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2007
André, J. M., V. H. Fernandes, and J. D. Mitchell. "Largest 2-generated subsemigroups of the symmetric inverse semigroup." Proc. Edinb. Math. Soc. (2). 50 (2007): 551-561.Website
Pina, João, Mário Neves, Alfredo Álvarez, and Amadeu Rodrigues. "Magnetisation System and Thrust Force Measurement of an All Superconducting Linear Synchronous Motor." X Portuguese-Spanish Congress in Electrical Engineering. 2007. Abstract
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Ferreira, AJ, PL Almeida, I. Costa, P. Brogueira, and M. H. Godinho. "Mechanically activated cholesteric polymer dispersed liquid crystals." Liquid Crystals. 34.11 (2007): 1269-1273. Abstract
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Araújo, João, and Janusz Konieczny. "A method of finding automorphism groups of endomorphism monoids of relational systems." Discrete Math.. 307 (2007): 1609-1620. AbstractWebsite
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Vicente da Silva, M., and A. N. Antão. "A non-linear programming method approach for upper bound limit analysis." International Journal for Numerical Methods in Engineering. 72 (2007): 1192-1218. AbstractWebsite

This paper presents a finite element model based on mathematical non-linear programming in order to determine upper bounds of colapse loads of a mechanical structure.The proposed formulation is derived within a kinematical approach framework, employing two simultaneous and independent field approximations for the velocity and strain rate fields. The augmented Lagrangian is used to establish the compatibility between these two fields. In this model, only continuous velocity fields are used.Uzawa's minimization algorithm is applied to determine the optimal kinematical field that minimizes the difference between external and dissipated work rate. The use of this technique allows to bypass the complexity of the non-linear aspects of the problem, since non-linearity is addressed as a set of small local subproblems of optimization for each finite element.The obtained model is quite versatile and suitable for solving a wide range of collapse problems. This paper studies 3D strut-and-tie structures, 2D plane strain/stress and 3D solid problems.

{Vicente da Silva}, M., and A. N. Antão. "A non-linear programming method approach for upper bound limit analysis." International Journal for Numerical Methods in Engineering. 72 (2007): 1192-1218. Abstract
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Xavier, J., S. Avril, F. Pierron, and J. Morais. "Novel experimental approach for longitudinal-radial stiffness characterisation of clear wood by a single test." Holzforschung. 61 (2007): 573-581. Abstract
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{Vicente da Silva}, M., A. Antão, and N. Guerra. "Numerical implementation of the kinematical theorem: Application to the determination of {3D} passive earth pressures of cohesionless soils." IX Internatinal Conference on Computational Plasticity (COMPLAS). Eds. E. Oñate, and D. R. J. Owen. Barcelona 2007. Abstract
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Prabakaran, R., T. Monteiro, M. Peres, A. S. Viana, AF Da Cunha, H. Águas, A. Gonçalves, E. Fortunato, R. Martins, and I. Ferreira. "Optical and structural analysis of porous silicon coated with GZO films using rf magnetron sputtering." Thin Solid Films. 515.24 (2007): 8664-8669. Abstract
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Prabakaran, R., T. Monteiro, M. Peres, A. S. Viana, AF Da Cunha, H. Águas, A. Gonçalves, E. Fortunato, R. Martins, and I. Ferreira. "Optical and structural analysis of porous silicon coated with GZO films using rf magnetron sputtering." Thin Solid Films. 515 (2007): 8664-8669. Abstract
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Gaspar, A., O. Mateus, and F. Almada. "Os argumentos criacionistas em face da evidência científica." Evolução e Criacionismo: Uma Relação Impossível. Lisboa 2007. 197-237. Abstract
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Albarran, T., Lopes Cabeça Martins Mourão L. J. R. "Preliminary budget methodology for reverse engineering applications using laser scanning." Proceedings of the 3rd International Conference on Advanced Research in Virtual and Rapid Prototyping: Virtual and Rapid Manufacturing Advanced Research Virtual and Rapid Prototyping. 2007. 231-235. Abstract

The driving force behind the work herein presented is the importance of budgeting in a competitive market. The problem at hands is the creation of a budgeting methodology for reverse engineering applications, involving laser scanning, that has the ability to generate budgets for different customer accuracy requirements and for parts of different morphologic characteristics, such as: shape, dimension and/or detail complexity. A breakup approach was used to implement the methodology: the reverse engineering process was broken in nine basic identified steps and elementary sources of cost were defined at the different reverse engineering stages as well. Particular budgeting methodologies for each step of the process were created. The obtained results so far point to the possibility of creating a complete budgeting system based on the proposed methodology. © 2008 Taylor & Francis Group.

Alferes, {José Júlio}, and Ricardo Amador. "r3- A foundational ontology for reactive rules." On the Move to Meaningful Internet Systems 2007: CoopIS, DOA, ODBASE, GADA, and IS - OTM Confederated International Conferences CoopIS, DOA, ODBASE, GADA, and IS 2007, Proceedings. PART 1 ed. Vol. 4803 LNCS. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), 4803 LNCS. 2007. 933-952. Abstract
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Alves, A., AJL Phillips, I. Henriques, and A. Correia. "Rapid differentiation of species of Botryosphaeriaceae by PCR fingerprinting." Research in Microbiology. 158 (2007): 112-121. Abstract
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Araújo, J., and J. D. Mitchell. "Relative ranks in the monoid of endomorphisms of an independence algebra." Monatsh. Math.. 151 (2007): 1-10. AbstractWebsite
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Gomes, L., F. Coito, A. Costa, L. Palma, and P. Almeida. "Remote laboratories support within teaching and learning activities." International Conference on Remote Engineering and Virtual Instrumentation (2007). Abstract
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Aguas, H., Pereira Costa Raniero Fortunato Martins L. D. L. "Role of the oxide layer on the performances of a-Si:H schottky structures applied to PDS fabrication." Materials Research Society Symposium Proceedings. Vol. 910. 2007. 415-420. Abstract

In this work we present results of studies performed on Schottky and metal-insulator-semiconductor (MIS) position sensitive detectors (PSD) structures: substrate (glass)/ Cr (300 nm) / a-Si:H [n] (37 nm) / a-Si:H [i] (600 nm) / SiO2 (1.5 nm - for the MIS) / Au (7 nm). The effect of the interfacial oxide layer between Au and a-Si:H, for the MIS structures, was studied and compared with the Schottky, in order to determine how beneficial it could be for device performances and time degradation. For doing so, the Au thickness of 70Å was deposited by thermal evaporation on an oxide free (Schottky) and oxidized (≈20Å) (MIS) a-Si:H surfaces. These structures were characterized by SIMS, RBS, SEM and AFM in order to correlate the obtained diffusion profile of Au at the interface and the topography with the presence of the oxide at the interface. The results show that the Au inter-diffuses very easily in the oxide free a-Si:H surface, even at room temperature, degrading the devices performance. On the other hand, the MIS structures, with their interfacial oxide present no structural changes after annealing and the PSD produced are stable. We believe that this effect is associated with the barrier effect of the interfacial oxide that prevents the Au diffusion. The optimized 1D MIS sensors are stable and exhibit a linearity error as low as 0.8 % and sensitivities of 33 mV/cm for a 5 mW spot beam intensity at a wavelength of 532 nm, while the Schottky sensors showed a time degradation of their characteristics. © 2006 Materials Research Society.

MC, Lanca, Fu M, Neagu E, Dissado LA, Marat-MendeS J, Tzimas A, and Zadeh S. "Space charge analysis of electrothermally aged XLPE cable insulation." Journal of Non-Crystalline Solids. 353.47-51 (2007). AbstractWebsite

Cross-linked polyethylene (XLPE) is currently widely used as an insulating material for power cables due to its good physical properties, however when in use it undergoes an electrical ageing process. Its ability to trap electric charge can give rise to space charge accumulation in the bulk of the polymer and produce localised electric stresses that can lead to cable failure, since the electric field will be increased above the design stress in some regions favouring the initiation of degradation there. In this work the PEA (pulsed electro-acoustic) method was used to compare the charge dynamics in three samples (XLPE cable peelings) aged in different ways (electrothermally in the laboratory, field aged in service and thermally aged in the laboratory). Very different transient behavior was found depending upon the ageing history. This is related to differences in the migration of chemical species in the insulation layer, which are known to act as charge traps. All materials showed heterocharge peaks when the space charge reached stability, the magnitude of which seems to be related to the severity of the ageing.

Pereira, AS, P. Tavares, F. Folgosa, R. M. Almeida, I. Moura, and JJG Moura. "Superoxide reductases." European Journal of Inorganic Chemistry (2007): 2569-2581. AbstractWebsite

Reactive oxygen species (ROS), when in excess, are among the most deleterious species an organism can deal with. The physiological effects of ROS include amino acid chain cleavage, DNA degradation and lipid oxidation, among others. They can be formed in the cytoplasm in a variety of ways, including autooxidation reactions (FMN- and FAD-containing enzymes) and Fenton reactions as a result of the cytoplasmatic pool of iron ions. The superoxide anion (021, despite its short half-life in solution, is particularly pernicious as it can form other reactive ROS (such as the strong oxidant peroxynitrite) or oxidize and/or reduce cellular components. For strict anaerobic or microaerophilic bacteria it is of particular importance to be able to dispose of ROS in a controlled manner, especially if these organisms are temporarily exposed to air. This review aims to describe the structural characteristics of superoxide reductases (SORs) and mechanistic aspects of biological superoxide anion reduction. SORs can be considered the main class of enzymes behind the oxygen detoxification pathway of anaerobic and microaerophilic bacteria. The geometry of the active site (three classes have been described), the possible electron donors in vivo and the current hypothesis for the catalytic mechanism will be discussed. Some phylogenetic considerations are presented, regarding the primary structure of SORs currently available in genome databases. ((c) Wiley-VCH Verlag GmbH & Co. KGaA, 69451 Weinheim, Germany, 2007).

Santos, H. M., M. S. Diniz, P. M. Costa, I. Peres, M. H. Costa, S. Alves, and J. L. Capelo. "Toxicological effects and bioaccumulation in the freshwater clam (Corbicula fluminea) following exposure to trivalent arsenic." Environmental Toxicology. 22 (2007): 502-509. AbstractWebsite
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Henriques, J., P. Carvalho, P. Gil, A. Marques, T. Rocha, B. Ribeiro, M. Antunes, R. Sal, and J. Habetha. "Ventricular Arrhythmias Assessment." n/a. n/a 2007. Abstract
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Pereira, Luis, Aguas, Hugo, Beckers, and Manfred. "{Characterization of nickel induced crystallized silicon by spectroscopic ellipsornetry}." 910 (2007): 529-534. AbstractWebsite
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Nunes, Y., A. Wemans, H. P. Marques, C. Marques, Q. Ferreira, O. M. N. D. Teodoroa, E. Alvesb, and M. J. P. Maneira. "{Dual DC magnetron cathode co-deposition of ( Al , Ti ) and ( Al , Ti , N ) thin films with controlled depth composition}." Vaccum. 81 (2007): 1503-1506. Abstract

In this work (Al,Ti) and (Al,Ti,N) films with composition gradient in depth starting either with pure Al or pure Ti were deposited on Si, glass and Au at room temperature in a DC magnetron discharge without bias. The plasma parameters, for both custom made cathodes, were determined and the process was real-time controlled to obtain in the plasma the necessary deposition changes in relative metal abundances to get the desired depth profile composition on the films. In this work the process was designed to get a constant gradient for the composition depth profile. The morphology of the films was analysed by SEM while the composition gradients were measured by SIMS, XPS and RBS, confirming preset nominal depth composition profile of the films. To obtain (Al,Ti,N) thin films with gradient depth composition, N2 must be supplied to the discharges. The plasma behaviour is modified in the presence of N2 and the influence on the film characteristics is studied using the same techniques referred above. The (Al,Ti) and (Al,Ti,N) film properties are compared. We succeed in validating the coating technique opening new application possibilities.

Marques, Hugo P., David C. Alves, Ana R. Canário, Augusto M. C. Moutinho, and Orlando M. N. D. Teodoro. "{High performance temperature controlled UHV sample holder.}." The Review of scientific instruments. 78 (2007): 035103. AbstractWebsite

A requirement of many surface science studies is the capability to alter a sample temperature in a controlled mode. Sample preparation procedures such as heating or cooling ramps, high temperature spikes, fast annealing, or simply maintaining a sample at a very high, or very low, temperature are common. To address these issues, we describe the design and the construction of a multipurpose sample holder. Key points of this design are operation in an extended temperature range from liquid nitrogen (LN(2)) temperature to approximately 1300 K, temperature control during heating and cooling, low thermal inertia with rates up to 50 K s(-1) (heating) and -20 K s(-1) (cooling), and small heated volume to minimize background problems in thermal desorption spectroscopy (TDS) spectra. With this design the sample can be flash heated from LN(2) temperature to 1300 K and cooled down again in less than 100 s. This sample holder was mounted and tested in a multitechnique apparatus and adds a large number of sample preparation procedures as well as TDS to the list of already available surface analysis techniques.