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2023
Ito, Yoshiaki, Tatsunori Tochio, Michiru Yamashita, Sei Fukushima, Takashi Shoji, Katarzyna Słabkowska, Łukasz Syrocki, Marek Polasik, Jana Padežnik Gomilsek, José Pires Marques, Jorge Miguel Sampaio, Mauro Guerra, Jorge Machado, José Paulo Santos, Assala Hamidani, Abdelhalim Kahoul, Paul Indelicato, and Fernando Parente. "Intensity Ratio of Kβ/Kα in Selected Elements from Mg to Cu, and the Chemical Effects of Cr Kα1,2 Diagram Lines and Cr Kβ/Kα Intensity Ratio in Cr Compounds." International Journal of Molecular Sciences. 24 (2023): 5570. Abstract

K$_{\alpha , \beta}$ X-ray lines from photon excitation were measured in selected elements from Mg to Cu using a high-resolution double-crystal X-ray spectrometer with a proportional counter, and the K$_beta$/K$_\alpha$ intensity ratio for each element was obtained, after correcting for self-absorption, detection efficiency, and crystal reflectance. This intensity ratio increases rapidly from Mg to Ca but, in the 3d elements region, the increase becomes slower. This is related to the intensity of the Kβ line involving valence electrons. The slow increase of this ratio in the 3d elements region is thought to be due to the correlation between 3d and 4s electrons. Moreover, the chemical shifts, FWHM, asymmetry indices, and Kβ/Kα intensity ratios of the Cr compounds, due to different valences, were also investigated using the same double-crystal X-ray spectrometer. The chemical effects were clearly observed, and the Kβ/Kα intensity ratio was found to be compound-dependent for Cr.

Tavares, Francisco JTM, Paula I. P. Soares, Jorge Carvalho Silva, and João Paulo Borges. "Preparation and in vitro characterization of magnetic CS/PVA/HA/pSPIONs scaffolds for magnetic hyperthermia and bone regeneration." 24.2 (2023): 1128. Abstract
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Trovão, Filipa, Viviana G. Correia, Frederico M. Lourenço, Diana O. Ribeiro, Ana Luísa Carvalho, Angelina S. Palma, and Benedita A. Pinheiro. "The structure of a Bacteroides thetaiotaomicron carbohydrate-binding module provides new insight into the recognition of complex pectic polysaccharides by the human microbiome." (2023): 100084. AbstractWebsite

TheBacteroides thetaiotaomicronhas developed a consortium of enzymes capable of overcoming steric constraints and degrading, in a sequential manner, the complex rhamnogalacturonan II (RG-II) polysaccharide. BT0996 protein acts in the initial stages of the RGII depolymerisation, where its two catalytic modules remove the terminal monosaccharides from RG-II side chains A and B. BT0996 is modular and has three putative carbohydrate-binding modules (CBMs) for which the roles in the RG-II degradation are unknown. Here, we present the characterisation of themoduleat the C-terminal domain, which we designated BT0996C. The high-resolution structure obtained by X-ray crystallography reveals that the protein displays a typical β-sandwich fold with structural similarity to CBMs assigned to families 6 and 35. The distinctive features are: 1) the presence of several charged residues at the BT0996-C surface creating a large, broad positive lysine-rich patch that encompasses the putative binding site; and 2) the absence of the highly conserved binding-site signatures observed in CBMs from families 6 and 35, such as region A tryptophan and region C asparagine. These findings hint at a binding mode of BT0996-C not yet observed in its homologues. In line with this, carbohydrate microarrays and microscale thermophoresis show the ability of BT0996-C to bind α1-4-linked polygalacturonic acid, and that electrostatic interactions are essential for the recognition of the anionic polysaccharide. The results support the hypothesis that BT0996-C may have evolved to potentiate the action of BT0996 catalytic modules on the complex structure of RG-II by binding to the polygalacturonic acid backbone sequence.

Dinis, Duarte Caldeira, José Rui Figueira, and Ângelo Palos Teixeira. "A multiple criteria approach for ship risk classification: An alternative to the Paris MoU Ship Risk Profile." Socio-Economic Planning Sciences. 90 (2023): 101718. AbstractWebsite
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Moniz, António B., Marta Candeias, and Nuno Boavida. "Artificial Generative Intelligence and Work – Portugal." Generative Artificial Intelligence – Opportunities, Risks, and Policy Challenges. Eds. Bjørn Bedsted, Nicklas Bang Bådum, Reinhard Grünwald, Steffen Albrecht, Tore Tennøe, Ferran Domínguez, and Clara Marsan. Barcelona: EPTA, 2023. 70-77.report_en_2.pdf
Conti, Simone, Pierangelo Masarati, Emanuel Tschopp, Andrea Zanoni, Octavio Mateus, and Giuseppe Sala. "How to simulate soft tissues in extinct animals. Using sauropod dinosaurs as a case study." ECCOMAS Thematic Conference on Multibody Dynamics. 2023. Abstractconti_et_al_2023_id_218_424_eccomas_mbd_2023_congresso_lisbona.pdf

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Tavares, S., C. P. Brás, A. L. Custódio, V. Duarte, and P. Medeiros. "Parallel strategies for Direct Multisearch." Numerical Algorithms. 92 (2023): 1757-1788.
Díaz, Rafael Sanabria, Brisid Isufi, Leandro Mouta Trautwein, and António Pinho Ramos. "Nonlinear analysis of flat slab-column connections to optimize the use of HPFRC under monotonic vertical loading." Structural Concrete. 24 (2023): 5787-5807. AbstractWebsite
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Ramos, António Pinho, Brisid Isufi, Rui Marreiros, Dario Coronelli, Teresa Netti, Marco Lamperti Tornaghi, Georgios Tsionis, and Aurelio Muttoni. "Seismic Performance of Strengthened Slab-Column Connections in a Full-Scale Test." Journal of Earthquake Engineering. 27 (2023): 2299-2318. AbstractWebsite
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Duval, Louis, Rοbert Loetzsch, Heinrich Beyer, Dariusz Banaś, Perla Dergham, Jan Glorius, Robert E. Grisenti, Mauro Guerra, Alexandre Gumberidze, Pierre-Michel Hillenbrand, Paweł Jagodziński, Emily Lamour, Yuri Litvinov, Jorge Machado, Gerhard Paulus, Nancy Paul, Nikolaos Petridis, Jose-Paulo Santos, Marius Scheidel, Ragandeep S. Sidhu, Uwe Spillmann, Sébastien Steydli, Karol Szary, Sergiy Trotsenko, Ingo Uschmann, Günther Weber, Thomas Stöhlker, Paul Indelicato, and Martino Trassinelli. "{X-ray spectroscopy of few-electron uranium ions for tests of QED}." Proceedings of FAIR next generation scientists - 7th Edition Workshop — PoS(FAIRness2022). Vol. 419. 2023. 012. Abstract
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2022
Amaro, P., A. Adamczak, Abdou M. Ahmed, L. Affolter, F. D. Amaro, P. Carvalho, T. L. Chen, L. M. P. Fernandes, M. Ferro, D. Goeldi, T. Graf, M. Guerra, T. W. Hänsch, C. A. O. Henriques, Y. C. Huang, P. Indelicato, O. Kara, K. Kirch, A. Knecht, F. Kottmann, Y. W. Liu, J. Machado, M. Marszalek, R. D. P. Mano, C. M. B. Monteiro, F. Nez, J. Nuber, A. Ouf, N. Paul, R. Pohl, E. Rapisarda, J. M. F. dos Santos, J. P. Santos, P. A. O. C. Silva, L. Sinkunaite, J. T. Shy, K. Schuhmann, S. Rajamohanan, A. Soter, L. Sustelo, D. Taqqu, L. B. Wang, F. Wauters, P. Yzombard, M. Zeyen, and A. Antognini. "Laser excitation of the 1s-hyperfine transition in muonic hydrogen." SciPost Physics. 13 (2022). Abstract

The CREMA collaboration is pursuing a measurement of the ground-state hyperfine splitting (HFS) in muonic hydrogen (μp) with 1 ppm accuracy by means of pulsed laser spectroscopy to determine the two-photon-exchange contribution with 2×10-4 relative accuracy. In the proposed experiment, the μp atom undergoes a laser excitation from the singlet hyperfine state to the triplet hyperfine state, then is quenched back to the singlet state by an inelastic collision with a H2 molecule. The resulting increase of kinetic energy after the collisional deexcitation is used as a signature of a successful laser transition between hyperfine states. In this paper, we calculate the combined probability that a μp atom initially in the singlet hyperfine state undergoes a laser excitation to the triplet state followed by a collisional-induced deexcitation back to the singlet state. This combined probability has been computed using the optical Bloch equations including the inelastic and elastic collisions. Omitting the decoherence effects caused by the laser bandwidth and collisions would overestimate the transition probability by more than a factor of two in the experimental conditions. Moreover, we also account for Doppler effects and provide the matrix element, the saturation fluence, the elastic and inelastic collision rates for the singlet and triplet states, and the resonance linewidth. This calculation thus quantifies one of the key unknowns of the HFS experiment, leading to a precise definition of the requirements for the laser system and to an optimization of the hydrogen gas target where μp is formed and the laser spectroscopy will occur.

Tipa, Cezar, Maria T. Cidade, João P. Borges, Luis C. Costa, Jorge C. Silva, and Paula I. P. Soares. "Clay-Based Nanocomposite Hydrogels for Biomedical Applications: A Review." 12.19 (2022): 3308. Abstract
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Tipa, C., M. T. Cidade, J. P. Borges, L. C. Costa, JC Silva, and P. I. P. Soares Clay-Based Nanocomposite Hydrogels for Biomedical Applications: A Review. Nanomaterials 2022, 12, 3308. s Note: MDPI stays neutral with regard to jurisdictional claims in published …, 2022. Abstract
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Tavares, Francisco JTM, Paula I. P. Soares, Jorge Carvalho Silva, and João Paulo Borges. "Magnetic Scaffolds for Bone Cancer Theranostics." 8.1 (2022): 127. Abstract
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Conti, Simone, Emanuel Tschopp, Octávio Mateus, Andrea Zanoni, Pierangelo Masarati, and Giuseppe Sala. "Multibody analysis and soft tissue strength refute supersonic dinosaur tail." 12.1 (2022): 19245. Abstractconti_et_al_2022._multibody_analysis_and_soft_tissue_strength_refute_supersonic_dinosaur_tail.pdfWebsite

Sauropod dinosaurs are well known for their massive sizes and long necks and tails. Among sauropods, flagellicaudatan dinosaurs are characterized by extreme tail elongation, which has led to hypotheses regarding tail function, often compared to a whip. Here, we analyse the dynamics of motion of a 3D model of an apatosaurine flagellicaudatan tail using multibody simulation and quantify the stress-bearing capabilities of the associated soft tissues. Such an elongated and slender structure would allow achieving tip velocities in the order of 30 m/s, or 100 km/h, far slower than the speed of sound, due to the combined effect of friction of the musculature and articulations, as well as aerodynamic drag. The material properties of the skin, tendons, and ligaments also support such evidence, proving that in life, the tail would not have withstood the stresses imposed by travelling at the speed of sound, irrespective of the conjectural ‘popper’, a hypothetical soft tissue structure analogue to the terminal portion of a bullwhip able to surpass the speed of sound.

Dinis, Duarte, Ana Barbosa-Póvoa, and Ângelo Palos Teixeira. "Enhancing capacity planning through forecasting: An integrated tool for maintenance of complex product systems." International Journal of Forecasting. 38 (2022): 178-192. AbstractWebsite
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Teixeira, P., C. Martins, and H. Rocha Abordagem STEAM: articulação disciplinar e práticas letivas de professores. Atas do Encontro de Investigação em Educação Matemática., 2022.
Fernandes, Cláudio A., Alexei Yu. Karlovich, and Yuri I. Karlovich. "Fourier convolution operators with symbols equivalent to zero at infinity on Banach function spaces." Current Trends in Analysis, its Applications and Computation. Eds. P. Cerejeiras, M. Reissig, I. Sabadini, and J. Toft. Springer, 2022. 335-343.
Teixeira, P., C. Martins, and H. Rocha STE(A)M approach: Distinguishing and discussing meanings. EduLearn. Spain: IATED, 2022. Abstract

The STE(A)M approach has been recognized by several authors for its potential in assisting teaching and learning, and several curriculum standards already value its application in the classroom. This approach is based on the articulation between different areas, the clarification, and the deepening of the concepts being studied. Although there are different approaches, according to the fields involved, STEM and STEAM are two among the most often mentioned in the literature. STEM is based on learning that integrates the following areas of knowledge: Science, Technology, Engineering, and Mathematics. The conceptualization of the STE(A)M approach is not consensual and uniform. There are different models focusing on problem-solving based learning, project-based-learning, design-based learning, and engineering models. Still, different authors present different conceptualizations of this approach. In this paper, we relied on the existing literature to discuss the different understandings of the STE(A)M approach. We will also pay attention to mathematics and how different authors see the disciplines’ role within a STE(A)M approach and discuss the evolution of the mentioned authors’ positions throughout time. Thus, methodologically, we undertook the following steps: (i) literature search based on the selected keywords; (ii) selection of the texts, considering the authors and time gap, in order to analyze the evolution of the research and (iii) collection and organization of the relevant topics for the study. This study aims to present the meanings, conceptualizations, and possible influences present in different models and for understand the evolution of the STEM and STEAM approaches over time. The main findings suggest a focus on the interdisciplinary or transdisciplinary approach as opposed to the primeval years of investigations in STEM and STEAM when many authors advocated a multidisciplinary approach. This change in thinking is due to the need to train students in an integral and holistic manner, developing citizens with transversal knowledge and skills prepared for the current societal challenges.

Muttoni, A., D. Coronelli, M. Lamperti Tornaghi, L. Martinelli, I. R. Pascu, A. Pinho Ramos, G. Tsionis, P. Bamonte, B. Isufi, and A. Setiawan. "Deformation capacity evaluation for flat slab seismic design." Bulletin of Earthquake Engineering. 20 (2022): 1619-1654. AbstractWebsite
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Caetano, Constantino, Maria Luísa Morgado, Paula Patrício, Andreia Leite, Ausenda Machado, André Torres, João Freitas Pereira, Sónia Namorado, Ana Sottomayor, André Peralta-Santos, and Baltazar Nunes. "Measuring the impact of COVID-19 vaccination and immunity waning: a modelling study for Portugal." Vaccine (2022). AbstractWebsite

Vaccination strategies to control COVID-19 have been ongoing worldwide since the end of 2020. Understanding their possible effect is key to prevent future disease spread. Using a modelling approach, this study intends to measure the impact of the COVID-19 Portuguese vaccination strategy on the effective reproduction number and explore three scenarios for vaccine effectiveness waning. Namely, the no-immunity-loss, 1-year and 3-years of immunity duration scenarios. We adapted an age-structured SEIR deterministic model and used Portuguese hospitalisation data for the model calibration. Results show that, although the Portuguese vaccination plan had a substantial impact in reducing overall transmission, it might not be sufficient to control disease spread. A significant vaccination coverage of those above 5 years old, a vaccine effectiveness against disease of at least 80% and softer non-pharmaceutical interventions (NPIs), such as mask usage and social distancing, would be necessary to control disease spread in the worst scenario considered. The immunity duration scenario of 1-year displays a resurgence of COVID-19 hospitalisations by the end of 2021, the same is observed in 3-year scenario although with a lower magnitude. The no-immunity-loss scenario presents a low increase in hospitalisations. In both the 1-year and 3-year scenarios, a vaccination boost of those above 65 years old would result in a 53% and 38% peak reduction of non-ICU hospitalisations, respectively. These results suggest that NPIs should not be fully phased-out but instead be combined with a fast booster vaccination strategy to reduce healthcare burden.

Díaz, Rafael Sanabria, Brisid Isufi, Leandro Mouta Trautwein, and António Pinho Ramos. "Nonlinear analysis of flat slab-column connections to optimize the use of HPFRC under monotonic vertical loading." Structural Concrete (2022). AbstractWebsite
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Torabian, Ala, Brisid Isufi, Davood Mostofinejad, and António Pinho Ramos. "STRENGTHENING OF FLAT SLABS WITH FIBRE REINFORCED POLYMERS USING THE EXTERNALLY BONDED REINFORCEMENT ON GROOVES METHOD: A REVIEW." REHABEND. 2022. 1946-1953. Abstract
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Boillos, J. M., D. Cortina-Gil, J. Benlliure, J. L. Rodr{\'ıguez-Sánchez, H. Alvarez-Pol, L. Atar, T. Aumann, V. V. Avdeichikov, S. Beceiro-Novo, D. Bemmerer, C. A. Bertulani, K. Boretzky, M. J. G. Borge, M. Caamano, C. Caesar, E. Casarejos, W. Catford, J. Cederkäll, M. Chartier, L. Chulkov, E. Cravo, R. N. P. Crespo, I. Dillmann, Diaz P. Fernandez, Z. Elekes, J. Enders, O. Ershova, A. Estrade, F. Farinon, L. M. Fraile, M. Freer, Galaviz D. Redondo, H. Geissel, R. Gernhäuser, P. Golubev, K. Göbel, J. Hagdahl, T. Heftrich, M. Heil, M. Heine, A. Heinz, A. Henriques, M. Holl, A. Hufnagel, A. Ignatov, H. T. Johansson, B. Jonson, J. Kahlbow, N. Kalantar-Nayestanaki, R. Kanungo, A. Kelic-Heil, A. Knyazev, T. Kröll, N. Kurz, M. Labiche, C. Langer, T. Le Bleis, R. Lemmon, S. Lindberg, J. F. D. C. Machado, J. Marganiec, A. Movsesyan, E. Nacher, M. A. Najafi, T. Nilsson, C. Nociforo, V. Panin, S. Paschalis, A. Perea, M. Petri, S. Pietri, R. Plag, R. Reifarth, G. Ribeiro, C. Rigollet, D. M. Rossi, M. Röder, D. Savran, H. Scheit, H. Simon, O. Sorlin, I. J. Syndikus, J. T. Taylor, O. Tengblad, R. Thies, Y. Togano, M. Vandebrouck, P. J. F. Velho, V. Volkov, A. Wagner, F. Wamers, H. Weick, C. Wheldon, G. L. Wilson, J. S. Winfield, P. Woods, D. Yakorev, M. Zhukov, A. Zilges, and K. Zuber. "{Isotopic cross sections of fragmentation residues produced by light projectiles on carbon near $400A$ MeV}." (2022): 1-13. Abstract

Phys. Rev. C 105, 014611 (2022). doi:10.1103/PhysRevC.105.014611

Ménesguen, Y., M. - C. Lépy, Y. Ito, M. Yamashita, S. Fukushima, T. Tochio, M. Polasik, K. Słabkowska, Ł. Syrocki, P. Indelicato, J. P. Gomilsek, J. P. Marques, J. M. Sampaio, J. Machado, P. Amaro, M. Guerra, J. P. Santos, and F. Parente. "{Structure of single KL$^0$-, double KL$^1$-, and triple KL$^2$- ionization in Mg, Al, and Si targets induced by photons, and their absorption spectra}." Radiation Physics and Chemistry. 194 (2022): 110048. AbstractWebsite

Radiation Physics and Chemistry, 194 (2022) 110048. doi:10.1016/j.radphyschem.2022.110048