Publications

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Submitted
von Stosch, M., R. Oliveira, J. Peres, and Feyo S. de Azevedo. "{A hybrid semi-parametric approach to dynamical modelling of biological systems based on delayed differential equations}." {NEW BIOTECHNOLOGY}. {25} (Submitted): {S350}. Abstract
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von Stosch, M., R. Oliveira, J. Peres, and Feyo S. de Azevedo. "{A novel identification method for hybrid (N)PLS dynamical systems with application to bioprocesses}." {EXPERT SYSTEMS WITH APPLICATIONS}. {38} (Submitted): {10862-10874}. Abstract
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Ataide, F., F. Freitas, M. A. Miranda Reis, and R. Oliveira. "{Analysis of oxygen transport enhancement by functionalized magnetic nanoparticles (FMP) in biopolymer production processes}." {NEW BIOTECHNOLOGY}. {25} (Submitted): {S203}. Abstract
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Teixeira, A. P., J. M. L. Dias, P. M. Alves, M. J. T. Carrondo, and R. Oliveira. "{Macroscopic control of intracellular fluxes: application to mammalian cell cultures}." {NEW BIOTECHNOLOGY}. {25} (Submitted): {S332}. Abstract
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von Stosch, Moritz, Joana Peres, Sebastiao Feyo de Azevedo, and Rui Oliveira. "{Modelling biochemical networks with intrinsic time delays: a hybrid semi-parametric approach}." {BMC SYSTEMS BIOLOGY}. {4} (Submitted). Abstract
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Roldao, Antonio, Helena L. A. Vieira, Paula M. Alves, R. Oliveira, and Manuel J. T. Carrondo. "{Intracellular dynamics in rotavirus-like particles production: Evaluation of multigene and monocistronic infection strategies}." {PROCESS BIOCHEMISTRY}. {41} (Submitted): {2188-2199}. Abstract
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Ricardo, Ana R., Rui Oliveira, Svetlozar Velizarov, Maria A. M. Reis, and Joao G. Crespo. "{Multivariate statistical modelling of mass transfer in a membrane-supported biofilm reactor}." {PROCESS BIOCHEMISTRY}. {46} (Submitted): {1981-1992}. Abstract
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Guerreiro, L., P. M. Pereira, I. M. Fonseca, R. M. Martin-Aranda, A. M. Ramos, J. M. L. Dias, R. Oliveira, and J. Vital. "{PVA embedded hydrotalcite membranes as basic catalysts for biodiesel synthesis by soybean oil methanolysis}." {CATALYSIS TODAY}. {156} (Submitted): {191-197}. Abstract
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Dias, J. M. L., L. S. Serafim, P. C. Lemos, M. A. M. Reis, and R. Oliveira. "{Mathematical modelling of a mixed culture cultivation process for the production of polyhydroxybutyrate}." {BIOTECHNOLOGY AND BIOENGINEERING}. {92} (Submitted): {209-222}. Abstract
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Carinhas, Nuno, Aaron Mark Robitaille, Suzette Moes, Manuel Jose Teixeira Carrondo, Paul Jenoe, Rui Oliveira, and Paula Marques Alves. "{Quantitative Proteomics of Spodoptera frugiperda Cells during Growth and Baculovirus Infection}." {PLOS ONE}. {6} (Submitted). Abstract
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Freitas, Filomena, Vitor D. Alves, Monica Carvalheira, Nuno Costa, Rui Oliveira, and Maria A. M. Reis. "{Emulsifying behaviour and rheological properties of the extracellular polysaccharide produced by Pseudomonas oleovorans grown on glycerol byproduct}." {CARBOHYDRATE POLYMERS}. {78} (Submitted): {549-556}. Abstract
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Hilliou, Loic, Filomena Freitas, Rui Oliveira, Maria A. M. Reis, David Lespineux, Christian Grandfils, and Vitor D. Alves. "{Solution properties of an exopolysaccharide from a Pseudomonas strain obtained using glycerol as sole carbon source}." {CARBOHYDRATE POLYMERS}. {78} (Submitted): {526-532}. Abstract
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Ferreira, A. R., F. Ataide, M. von Stosch, J. M. L. Dias, J. J. Clemente, A. E. Cunha, and R. Oliveira. "{Application of adaptive DO-stat feeding control to Pichia pastoris X33 cultures expressing a single chain antibody fragment (scFv)}." {BIOPROCESS AND BIOSYSTEMS ENGINEERING}. {35} (Submitted): {1603-1614}. Abstract
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Carrondo, Manuel, Nuno Carinhas, Vicente Bernal, Cristina Peixoto, Rui Oliveira, and Paula Alves. "{Baculovirus for gene therapy: use of metabolomics for production and membranes for purification}." {HUMAN GENE THERAPY}. {20} (Submitted): {1401-1402}. Abstract
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Freitas, F., C. A. V. Torres, V. Alves, M. Cruz, R. Oliveira, and M. A. M. Reis. "{Conversion of glycerol into a new high-value fucose-containing bacterial exopolysaccharide}." {JOURNAL OF BIOTECHNOLOGY}. {150} (Submitted): {S88}. Abstract
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Pardelha, F., M. G. E. Albuquerque, M. A. M. Reis, R. Oliveira, and J. M. L. Dias. "{Metabolic modeling of polyhydroxyalkanoates (PHA) production from complex mixtures of competing volatile fatty acids (VFA) by mixed microbial cultures (MMC)}." {JOURNAL OF BIOTECHNOLOGY}. {150} (Submitted): {S565}. Abstract
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Torres, Cristiana A. V., Filomena Freitas, Vtor D. Alves, Madalena Cruz, Rui Oliveira, and Maria A. M. Reis. "{New Microbial Fucose-Containing Polysaccharide from Glycerol byproduct: Rheological Studies}." {JOURNAL OF BIOTECHNOLOGY}. {150} (Submitted): {S565}. Abstract
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Chagas, B., F. Freitas, L. Mafra, J. Cortez, R. Oliveira, and M. A. M. Reis. "{Production of chitin-glucan complex (CGC) from biodiesel industry byproduct}." {JOURNAL OF BIOTECHNOLOGY}. {150} (Submitted): {S381-S382}. Abstract
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Roca, Christophe, Barbara Chagas, Ines Farinha, Filomena Freitas, Luis Mafra, Filipe Aguiar, Rui Oliveira, and Maria A. M. Reis. "{Production of yeast chitin-glucan complex from biodiesel industry byproduct}." {PROCESS BIOCHEMISTRY}. {47} (Submitted): {1670-1675}. Abstract
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Teixeira, A. P., R. Oliveira, P. M. Alves, and M. J. T. Carrondo. "{Advances in on-line monitoring and control of mammalian cell cultures: Supporting the PAT initiative}." {BIOTECHNOLOGY ADVANCES}. {27} (Submitted): {726-732}. Abstract
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Dias, Joao M. L., Paulo C. Lemos, Luisa S. Serafim, Cristina Oliveira, Marta Eiroa, Maria G. E. Albuquerque, Ana M. Ramos, Rui Oliveira, and Maria A. M. Reis. "{Recent advances in polyhydroxyalkanoate production by mixed aerobic cultures: From the substrate to the final product}." {MACROMOLECULAR BIOSCIENCE}. {6} (Submitted): {885-906}. Abstract
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Ferreira, Ana R., Joao M. L. Dias, Ana P. Teixeira, Nuno Carinhas, Rui M. C. Portela, Ines A. Isidro, Moritz von Stosch, and Rui Oliveira. "{Projection to latent pathways (PLP): a constrained projection to latent variables (PLS) method for elementary flux modes discrimination}." {BMC SYSTEMS BIOLOGY}. {5} (Submitted). Abstract
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Freitas, Filomena, Vitor D. Alves, Joana Pais, Monica Carvalheira, Nuno Costa, Rui Oliveira, and Maria A. M. Reis. "{Production of a new exopolysaccharide (EPS) by Pseudomonas oleovorans NRRL B-14682 grown on glycerol}." {PROCESS BIOCHEMISTRY}. {45} (Submitted): {297-305}. Abstract
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Dias, Joao M. L., Filipa Pardelha, Mario Eusebio, Maria A. M. Reis, and Rui Oliveira. "{On-Line Adaptive Metabolic Flux Analysis: Application to PHB Production by Mixed Microbial Cultures}." {BIOTECHNOLOGY PROGRESS}. {25} (Submitted): {390-398}. Abstract
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Oliveira, R., J. J. Clemente, A. E. Cunha, and M. J. T. Carrondo. "{Adaptive dissolved oxygen control through the glycerol feeding in a recombinant Pichia pastoris cultivation in conditions of oxygen transfer limitation}." {JOURNAL OF BIOTECHNOLOGY}. {116} (Submitted): {35-50}. Abstract
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