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2013
Galesio, M., H. López-Fdez, M. Reboiro-Jato, S. Gómez-Meire, D. Glez-Peña, F. Fdez-Riverola, C. Lodeiro, M. E. Diniz, and J. L. Capelo. "Speeding up the screening of steroids in urine: Development of a user-friendly library." Steroids. 78 (2013): 1226-1232. AbstractWebsite
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Palma, Angelina S., Benedita Pinheiro, Yan Liu, Yoichi Takeda, Wengang Chai, Yukishige Ito, Maria Joao Romao, Ana Luisa Carvalho, and Ten Feizi. "The Structural Basis of the Recognition of Di-glucosylated N-glycans by the ER Lectin Malectin." Glycobiology. 23 (2013): 1368-1369. Abstract
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Pinheiro, C., K. Sergeant, C. M. Machado, J. Renaut, and C. P. Ricardo. "Two Traditional Maize Inbred Lines of Contrasting Technological Abilities Are Discriminated by the Seed Flour Proteome." Journal of Proteome Research. 12 (2013): 3152-3165. AbstractWebsite
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Pinheiro, C., K. Sergeant, C. M. Machado, J. Renaut, and C. P. Ricardo. "Two Traditional Maize Inbred Lines of Contrasting Technological Abilities Are Discriminated by the Seed Flour Proteome." Journal of Proteome Research. 12 (2013): 3152-3165. AbstractWebsite
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Agra, A., J. O. Cerdeira, and C. Requejo. "Using decomposition to improve greedy solutions of the optimal diversity management problem." International Transactions in Operational Research. 20 (2013): 617-625. Abstract
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Matias Urbieta, Ana Oliveira, João Araújo, Armanda Rodrigues, Ana Moreira, Sílvia Gordillo, and Gustavo Rossi. "Web-GIS models: accomplishing modularity with aspects." Innovations in Systems and Software Engineering (2013): 1-17. AbstractWebsite
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Silva, S. S., A. R. C. Duarte, J. M. Oliveira, J. F. Mano, and R. L. Reis. "{Alternative methodology for chitin-hydroxyapatite composites using ionic liquids and supercritical fluid technology}." Journal of Bioactive and Compatible Polymers. 28 (2013). Abstract

An alternative, green method was used to develop chitin-based biocomposite (ChHA) materials by an integrated strategy using ionic liquids, supercritical fluid drying, and salt leaching. ChHA matrices were produced by dissolving chitin in 1-butyl-methylimidazolium acetate along with salt and/or hydroxyapatite particles and then subsequent drying. The ChHA composite formed had a heterogeneous porous microstructure with 65{%}-85{%} porosity and pore sizes in the range of 100-300 $μ$m. The hydroxyapatite was found to be well distributed within the composite structures and had a positive effect in the viability and proliferation of osteoblast-like cells, in vitro. Our findings indicate that these ChHA matrices have potential applications in bone tissue engineering. © The Author(s) 2013.

Silva, Simone S., Ana Rita C. Duarte, João F. Mano, and Rui L. Reis. "{Design and functionalization of chitin-based microsphere scaffolds}." Green Chemistry. 15 (2013): 3252. AbstractWebsite

Chitin agglomerated scaffolds were produced and functionalized using the green chemistry principles and clean technologies. Such combination enabled the functionalization of chitin microparticles prepared through dissolution of the polymer in ionic liquids, followed by of the application of a sol-gel method. Finally, the 3D constructs were moulded and dried using a supercritical assisted agglomeration method. Structural and morphological characterization is presented using scanning electronic microscopy (SEM) and micro-computed tomography ([small micro]-CT). An evaluation of the bioactive behavior of the matrices was made by immersing them in simulated body fluid (SBF) for up to 21 days. The potential of such matrices as drug delivery systems was evaluated after the incorporation of dexamethasone into the matrices during drying in supercritical assisted agglomeration. The findings suggested that the morphological features such as porosity, interconnectivity and pore size distribution of the matrices can be tunned by changing particle size, chitin concentration and the pressure applied during moulding. Chitin microspheres were modified by siloxane and silanol groups, providing a bioactive behavior; the apatite formation was shown to be dependent on the amount and arrangement of silanol groups. Furthermore, in vitro drug release studies showed that dexamethasone was sustainably released. All findings suggest that this strategy is a feasible and advantageous process to obtain chitin-based 3D structures with both functional and structural characteristics that make then suitable for regenerative medicine applications.

Alves, Raquel D., Lu\'ısa C. Rodrigues, Juliana R. Andrade, Mariana Fernandes, Joana V. Pinto, Lu\'ıs Pereira, Agnieszka Pawlicka, Rodrigo Martins, Elvira Fortunato, Verónica {de Zea Bermudez}, and Maria Manuela Silva. "{Gelatin n Zn(CF 3 SO 3 ) 2 Polymer Electrolytes for Electrochromic Devices}." Electroanalysis. 25 (2013): 1483-1490. AbstractWebsite
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Gawande, Manoj B., Anuj K. Rathi, Paula S. Branco, T. M. Potewar, Alexandre Velhinho, Isabel D. Nogueira, Alexander Tolstoguzov, Amjad C. A. Ghumman, and Orlando M. N. D. Teodoro. "{Nano-MgO-ZrO2 Mixed Metal oxides: Characterization by SIMS and application in the reduction of carbonyl compounds and in multicomponent reactions}." RSC Advances. 3 (2013): 3611-3617. Abstract

A nano-sized Magnesia–Zirconia (nano-MgO–ZrO2) catalyst was prepared by a simple ultradilution co-precipitation method and by using inexpensive precursors. The nano-MgO–ZrO2 was extensively characterized by SIMS together with other analytical techniques such as X-ray diffraction (XRD) and transmission electron microscopy (TEM). The nano-MgO–ZrO2 catalyst proved to be very efficient for the reduction of carbonyl compounds and multicomponent reactions under mild reaction conditions. The recyclability and reusability of the nano-MgO–ZrO2 catalyst has been tested.

Fernandes-Silva, S., J. Moreira-Silva, T. H. Silva, R. I. Perez-Martin, C. G. Sotelo, J. F. Mano, A. R. C. Duarte, and R. L. Reis. "{Porous hydrogels from shark skin collagen crosslinked under dense carbon dioxide atmosphere}." Macromolecular Bioscience. 13 (2013). Abstract

The possibility to fabricate marine collagen porous structures crosslinked with genipin under high pressure carbon dioxide is investigated. Collagen from shark skin is used to prepare pre-scaffolds by freeze-drying. The poor stability of the structures and low mechanical properties require crosslinking of the structures. Under dense CO 2 atmosphere, crosslinking of collagen pre-scaffolds is allowed for 16 h. Additionally, the hydrogels are foamed and the scaffolds obtained present a highly porous structure. In vitro cell culture tests performed with a chondrocyte-like cell line show good cell adherence and proliferation, which is a strong indication of the potential of these scaffolds to be used in tissue cartilage tissue engineering. The development of an optimized processing technique for the preparation of stable structures from marine origin collagen is described. The samples are processed under a dense carbon dioxide atmosphere that promotes crosslinking and enhances the morphology of the 3D architectures obtained. © 2013 WILEY-VCH Verlag GmbH {&} Co. KGaA, Weinheim.

a.M. Ramos, S. Pereira, M. T. Cidade, G. Pereira, R. Branquinho, L. Pereira, R. Martins, and E. Fortunato. "{Preparation and characterization of cellulose nanocomposite hydrogels as functional electrolytes}." Solid State Ionics. 242 (2013): 26-32. AbstractWebsite
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Ramos, A. M., S. Pereira, M. T. Cidade, G. Pereira, R. Branquinho, L. Pereira, R. Martins, and E. Fortunato. "{Preparation and characterization of cellulose nanocomposite hydrogels as functional electrolytes}." Solid State Ionics. 242 (2013): 26-32. AbstractWebsite

In this work Laponite was combined with a modified abundant natural polymer, (caboxymethyl cellulose), acrylic sodium salt polymer and lithium perchlorate aiming to produce inexpensive and sustainable nanocomposite electrolytes for functional electrochemical devices. Optical, electrochemical, structural, morphological and rheological characterization was performed in order to evaluate their properties and potential advantages as electrolyte. It was verified that the addition of Laponite led to an ionic conductivity at room temperature (25 C) in the range of 6 to 9 ?? 10- 5 Scm - 1 this value being then determined by the composition of the nanocomposite. These electrolytes were applied to electrochromic devices using evaporated nickel oxide thin film as the electrochromic layer. The devices exhibited a significant transmittance modulation that exceeds 45 {%} at 600 nm. ?? 2013 Elsevier B.V.

Engineering, Tissue, Cell Based, Campus D. E. Gualtar, Maria Manuela, Estima Gomes, A. N. A. Rita, Cruz Duarte, Sentido D. E. Fornecer, U. M. A. Estrutura, Porosa E. Interconectada, and Suporte D. E. A. O. Crescimento. "{PT 106220}." 106220 (2013). Abstract
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Engineering, Tissue, Cell Based, Campus D. E. Gualtar, Maria Manuela, Estima Gomes, A. N. A. Rita, Cruz Duarte, Sentido D. E. Fornecer, U. M. A. Estrutura, Porosa E. Interconectada, and Suporte D. E. A. O. Crescimento. "{PT 106220}." 106220 (2013). Abstract
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Mendes, Manuel J., Estela Hernández, Esther López, Pablo García-Linares, Iñigo Ramiro, Irene Artacho, Elisa Antolín, Ignacio Tobías, Antonio Martí, and Antonio Luque. "{Self-organized colloidal quantum dots and metal nanoparticles for plasmon-enhanced intermediate-band solar cells}." Nanotechnology. 24 (2013): 345402. AbstractWebsite

A colloidal deposition technique is presented to construct long-range ordered hybrid arrays of self-assembled quantum dots and metal nanoparticles. Quantum dots are promising for novel opto-electronic devices but, in most cases, their optical transitions of interest lack sufficient light absorption to provide a significant impact in their implementation. A potential solution is to couple the dots with localized plasmons in metal nanoparticles. The extreme confinement of light in the near-field produced by the nanoparticles can potentially boost the absorption in the quantum dots by up to two orders of magnitude. In this work, light extinction measurements are employed to probe the plasmon resonance of spherical gold nanoparticles in lead sulfide colloidal quantum dots and amorphous silicon thin-films. Mie theory computations are used to analyze the experimental results and determine the absorption enhancement that can be generated by the highly intense near-field produced in the vicinity of the gold nanoparticles at their surface plasmon resonance. The results presented here are of interest for the development of plasmon-enhanced colloidal nanostructured photovoltaic materials, such as colloidal quantum dot intermediate-band solar cells.

Martí, Antonio, Elisa Antolín, Pablo {García Linares}, Iñigo Ramiro, Irene Artacho, Esther López, Estela Hernández, Manuel J. Mendes, Alex Mellor, Ignacio Tobías, David {Fuertes Marrón}, Cesar Tablero, Ana B. Cristóbal, Christopher G. Bailey, Maria Gonzalez, Michael Yakes, Mathew P. Lumb, Robert Walters, and Antonio Luque. "{Six not-so-easy pieces in intermediate band solar cell research}." Journal of Photonics for Energy. 3 (2013): 31299. AbstractWebsite

Abstract.  The concept of intermediate band solar cell (IBSC) is, apparently, simple to grasp. However, since the idea was proposed, our understanding has improved and some concepts can now be explained more clearly than when the concept was initially introduced. Clarifying these concepts is important, even if they are well known for the advanced researcher, so that research efforts can be driven in the right direction from the start. The six pieces of this work are: Does a miniband need to be formed when the IBSC is implemented with quantum dots? What are the problems for each of the main practical approaches that exist today? What are the simplest experimental techniques to demonstrate whether an IBSC is working as such or not? What is the issue with the absorption coefficient overlap and the Mott's transition? What would the best system be, if any?

Alves, R. D., L. C. Rodrigues, J. R. Andrade, A. Pawlicka, L. Pereira, R. Martins, E. Fortunato, and M. M. Silva. "{Study and Characterization of a Novel Polymer Electrolyte Based on Agar Doped with Magnesium Triflate}." Molecular Crystals and Liquid Crystals. 570 (2013): 1-11. AbstractWebsite
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Duarte, Ana Rita C., Vitor E. Santo, Anabela Alves, Simone S. Silva, Joana Moreira-Silva, Tiago H. Silva, Alexandra P. Marques, Rui A. Sousa, Manuela E. Gomes, João F. Mano, and Rui L. Reis. "{Unleashing the potential of supercritical fluids for polymer processing in tissue engineering and regenerative medicine}." Journal of Supercritical Fluids. 79 (2013): 177-185. AbstractWebsite

One of the major scientific challenges that tissue engineering and regenerative medicine (TERM) faces to move from benchtop to bedside regards biomaterials development, despite the latest advances in polymer processing technologies. A variety of scaffolds processing techniques have been developed and include solvent casting and particles leaching, compression molding and particle leaching, thermally induced phase separation, rapid prototyping, among others. Supercritical fluids appear as an interesting alternative to the conventional methods for processing biopolymers as they do not require the use of large amounts of organic solvents and the processes can be conducted at mild temperatures. However, this processing technique has only recently started to receive more attention from researchers. Different processing methods based on the use of supercritical carbon dioxide have been proposed for the creation of novel architectures based on natural and synthetic polymers and these will be unleashed in this paper. © 2013 Elsevier B.V. All rights reserved.

Duarte, Ana Rita C., Vitor E. Santo, Anabela Alves, Simone S. Silva, Joana Moreira-Silva, Tiago H. Silva, Alexandra P. Marques, Rui A. Sousa, Manuela E. Gomes, João F. Mano, and Rui L. Reis. "{Unleashing the potential of supercritical fluids for polymer processing in tissue engineering and regenerative medicine}." Journal of Supercritical Fluids. 79 (2013): 177-185. AbstractWebsite

One of the major scientific challenges that tissue engineering and regenerative medicine (TERM) faces to move from benchtop to bedside regards biomaterials development, despite the latest advances in polymer processing technologies. A variety of scaffolds processing techniques have been developed and include solvent casting and particles leaching, compression molding and particle leaching, thermally induced phase separation, rapid prototyping, among others. Supercritical fluids appear as an interesting alternative to the conventional methods for processing biopolymers as they do not require the use of large amounts of organic solvents and the processes can be conducted at mild temperatures. However, this processing technique has only recently started to receive more attention from researchers. Different processing methods based on the use of supercritical carbon dioxide have been proposed for the creation of novel architectures based on natural and synthetic polymers and these will be unleashed in this paper. © 2013 Elsevier B.V. All rights reserved.

2012
Gomes, Gabriela M. M., Ricardo Aguas, Joao S. Lopes, Marta C. Nunes, Carlota Rebelo, Paula Rodrigues, and Claudio J. Struchiner. "How host heterogeneity governs tuberculosis reinfection?" PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES. 279 (2012): 2473-2478. Abstract

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Bruno Pedras, Vitor Rosa, Richard Welter, Carlos Lodeiro, and Teresa Aviles. "{New quinoline alpha-diimine ligands as fluorescent probes for metal ions: Ultrasound-assisted and conventional synthetic methods}." {INORGANICA CHIMICA ACTA}. {381} (2012): {143-149}. Abstract

{Three new emissive 8-aminoquinoline derived probes (1)-(3) and one dinuclear Zn(II) complex (4) were synthesized and fully characterized. Their absorption spectra show maxima at 310-336 nm, and fluorescence emission between 456 and 498 nm. Compound (1) was characterized by single crystal X-ray diffraction. The effect upon Zn(II) and Cu(II) coordination to compounds (1)-(3) was studied by monitoring the changes in absorption and fluorescence spectra, and complemented by calculation of metal-ligand stability constants. The results indicate that compound (3) is the one that presents the most favorable geometry for coordinating two metal cations, fact that is confirmed by the synthesis of the dinuclear complex (4), with similar molecular geometry. (C) 2011 Elsevier B.V. All rights reserved.}

Vitor Rosa, Sara Realista, Ana Mourato, Luisa Maria Abrantes, Joao Henriques, Maria Jose Calhorda, Teresa Aviles, Michael G. B. Drew, and Vitor Felix. "{1,1 `-Bis(diphenylphosphino)ferrocene bridging two mono(cyclopentadienyl) cobalt moieties: Synthesis, structure, electrochemistry and DFT studies}." {JOURNAL OF ORGANOMETALLIC CHEMISTRY}. {712} (2012): {52-56}. Abstract

{Reaction of {[}Co(eta(5)-C5H5)(CO)(2)], 1, with 1,1'-bis(diphenylphosphino)ferrocene (dppf) yields the new trinuclear complex {[}Co(eta(5)-C5H5)(CO)](2)(mu-dppf), 2, which was structurally characterised by single crystal X-ray diffraction and showed two Co(eta(5)-C5H5)(CO) moieties covalently linked by a dppf bridge. Electrochemical studies in dichloromethane revealed that both Co(I) and Fe(II) in the precursors were oxidized to Co(II)/Co(III) and Fe(III), respectively. On the other hand, in 2 the two first oxidation waves were assigned to Co, the Fe(II) centre requiring a higher potential than in free dppf. DFT calculations showed that the HOMOs of 2 were localised in the Co fragments, owing to the destabilisation of the Co(eta(5)-C5H5)(CO) orbitals after binding dppf. (C) 2012 Elsevier B.V. All rights reserved.}

Guimarães, Diana, Maria Luisa Carvalho, Vera Geraldes, Isabel Rocha, Luís Cerqueira Alves, and Jose Paulo Santos. "Lead in liver and kidney of exposed rats: Aging accumulation study." J. Trace Elem. Med Biol.. 26 (2012): 285. AbstractWebsite

The concentration of lead in liver and kidneys of Wistar rats, fed with lead since fetal period in relation to their age and to a control group, was determined. A group of rats was exposed to lead acetate (n=30) in drinking water and the other group was exposed to normal water (n=20). Samples were collected from rats aging between 1 and 11 months and were analyzed by Energy Dispersive X-ray Fluorescence (EDXRF) without any chemical preparation. The EDXRF results were assessed by the PIXE (Proton Induced X-ray Emission) technique. The formaldehyde used to preserve the samples was also analyzed by ETAAS (Electro-Thermal Atomic Absorption Spectrometry) in order to verify if there was any loss of lead from the samples to the formaldehyde. We found that the loss was not significant (<2%). Concerning the mean values of the lead concentration measured in the contaminated soft tissues, in liver they range from 6 to 22μgg(-1), and in kidneys from 44 to 79μgg(-1). The control rats show, in general, values below the EDXRF detection limit (2μgg(-1)). The ratio kidney/liver ranges from 2 to 10 and is strongly positively correlated with the age of the animals. A Spearman correlation matrix to investigate the correlation between elemental concentrations and the dependence of these concentrations with age showed that there is a strong positive correlation with age for lead in the liver but not in the kidney. The correlation matrix showed also that the concentration of lead in these two soft tissues is not correlated. The lead accumulation in liver is made by different plateaus that strongly decrease with age. It was verified the existence of two levels of accumulation in kidney, not very highlighted, which might be indicative of a maximum accumulation level for lead in kidney.

Guimarães, Diana, Maria Luisa Carvalho, Vera Geraldes, Isabel Rocha, Luís Cerqueira Alves, and Jose Paulo Santos. "Lead in liver and kidney of exposed rats: Aging accumulation study." Journal of Trace Elements in Medicine and Biology. 26 (2012): 285. AbstractWebsite

The concentration of lead in liver and kidneys of Wistar rats, fed with lead since fetal period in relation to their age and to a control group, was determined. A group of rats was exposed to lead acetate (n=30) in drinking water and the other group was exposed to normal water (n=20). Samples were collected from rats aging between 1 and 11 months and were analyzed by Energy Dispersive X-ray Fluorescence (EDXRF) without any chemical preparation. The EDXRF results were assessed by the PIXE (Proton Induced X-ray Emission) technique. The formaldehyde used to preserve the samples was also analyzed by ETAAS (Electro-Thermal Atomic Absorption Spectrometry) in order to verify if there was any loss of lead from the samples to the formaldehyde. We found that the loss was not significant (<2%). Concerning the mean values of the lead concentration measured in the contaminated soft tissues, in liver they range from 6 to 22μgg(-1), and in kidneys from 44 to 79μgg(-1). The control rats show, in general, values below the EDXRF detection limit (2μgg(-1)). The ratio kidney/liver ranges from 2 to 10 and is strongly positively correlated with the age of the animals. A Spearman correlation matrix to investigate the correlation between elemental concentrations and the dependence of these concentrations with age showed that there is a strong positive correlation with age for lead in the liver but not in the kidney. The correlation matrix showed also that the concentration of lead in these two soft tissues is not correlated. The lead accumulation in liver is made by different plateaus that strongly decrease with age. It was verified the existence of two levels of accumulation in kidney, not very highlighted, which might be indicative of a maximum accumulation level for lead in kidney.