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2015
Galveia, Bruno, Tiago Cardoso, Vitor Santor, and Yves Rybarczyk. "Towards the creation of a gesture library." EAI Endorsed Transactions on Creative Technologies. 2 (2015): 1-8. Abstract

The evolution of technology has risen new possibilities in the so called Natural User Interfaces research area. Among distinct initiatives, several researchers are working with the existing sensors towards improving the support to gesture languages. This article tackles the recognition of gestures, using the Kinect sensor, in order to create a gesture library and support the gesture recognition processes afterwards.

Maia, Pedro, Jorge Mendes, Jácome Cunha, Henrique Rebêlo, and João Saraiva. "Towards the Design and Implementation of Aspect-Oriented Programming for Spreadsheets." Proceedings of the 2nd Workshop on Software Engineering methods in Spreadsheets co-located with the 37th International Conference on Software Engineering (ICSE 2015). Eds. Felienne Hermans, Richard F. Paige, and Peter Sestof. SEMS '15. 2015. Abstractsems15.pdf

A spreadsheet usually starts as a simple and single- user software artifact, but, as frequent as in other software systems, quickly evolves into a complex system developed by many actors. Often, different users work on different aspects of the same spreadsheet: while a secretary may be only involved in adding plain data to the spreadsheet, an accountant may define new business rules, while an engineer may need to adapt the spreadsheet content so it can be used by other software systems. Unfortunately, spreadsheet systems do not offer modular mechanisms, and as a consequence, some of the previous tasks may be defined by adding intrusive “code” to the spreadsheet.

In this paper we go through the design and implementation of an aspect-oriented language for spreadsheets so that users can work on different aspects of a spreadsheet in a modular way. For example, aspects can be defined in order to introduce new business rules to an existing spreadsheet, or to manipulate the spreadsheet data to be ported to another system. Aspects are defined as aspect-oriented program specifications that are dynamically woven into the underlying spreadsheet by an aspect weaver. In this aspect-oriented style of spreadsheet development, different users develop, or reuse, aspects without adding intrusive code to the original spreadsheet. Such code is added/executed by the spreadsheet weaving mechanism proposed in this paper.

Young, M. T., S. Hua, L. Steel, D. Foffa, S. L. Brusatte, S. Thüring, O. Mateus, J. I. Ruiz-Omeñaca, P. Havlik, Y. Lepage, and M. B. De Andrade. "Addendum to ?Revision of the Late Jurassic teleosaurid genus Machimosaurus (Crocodylomorpha, Thalattosuchia)?" Royal Society Open Science. 2 (2015). Abstract
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Rocha, Andre Dionisio, Ricardo Peres, and Jose Barata. "An agent based monitoring architecture for plug and produce based manufacturing systems." Industrial Informatics (INDIN), 2015 IEEE 13th International Conference on. IEEE, 2015. 1318-1323. Abstract
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Quirós, Jennifer, João P. Borges, Karina Boltes, Ismael Rodea-Palomares, and Roberto Rosal. "Antimicrobial electrospun silver-, copper-and zinc-doped polyvinylpyrrolidone nanofibers." Journal of hazardous materials. 299 (2015): 298-305. Abstract
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Correia, H. D., J. Marangon, CD Brondino, JJG Moura, MJ Romão, P. J. González, and T. Santos-Silva. "Aromatic aldehydes at the active site of aldehyde oxidoreductase from Desulfovibrio gigas: Reactivity and molecular details of the enzyme-substrate and enzyme-product interaction." Journal of Biological Inorganic Chemistry. 20 (2015): 219-229. Abstract
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Correia, Hugo D., Jacopo Marangon, Carlos D. Brondino, Jose J. G. Moura, Maria J. Romao, Pablo J. Gonzalez, and Teresa Santos-Silva. "Aromatic aldehydes at the active site of aldehyde oxidoreductase from Desulfovibrio gigas: reactivity and molecular details of the enzyme-substrate and enzyme-product interaction (vol 20, pg 219, 2015)." Journal of Biological Inorganic Chemistry. 20 (2015): 231. Abstract
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Pinto, V. C., Tiago Ramos, Sofia Alves, J. Xavier, Paulo Tavares, P. M. G. P. Moreira, and Rui Miranda Guedes. "Comparative Failure Analysis of PLA, PLA/GNP and PLA/CNT-COOH Biodegradable Nanocomposites thin Films." Procedia Engineering. 114 (2015): 635-642. AbstractWebsite

Abstract Biodegradable polymers such as poly(lactic) acid (PLA) have been studied for biomaterials applications such as natural human ligament replacement, however these materials could be applied to other sectors as aerospace, aeronautics, automotive, food packaging. \{PLA\} presents a relatively brittle with a mode I fracture behavior, being often blend with other biodegradable or non-degradable polymers to improve its fracture energy. For some existing applications, \{PLA\} components exhibit accumulated permanent deformation resulting from dynamic mechanical inputs, resulting on failure by laxity of parts. Aiming the improvement of \{PLA\} mechanical properties, the inclusion of carbon nanofillers into \{PLA\} matrix, in particular, CNT-COOH and \{GNP\} have been developed, due to their strong sp2 carbon-carbon bondings and their geometric arrangement that enhance mechanical properties of the polymer matrix. \{PLA\} and nanocomposites were produced by melt blending followed by compression molding in a hot press, with small weight percentages of nanofillers added to the matrix. Quasi static tensile tests were performed on a mechanical testing machine (Instron™ ElectroPuls E1000) along with failure analysis of specimens with centered crack with digital image correlation, revealing strain distribution along specimens.

Gabriel, A., J. Machado, R. Gomes, J. M. P. Coelho, C. O. Silva, C. P. Reis, J. P. Santos, and P. Vieira. "Concentrated photoactivation: focusing light through scattering." World Congress on Medical Physics and Biomedical Engineering, June 7-12, 2015, Toronto, Canada. Ed. David A. Jaffray. Cham: Springer International Publishing, 2015. 1727-1730. Abstract

Light has long being used in medicine; however, the high scattering of biological tissues always hindered its use. The aim of this work is the development of methodologies to focus light inside biological tissues. Geant4/GAMOS Monte Carlo platform was used to simulate the possibility of parameterize the time delay of multiple sources of external light, offset in time, as a function of the interest region position in order to create constructive interferences in a breast sample. A computational model was implemented and the platform was configured in order to perform these simulations. Preliminary results using a single light source were performed. It was concluded that scattering in adipose tissue is very high which is consistent with previous studies.

Veiga, Catarina, Jailan Alshaikhi, Richard Amos, Ana Mónica Lourenço, Marc Modat, Sebastien Ourselin, Gary Royle, and Jamie R. McClelland. "Cone-Beam Computed Tomography and Deformable Registration-Based “Dose of the Day” Calculations for Adaptive Proton Therapy." International Journal of Particle Therapy. 2 (2015): 404-414. AbstractWebsite
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Seixas, Joao D., Marino F. A. Santos, Abhik Mukhopadhyay, Ana C. Coelho, Patricia M. Reis, Luis F. Veiros, Ana R. Marques, Nuno Penacho, Ana M. L. Goncalves, Maria J. Romao, Goncalo J. L. Bernardes, Teresa Santos-Silva, and Carlos C. Romao. "A contribution to the rational design of Ru(CO)(3)Cl2L complexes for in vivo delivery of CO." Dalton Transactions. 44 (2015): 5058-5075. Abstract
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Dias, Filipe S., Miguel N. Bugalho, Patricia M. Rodríguez-González, António Albuquerque, and Orestes J. Cerdeira. "Effects of forest certification on the ecological condition of Mediterranean streams." Journal of Applied Ecology. 52 (2015): 190-198. AbstractWebsite
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Nico, C. a, R. a Fernandes, M. P. F. a Graça, M. a Elisa, B. A. b Sava, R. C. C. c Monteiro, L. a Rino, and T. a Monteiro. "Erratum: Eu3+ luminescence in aluminophosphate glasses (Journal of Luminescence (2014) 145 (582-587))." Journal of Luminescence. 161 (2015): 465. AbstractWebsite
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Freire, D. M., M. G. Rivas, A. M. Dias, A. T. Lopes, C. Costa, T. Santos-Silva, S. Van Doorslaer, and P. J. González. "The homopentameric chlorite dismutase from Magnetospirillum sp." Journal of Inorganic Biochemistry. 151 (2015): 1-9. Abstract
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Marzola, M., J. Russo, and O. Mateus. "Identification and comparison of modern and fossil crocodilian eggs and eggshell structures." Historical Biology. 27 (2015): 115-133. Abstract
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Kowacz, M., M. Marchel, L. Juknaite, Jmss Esperanca, MJ Romao, AL Carvalho, and L. P. N. Rebelo. "Ionic-Liquid-Functionalized Mineral Particles for Protein Crystallization." Crystal Growth & Design. 15 (2015): 2994-3003. AbstractWebsite

Nucleation is a critical step determining the outcome of the entire crystallization process. Finding an effective nucleant for protein crystallization is of utmost importance for structural biology. The latter relies on good-quality crystals to solve the three-dimensional structures of macromolecules. In this study we show that crystalline barium sulfate (BaSO4) with an etched and/or ionic liquid (IL)-functionalized surface (1) can induce protein nucleation at concentrations well below the concentration needed to promote crystal growth under control conditions, (2) can shorten the nucleation time, (3) can increase the growth rate, and finally (4) may help to improve the protein crystal morphology. These effects were shown for lysozyme, RNase A, trypsin, proteinase K, myoglobin, and hemoglobin. Therefore, the use of BaSO4 particles enables us to reduce the amount of protein in crystallization trials and increases the chance of obtaining protein crystals of the desired quality. In the context of the underlying mechanism, it is shown that the protein-solid contact formation is governed by the interaction of the polar compartments of the biomacromolecule with the support. The tendency of a protein to concentrate near the solid surface is enhanced by both the hydrophobicity of the protein and that of the surface (tuned by the functionalizing IL). These mechanisms of interaction of biomacromolecules with inorganic hydrophilic solids correspond to the principles of amphiphilic IL-mineral interactions.

De Schutter, Amy, Hugo D. Correia, Diana M. Freire, Maria G. Rivas, Alberto Rizzi, Teresa Santos-Silva, Pablo J. Gonzalez, and Sabine Van Doorslaer. "Ligand Binding to Chlorite Dismutase from Magnetospirillum sp." Journal of Physical Chemistry B. 119 (2015): 13859-13869. Abstract
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Pereira, B. C., M. J. Benton, M. Ruta, and O. Mateus. "Mesozoic echinoid diversity in Portugal: Investigating fossil record quality and environmental constraints on a regional scale." Palaeogeography, Palaeoclimatology, Palaeoecology. 424 (2015): 132-146. Abstract
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Rocha, André Dion{\'ısio, Ricardo Silva Peres, Luis Flores, and Jose Barata. "A multiagent based knowledge extraction framework to support plug and produce capabilities in manufacturing monitoring systems." Mechatronics and its Applications (ISMA), 2015 10th International Symposium on. IEEE, 2015. 1-5. Abstract
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Echeverria, Coro, Paula Soares, Ana Robalo, Laura Pereira, Carlos M. M. Novo, Isabel Ferreira, and João Paulo Borges. "One-pot synthesis of dual-stimuli responsive hybrid PNIPAAm-chitosan microgels." Materials & Design. 86 (2015): 745-751. Abstract
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Rodrigues, J.a, Mata Pimentel Nunes Martins Fortunato Neves Monteiro Costa D. a A. b. "One-step synthesis of ZnO decorated CNT buckypaper composites and their optical and electrical properties." Materials Science and Engineering B: Solid-State Materials for Advanced Technology. 195 (2015): 38-44. AbstractWebsite

ZnO/CNT composites were prepared using ZnO nanoparticles and tetrapods synthesized by the Laser Assisted Flow Deposition method. The co-operative behaviour between these two materials may give rise to the production of advanced functional materials with a wide range of applications in electronics and optoelectronics. Despite some degree of aggregation in the case of the nanoparticles, scanning electron microscopy images evidence that the produced ZnO structures are well dispersed in the CNT buckypapers. Independent of the ZnO morphology the samples resistivity was shown to be of the order of ∼10-1 Ω cm while in the case of the electron mobility, the composite with tetrapods reveals a lower value than the ones obtained for the remaining samples. Well-structured ZnO luminescence was observed mainly in ultraviolet highlighting the high optical quality of the produced structures. The temperature dependence of the luminescence reveals a distinct trend for the composites with ZnO tetrapods and ZnO nanoparticles. © 2015 Elsevier B.V.

Xing, L., M. G. Lockley, D. Marty, J. Zhang, Y. Wang, H. Klein, R. T. McCrea, L. G. Buckley, M. Belvedere, O. Mateus, G. D. Gierli?ski, L. Piñuela, W. S. Persons, F. Wang, H. Ran, H. Dai, and X. Xie. "An ornithopod-dominated tracksite from the lower Cretaceous Jiaguan Formation (Barremian-Albian) of Qijiang, South-Central China: New discoveries, ichnotaxonomy, preservation and palaeoecology." PLoS ONE. 10 (2015). Abstract
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d Ruivo, C.R.a b, Vaz D. C. c. "Prediction of the heat gain of external walls: An innovative approach for full-featured excitations based on the simplified method of Mackey-and-Wright." Applied Energy. 155 (2015): 378-392. AbstractWebsite

Nowadays, simulation tools are available for calculating the thermal loads of multiple rooms of buildings, for given inputs. However, due to inaccuracies or uncertainties in some of the input data (e.g., thermal properties, air infiltrations flow rates, building occupancy), the evaluated thermal load may represent no more than just an estimate of the actual thermal load of the spaces. Accordingly, in certain practical situations, simplified methods may offer a more reasonable trade-off between effort and results accuracy than advanced software. Hence, despite the advances in computing power over the last decades, simplified methods for the evaluation of thermal loads are still of great interest nowadays, for both the practicing engineer and the graduating student, since these can be readily implemented or developed in common computational-tools, like a spreadsheet.The method of Mackey and Wright (M&W) is a simplified method that upon values of the decrement factor and time lag of a wall (or roof) estimates the instantaneous rate of heat transfer through its indoor surface. It assumes cyclic behaviour and shows good accuracy when the excitation and response have matching shapes, but it involves non negligible error otherwise, for example, in the case of walls of high thermal inertia.The aim of this study is to develop a simplified procedure that considerably improves the accuracy of the M&W method, particularly for excitations that noticeably depart from the sinusoidal shape, while not introducing a need for an excessive volume of data or complexity in the production of results.In the first simplified procedure discussed in the paper, a full-featured excitation is decomposed into a Fourier series and then the wall's thermal behaviour is reconstructed from the application of the M&W method to each of the N sinusoidal components. Even though this established approach can lead to the most accurate results, given a sufficiently high N, it requires the knowledge of the decrement factor and time lag associated to each component of the Fourier series, which can represent a considerable amount of data.The chief result of the research though is a novel procedure based on a parameter, γ, that weigh-averages the approximate solution obtained by considering a single term Fourier decomposition of the excitation and the solution by considering the actual excitation. The procedure is more accurate than the original M&W method and will be of interest to researchers with the means of generating values of γ for the walls which the end users of their research are interested in. It provides promising results for walls ranging from massive to negligible mass. It has been noticed that while using the same values of γ that had been optimized for the wall facing east, acceptable results are also obtained when altered external excitations are imposed, namely due to intermittency of the direct solar radiation or due to a distinct value of the external heat transfer coefficient. © 2015 Elsevier Ltd.