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2011
Hollander, Yoav, Alan Hu, João Louren{\c c}o, and Ronny Morad. "Special Session on Debugging." Hardware and Software: Verification and Testing. Eds. Sharon Barner, Ian Harris, Daniel Kroening, and Orna Raz. Vol. 6504. Lecture Notes in Computer Science, 6504. Springer Berlin / Heidelberg, 2011. 24-28. Abstract
In software, hardware, and embedded system domains, debugging is the process of locating and correcting faults in a system. Depending on the context, the various characteristics of debugging induce different challenges and solutions. Post-silicon hardware debugging, for example, needs to address issues such as limited visibility and controllability, while debugging software entails other issues, such as the handling of distributed or non-deterministic computation. The challenges that accompany such issues are the focus of many current research efforts. Solutions for debugging range from interactive tools to highly analytic techniques. We have seen great advances in debugging technologies in recent years, but bugs continue to occur, and debugging still encompasses significant portions of the life-cycles of many systems. The session covered state-of-the-art approaches as well as promising new research directions in both the hardware and software domains.
Bras, Joana L. A., Alan Cartmell, Ana Lusia M. Carvalho, Genny Verze, Edward A. Bayer, Yael Vazana, Marcia A. S. Correia, Jose A. M. Prates, Supriya Ratnaparkhe, Alisdair B. Boraston, Maria J. Romao, Carlos M. G. A. Fontes, and Harry J. Gilbert. "Structural insights into a unique cellulase fold and mechanism of cellulose hydrolysis (vol 108, pg 5237, 2011)." Proceedings of the National Academy of Sciences of the United States of America. 108 (2011): 8525. Abstract
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Barbosa, Paulo E. S., João Paulo Barros, Franklin Ramalho, Lu{\'ı}s Gomes, Jorge Figueiredo, Filipe Moutinho, Anikó Costa, and André Aranha. "SysVeritas: {A} Framework for Verifying {IOPT} Nets and Execution Semantics within Embedded Systems Design." Technological Innovation for Sustainability - Second {IFIP} {WG} 5.5/SOCOLNET Doctoral Conference on Computing, Electrical and Industrial Systems, DoCEIS 2011, Costa de Caparica, Portugal, February 21-23, 2011. Proceedings. 2011. 256-265. Abstract
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Baptista, AC, JI Martins, E. Fortunato, R. Martins, J. P. Borges, and I. Ferreira. "Thin and flexible bio-batteries made of electrospun cellulose-based membranes." Biosensors and Bioelectronics. 26.5 (2011): 2742-2745. Abstract
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Baptista, A.C.a, Martins Fortunato Martins Borges Ferreira J. I. b E. "Thin and flexible bio-batteries made of electrospun cellulose-based membranes." Biosensors and Bioelectronics. 26 (2011): 2742-2745. AbstractWebsite

The present work proposes the development of a bio-battery composed by an ultrathin monolithic structure of an electrospun cellulose acetate membrane, over which was deposited metallic thin film electrodes by thermal evaporation on both surfaces. The electrochemical characterization of the bio-batteries was performed under simulated body fluids like sweat and blood plasma [salt solution - 0.9% (w/w) NaCl]. Reversible electrochemical reactions were detected through the cellulose acetate structure. Thus, a stable electrochemical behavior was achieved for a bio-battery with silver and aluminum thin films as electrodes. This device exhibits the ability to supply a power density higher than 3μWcm-2.Finally, a bio-battery prototype was tested on a sweated skin, demonstrating the potential of applicability of this bio-device as a micropower source. © 2010 Elsevier B.V.

Santos-Silva, T., A. Mukhopadhyay, J. D. Seixas, G. J. L. Bernardes, C. C. Romão, and MJ Romão. "Towards improved therapeutic CORMs: Understanding the reactivity of CORM-3 with proteins." Current Medicinal Chemistry. 18 (2011): 3361-3366. Abstract
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Tillak, JB, I. Bernacka-Wojcik, D. Barata, PAS Jorge, H. Águas, and AG Oliva. "Towards single cell spectroscopy and refractometry in microfluidic chip platforms." International Conference on Applications of Optics and Photonics. International Society for Optics and Photonics, 2011. 800112. Abstract
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Louren{\c c}o, João. "Understanding Transactional Memory (Extended Abstract)." Hardware and Software: Verification and Testing. Eds. Sharon Barner, Ian Harris, Daniel Kroening, and Orna Raz. Vol. 6504. Lecture Notes in Computer Science, 6504. Springer Berlin / Heidelberg, 2011. 1-2. Abstract
Transactional Memory [3] (TM) is a new paradigm for concurrency control that brings the concept of transactions, widely known from the Databases community, into the management of data located in main memory. TM delivers a powerful semantics for constraining concurrency and provides the means for the extensive use of the available parallel hardware. TM uses abstractions that promise to ease the development of scalable parallel applications by achieving performances close to fine-grained locking while maintaining the simplicity of coarse-grained locking.
Trindade, AC, João P. Canejo, LFV Pinto, P. Patrício, P. Brogueira, Paulo Ivo Cortez Teixeira, and M. H. Godinho. "Wrinkling labyrinth patterns on elastomeric janus particles." Macromolecules. 44.7 (2011): 2220-2228. Abstract
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Poettner, W., L. Wolf, J. Cecílio, P. Furtado, R. M. Silva, Jorge Sá Silva, Alberto Cardoso, J. Brown, C. Sreenan, A. Klein, U. Roedig, V. Vassiliou, T. Voigt, T. O. Donovan, Z. He, Z. Zinonos, and P. Gil. "WSN Evaluation in Industrial Environments First results and lessons learned." DCOSS. n/a 2011. Abstract
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Bundaleski, N., B. J. Shaw, G. a Silva, M. C. a Moutinho, and O. M. N. D. Teodoro. "{Novel approach to the semi-empirical universal theory for secondary electron yield.}." Scanning. 33 (2011): 266-9. AbstractWebsite

The universal semi-empirical equation has been commonly used to quantitatively describe the energy dependence of the secondary electron yield (SEY). It is even used as a first reliability test for experimental data. The equation is based on the assumption that the stopping power is constant along the electron trajectory. In this article, we derive a novel analytical expression based on a more advanced model which considers linear stopping power dependence on penetration depth. Although coinciding with the universal equation at low energies, the novel function has lower intensity in the higher energy range. The models were compared with experimental SEY data of different metals, taken from literature, as well as freshly cleaved highly oriented pyrolytic graphite, measured in the frame of this work. It is confirmed that the novel expression better describes the experimental data.

Branquinho, Rita, Bruno Veigas, Joana V. Pinto, Rodrigo Martins, Elvira Fortunato, and Pedro V. Baptista. "{Real-time monitoring of PCR amplification of proto-oncogene c-MYC using a Ta2O5 electrolyte-insulator-semiconductor sensor}." Biosensors and Bioelectronics. 28 (2011): 44-49. AbstractWebsite

We present a new approach for real-time monitoring of PCR amplification of a specific sequence from the human c-MYC proto-oncogene using a Ta 2O 5 electrolyte-insulator-semiconductor (EIS) sensor. The response of the fabricated EIS sensor to cycle DNA amplification was evaluated and compared to standard SYBR-green fluorescence incorporation, showing it was possible to detect DNA concentration variations with 30mV/??M sensitivity. The sensor's response was then optimized to follow in real-time the PCR amplification of c-MYC sequence from a genomic DNA sample attaining an amplification profile comparable to that of a standard real-time PCR. Owing to the small size, ease of fabrication and low-cost, the developed Ta 2O 5 sensor may be incorporated onto a microfluidic device and then used for real-time PCR. Our approach may circumvent the practical and economical obstacles posed by current platforms that require an external fluorescence detector difficult to miniaturize and incorporate into a lab-on-chip system. ?? 2011 Elsevier B.V.

Gawande, Manoj B., Paula S. Branco, Kalpesh Parghi, Janhavi J. Shrikhande, Rajesh Kumar Pandey, C. a. a. Ghumman, N. Bundaleski, O. M. N. D. Teodoro, and Radha V. Jayaram. "{Synthesis and characterization of versatile MgO–ZrO2 mixed metal oxide nanoparticles and their applications}." Catalysis Science & Technology. 1 (2011): 1653. AbstractWebsite

A heterogeneous, versatile nano-magnesia-zirconia or MgO–ZrO2 (MZ) catalyst was prepared by an ultra dilution method. The as-synthesised catalyst was characterized by several analytical techniques such as XRD, particle size analysis, BET surface area, thermogravimetric analysis (TGA), differential thermal analysis (DTA), FT-IR spectroscopy, SEM (scanning electron microscope), TEM (transmission electron microscope) and XPS (X-ray fluorescence spectroscopy). The surface area is found to be 268 m2 g1. The catalytic activity of MZ was tested for various important organic reactions such as cross-aldol condensation, N-benzyloxycarbonylation of amines, reduction of aromatic nitrocompounds, and synthesis of 1,5-benzodiazepines. It has been observed that for all reactions MZ shows a good catalytic activity. All corresponding products were obtained in good to excellent yield under mild conditions. The MgO-ZrO2 catalyst can be prepared from inexpensive precursors, has high surface area, and is reusable and recyclable for all reactions. Introduction In heterogeneous catalysis, mixed metal oxides (MMOs) play a

2010
Olziersky, Antonis, Pedro Barquinha, Anna Vila, Luis Pereira, Goncalo Goncalves, Elvira Fortunato, Rodrigo Martins, and Juan R. Morante. "Insight on the SU-8 resist as passivation layer for transparent Ga2O3-In2O3-ZnO thin-film transistors." Journal of Applied Physics. 108 (2010). AbstractWebsite
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Afonso, J., I. Catarino, D. Martins, J. Ricardo, R. Patricio, L. Duband, and G. Bonfait. "Energy storage unit: Solid state demonstrators at 20K and 6K." Cryogenics. 50 (2010): 522-528. Abstract

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Martins, R. M. S., N. Schell, H. Reuther, L. Pereira, K. K. Mahesh, R. J. C. Silva, and F. M. Braz Fernandes. "Texture development, microstructure and phase transformation characteristics of sputtered Ni-Ti Shape Memory Alloy films grown on TiN < 111 >." Thin Solid Films. 519.1 (2010): 122-128. Abstract
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Barquinha, Pedro, Luis Pereira, Goncalo Goncalves, Danjela Kuscer, Marija Kosec, Anna Vila, Antonis Olziersky, Juan Ramon Morante, Rodrigo Martins, and Elvira Fortunato. "Low-temperature sputtered mixtures of high-kappa and high bandgap dielectrics for GIZO TFTs." Journal of the Society for Information Display. 18 (2010): 762-772. AbstractWebsite
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Nayak, Pradipta K., Tito Busani, Elangovan Elamurugu, Pedro Barquinha, Rodrigo Martins, Yongtaek Hong, and Elvira Fortunato. "Zinc concentration dependence study of solution processed amorphous indium gallium zinc oxide thin film transistors using high-k dielectric." Applied Physics Letters. 97 (2010). AbstractWebsite
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Fortunato, Elvira, Vitor Figueiredo, Pedro Barquinha, Elangovan Elamurugu, Raquel Barros, Goncalo Goncalves, Sang-Hee Ko Park, Chi-Sun Hwang, and Rodrigo Martins. "Thin-film transistors based on p-type Cu2O thin films produced at room temperature." Applied Physics Letters. 96 (2010). AbstractWebsite
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Martins, R. M. S., N. Schell, J. von Borany, K. K. Mahesh, R. J. C. Silva, and F. M. Braz Fernandes. "Structural evolution of magnetron sputtered shape memory alloy Ni-Ti films." Vacuum. 84.7 (2010): 913-919. Abstract
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Barbosa, Paulo E. S., Anikó Costa, Lu\'ıs Gomes, Franklin Ramalho, Jorge Figueiredo, and Antônio Junior. "{A MDA-based Contribution for Integrating Web Services within Embedded System's Design}." 8{\textsuperscript{th}} IEEE International Conference on Industrial Informatics (INDIN 2010). 2010. Abstract
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Fortunato, Elvira, Vitor Figueiredo, Pedro Barquinha, Elangovan Elamurugu, Raquel Barros, Goncalo Goncalves, Sang-Hee Ko Park, Chi-Sun Hwang, and Rodrigo Martins. "Thin-film transistors based on p-type Cu2O thin films produced at room temperature (vol 96, 192102, 2010)." Applied Physics Letters. 96 (2010). AbstractWebsite
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Botas, Jose D., Alexandre Velhinho, and Rui JC Silva. "A theoretical approach to the elastic behaviour of compact and hollow spherical particles reinforced metal-matrix composites." International Journal of Materials Research. 101.6 (2010): 752-757. Abstract
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Bonifácio, Paulo Seguidor fotovoltaico: uma variação do P&O - Simulação e Prototipagem. Eds. Stanimir Valtchev. FCT-UNL, 2010. Abstract
This dissertation tries to track the route of power production from photovoltaic sources. A worldwide look into the photovoltaic solar power production is given. The theory behind the PV cell and its application in PV power modules is presented. The DC ? DC power converters usually associated with solar PV panels are showed. The main maximum power point tracking (MPPT) algorithms are also showed. A solar PV system was dimensioned using the theoretical models and the solar PV modules (BS ? 40) available at the Departamento de Engenharia Electrotécnica (DEE). This system was used as a reference for designing a simulator implemented in MatLab?Simulink. This simulator includes all the components needed to test the different MPP tracking algorithms. Those components are: A PV solar module, which can be associated with others to form a solar panel; A Flyback DC ? DC power converter and a classic perturb and observe (P&O) tracking algorithm. A solar power meter that gives values in W?m2 was built in order to validate simulation values of the solar PV modules. Measuring the solar module characteristics (tension ? current) and knowing the solar irradiation at that given time it is possible to check if the simulated values and the measured ones agree. With the data collected in the simulation a new MPP tracking algorithm was presented. This is based in the classic P&O algorithm, but using modules that try to overcome the local maxima problem. It also tries to minimize the control oscillations in the converter?inverter, this is done in order to minimize losses and to maximize power production.
Figueiredo, Elin, Rui JC Silva, Joao C. Senna-Martinez, Fatima M. Araujo, Francisco M. BRAZ FERNANDES, and Joao L. Ines Vaz. "Smelting and recycling evidences from the Late Bronze Age habitat site of Baioes (Viseu, Portugal)." Journal of Archaeological Science. 37.7 (2010): 1623-1634. Abstract
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