspot mutations." 1864.1 (2020): 129440. AbstractWebsite

BackgroundHalf of human cancers harbour TP53 mutations that render p53 inactive as a tumor suppressor. As such, reactivation of mutant (mut)p53 through restoration of wild-type (wt)-like function represents one of the most promising therapeutic strategies in cancer treatment. Recently, we have reported the (S)-tryptophanol-derived oxazoloisoindolinone SLMP53-1 as a new reactivator of wt and mutp53 R280K with in vitro and in vivo p53-dependent antitumor activity. The present work aimed a mechanistic elucidation of mutp53 reactivation by SLMP53-1.
Methods and results
By cellular thermal shift assay (CETSA), it is shown that SLMP53-1 induces wt and mutp53 R280K thermal stabilization, which is indicative of intermolecular interactions with these proteins. Accordingly, in silico studies of wt and mutp53 R280K DNA-binding domain with SLMP53-1 unveiled that the compound binds at the interface of the p53 homodimer with the DNA minor groove. Additionally, using yeast and p53-null tumor cells ectopically expressing distinct highly prevalent mutp53, the ability of SLMP53-1 to reactivate multiple mutp53 is evidenced.
Conclusions
SLMP53-1 is a p53-activating agent with the ability to directly target wt and a set of hotspot mutp53.
General Significance
This work reinforces the encouraging application of SLMP53-1 in the personalized treatment of cancer patients harboring distinct p53 status.

Pauleta, Sofia R., Marta S. P. Carepo, and Isabel Moura. "Transition Metals and Sulfur – A Strong Relationship for Life5. The Tetranuclear Copper-Sulfide Center of Nitrous Oxide Reductase." Eds. Martha Sosa Torres, and Peter Kroneck. De Gruyter, 2020. 139-164. Abstract
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Park, Jin-Young, Yuong-Nam Lee, Philip J. Currie, Yoshitsugu Kobayashi, Eva Koppelhus, Rinchen Barsbold, Octávio Mateus, Sungjin Lee, and Su-Hwan Kim. "Additional skulls of Talarurus plicatospineus (Dinosauria: Ankylosauridae) and implications for paleobiogeography and paleoecology of armored dinosaurs." Cretaceous Research. 108 (2020): 104340. Abstractpark_et_al_2020_additional_skulls_of_talarurus_plicatospineus_dinosauria_final.pdfWebsite

Three new additional skull specimens of Talarurus plicatospineus have been recovered from the Upper Cretaceous (Cenomanian–Santonian) Bayanshiree Formation, of Bayan Shiree cliffs, eastern Gobi Desert, Mongolia. The skulls feature unique characters such as an anteriorly protruded single internarial caputegulum, around 20 flat or concave nasal-area caputegulae surrounded by a wide sulcus, a vertically oriented elongate loreal caputegulum with a pitted surface, an elongate lacrimal caputegulum positioned above the posterodorsal border of the maxilla, two longitudinally arranged large frontoparietal caputegulae surrounded by smaller rhomboid caputegulae, small but elongate medial supraorbital caputegulae, a posterior supraorbital caputegulum that is four times larger than the anterior one, up to three transverse parallel grooves on the dorsal surface of the posterior supraorbital caputegulum, postocular caputegulae along the ventral to posterior rim of the orbit that extend almost to the anteroventral margin of the squamosal horn, a longitudinal furrow tapering towards the apex of the squamosal horn, a lateral nuchal caputegulum four to five times larger than other nuchal caputegulae, and a pterygovomerine keel with a ventral margin that is dorsally positioned to the alveolar ridge. The phylogenetic analysis result showed that Talarurus is sister to the clade that includes the derived Asian ankylosaurines (Saichania chulsanensis, Tarchia kielanae, and Zaraapelta nomadis). It also shows that there was dispersal of ankylosaurines from Asia into western North America before the Cenomanian. Moreover, the rostral differences between Talarurus and Tsagantegia, another ankylosaur from the same formation, suggest possible niche partitioning between these taxa.

Cabrita, M. R., and S. Duarte. "Addressing Sustainability and Industry 4.0 to the Business Model." Strategies for Business Sustainability in a Collaborative Economy. IGI Global, 2020. 178-198.
Casimiro, Ana, and Eduardo Skapinakis. "Basis reduction for cryptogroups and orthogroups." Semigroup Forum (2020).
Raposo, C. D., R. Costa, K. T. Petrova, C. Brito, M. T. Scotti, and M. M. Cardoso. "Development of Novel Galactosylated PLGA Nanoparticles for Hepatocyte Targeting Using Molecular Modelling." Polymers. 12.1 (2020): 94-112. DOI:10.3390/polym12010094.
Onofre, Ana, Radu Godina, Helena Carvalho, and Isabel Catarino. "Eco-innovation in the Cleaning Process: An Application of Dry Ice Blasting in Automotive Industry." Journal of Cleaner Production . 272 (2020).
Baltazar, Luis G., Fernando MA Henriques, and Maria Teresa Cidade. "Effects of Polypropylene Fibers and Measurement Methods on the Yield Stress of Grouts for the Consolidation of Heritage Masonry Walls." Fluids . 5.2 (2020): 53.
Carreira, Paulo, Vasco Amaral, and Hans Vangheluwe Foundations of Multi-Paradigm Modelling for Cyber-Physical Systems. Springer, 2020.
Tekinerdogan, Bedir, Dominique Blouin, Hans Vangheluwe, Miguel Goulão, Paulo Carreira, and Vasco Amaral Multi-Paradigm Modelling Approaches for Cyber-Physical Systems. Elsevier, 2020.
Baptista, Ricardo, Mafalda Guedes, M. F. C. Pereira, A. Maurício, Henrique Nuno Carrêlo, and Maria Teresa Cidade. "On the effect of design and fabrication parameters on mechanical performance of 3D printed PLA scaffolds." Bioprinting . 20. e00096 (2020).
Brás, C. P., and A. L. Custódio. "On the use of polynomial models in multiobjective directional direct search." Computational Optimization and Applications. 77 (2020): 897-918. AbstractWebsite

Polynomial interpolation or regression models are an important tool in Derivativefree Optimization, acting as surrogates of the real function. In this work, we propose the use of these models in the multiobjective framework of directional direct search, namely the one of Direct Multisearch. Previously evaluated points are used to build quadratic polynomial models, which are minimized in an attempt of generating nondominated points of the true function, defining a search step for the algorithm. Numerical results state the competitiveness of the proposed approach.

Petrova, K. T., I. C. F. R. Ferreira, R. C. Calhelha, and M. Sokovic "Phenylpropanoid Saccharide Esters, Methods and Uses Thereof." WO/2020/183442., 2020.
García-Morales, Moisés, Samuel D. Fernández-Silva, Claudia Roman, Marius A. Olariu, Maria T. Cidade, and Miguel A. Delgado. "Preliminary Insights into Electro-Sensitive Ecolubricants: A Comparative Analysis Based on Nanocelluloses and Nanosilicates in Castor Oil." Processes . 8.9 (2020): 1060.