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2012
Wojcik, Pawel Jerzy, Ana Sofia Cruz, L\'ıdia Santos, Lu\'ıs Pereira, Rodrigo Martins, and Elvira Fortunato. "{Microstructure control of dual-phase inkjet-printed a-WO3/TiO2/WOX films for high-performance electrochromic applications}." Journal of Materials Chemistry. 22 (2012): 13268. AbstractWebsite
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Fortunato, E., P. Barquinha, and R. Martins. "{Oxide Semiconductor Thin-Film Transistors: A Review of Recent Advances}." Advanced Materials. 24 (2012): 2945-2986. Abstract
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Figueiredo, V., E. Elangovan, R. Barros, JV Pinto, T. Busani, R. Martins, and Elvira Fortunato. "{p-Type Cu x O Films Deposited at Room Temperature for Thin-Film Transistors}." Journal of Display Technology. 8 (2012): 41-47. Abstract

Thin-films of copper oxide @Cu OA were sputtered from a metallic copper (Cu) target and studied as a function of oxygen partial pressure @O??A. A metallic Cu film with cubic structure obtained from 0{%} O?? has been transformed to cubic CuPO phase for the increase in O?? to 9{%} but then changed to monoclinic CuO phase (for O?? PS7). The variation in crystallite size (calculated from x-ray diffraction data) was further substantiated by the variation in grain size (surface microstruc- tures). The Cu O films produced with O?? ranging between 9{%} and 75{%} showed p-type behavior, which were successfully applied to produce thin-film transistors.

Alves, Anabela, Ana Rita C. Duarte, João F. Mano, Rui A. Sousa, and Rui L. Reis. "{PDLLA enriched with ulvan particles as a novel 3D porous scaffold targeted for bone engineering}." Journal of Supercritical Fluids. 65 (2012): 32-38. AbstractWebsite

A marine derived polysaccharide, ulvan, extracted from green algae, was combined with poly-d, l-lactic acid (PDLLA) in order to produce a novel scaffold for bone tissue engineering applications. Three dimensional (3D) scaffolds of PDLLA loaded with ulvan particles were originally prepared by subcritical fluid sintering with carbon dioxide at 40°C and 50 bar. Prepared matrixes were characterized in order to validate their suitability to be used as scaffolds for bone tissue regeneration. Characterization included micro-computed tomography, mechanical compression testing, water uptake and degradation testing, and cytotoxicity assays. In addition, ulvan particles loaded with dexamethasone, were also dispersed within the PDLLA matrix and the respective release profile from the samples was evaluated. Prepared PDLLA scaffolds enriched with ulvan particles demonstrated appropriate physicochemical and cytocompatible features to be used for the envisaged applications. On the other hand, the release of dexamethasone from ulvan particles embedded within the PDLLA matrix revealed that the designed systems can be potentially suitable for localized drug delivery. These results further contribute to the establishment of ulvan as a potential novel biomaterial. © 2012 Elsevier B.V. All rights reserved.

Alberti, M., R. Ayouchi, S. R. Bhattacharyya, N. Bundaleski, A. Moutinho, O. Teodoro, L. Aguilera, M. Taborelli, and R. Schwarz. "{Secondary electron emission yield (SEY) in amorphous and graphitic carbon films prepared by PLD}." Physica Status Solidi C. 3 (2012): 1-3. Abstract

High secondary emission yield (SEY), and the subse- quent build-up of a secondary electron cloud, may se- verely limit the stability of high-intensity particle beams inside particle accelerators. One of the best candidates of beam pipe coating for reduced SEY has been amorphous carbon (a-C) produced by direct current (D.C.) magne- tron sputtering. Here we used pulsed laser deposition (PLD), to prepare a-C films from a pure carbon target at substrate temperatures ranging from 300 K to 773 K. The ablating laser was a Nd:YAG system operating at 1064 nm wavelength. With increasing temperature the optical band gap dropped from about 2.1 eV to 1.0 eV. This trend indicates transition from predominantly a-C films to films with more graphitic content, which was also con- firmed by Raman measurements. SEY spectra were taken upto 1732 eV of primary electron energy. The maximum SEY value decreased from 1.9 in a-C films down to 1.4 in highly graphitic films deposited at higher temperatures

Martins, R. M. S., R. A. Castanhinha, O. Mateus, R. Araújo, F. Beckmann, and N. Schell. "{Synchrotron radiation-based techniques applied to the study of dinosaur fossils from the collection of the museum of Lourinhã." Ciencia e Tecnologia dos Materiais. 24 (2012): 153-156. Abstract
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Duarte, Ana Rita C., João F. Mano, and Rui L. Reis. "{The role of organic solvent on the preparation of chitosan scaffolds by supercritical assisted phase inversion}." Journal of Supercritical Fluids. 72 (2012): 326-332. Abstract

The aim of this study was to evaluate the possibility of preparing chitosan porous matrixes using supercritical fluid technology. Supercritical immersion precipitation technique was used to prepare scaffolds of a natural biocompatible polymer, chitosan for tissue engineering purposes. The physicochemical and biological properties of chitosan make it an excellent material for the preparation of drug delivery systems and for the development of new biomedical applications in many fields from skin to bone or cartilage. Supercritical assisted phase inversion experiments were carried out and the effect of different organic solvents on the morphology of the scaffolds was assessed. Chitosan scaffold morphology, porosity and pore size were evaluated by SEM and micro-CT. A thermodynamic analysis of the process was carried out and insights on the solubility parameter and Flory-Huggins interaction parameters are given. The preparation of a highly porous and interconnected structure of a natural material, chitosan, using a clean and environmentally friendly technology constitutes a new processing technology for the preparation of scaffolds for tissue engineering using these materials. © 2011 Elsevier B.V.

Turner, N. J., B. M. Sicari, T. J. Keane, R. Londono, P. M. Crapo, S. Tottey, R. Matsushima, Y. Shimatsu, K. Nam, T. Kimura, and T. Fujisato. "{Tissue Engineering and Regenerative Medicine}." Journal of Tissue Engineering and Regenerative Medicine. 6 (2012): 1-429. AbstractWebsite
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Ghumman, C. A. A., A. M. C. Moutinho, A. Santos, A. Tolstogouzov, and O. M. N. D. Teodoro. "{TOF-SIMS study of cystine and cholesterol stones}." Journal of Mass Spectrometry. 47 (2012): 547-551. Abstract

Two different human stones, cystine and cholesterol from the kidney and gall bladder, were examined by time-of-flight sec- ondary ion mass spectrometry using Ga+ primary ions as bombarding particles. The mass spectra of kidney stone were com- pared with those measured for the standard compounds, cystine and cysteine. Similar spectra were obtained for the stone and cystine. The most important identification was based on the existence of the protonated molecules [M+H]+ and deprotonated molecules [M-H]-. The presence of cystine salt was also revealed in the stone through the sodiated cystine [M+Na]+ and the associated fragments, which might be due to the patient treatment history. In the gallstone, the deprotonated molecules [M-H]+ of cholesterol along with relatively intense characteristic fragments [M-OH]+ were detected. Copyright © 2012 John Wiley & Sons, Ltd.

Ghumman, C. A. A., A. M. C. Moutinho, A. Santos, O. M. N. D. Teodoro, and A. Tolstogouzov. "{TOF-SIMS VG Ionex IX23LS : upgrade and application for the urinary stones analysis}." Applied Surface Science (2012). Abstract

TOF-SIMS VG Ionex IX23LS with upgraded data acquisition and control system was used to study the real urinary stones along with calcium oxalate (COX) and four different calcium phosphate (CP) references. Reliable phase identification of CPs was achieved in the positive SIMS mode on basis of the PO+/POH+ and CaPO2+/Ca2O+ peak ratios. In real urinary stones, pure COX was distinguished from calcium phosphates with confidence via the presence of its characteristic ion peaks. We also quantified the calcium phosphate in the human calculi containing calcium oxalate as major or minor component, which is of a great interest for medical community

2011
Karlovich, Alexei Yu., Helena Mascarenhas, and Pedro A. Santos. "Erratum to: Finite section method for a Banach algebra of convolution type operators on Lp(R) with symbols generated by PC and SO (vol 37, pg 559, 2010)." Integral Equations and Operator Theory. 69.3 (2011): 447-449. AbstractWebsite

We correct Theorem 3.2 and Corollary 3.3 from [KMS]. This correction ammounts to the observation that the proof of the main result in [KMS] contains a gap in Lemma~10.6 for \(p\ne 2\). The results of [KMS] are true for \(p=2\).

Mancas, M., Madhkour R., De Beul D., Leroy J., Riche N., Rybarczyk Y., and Zajéga F. "Kinact: a saliency-based social game." QPSR of the Numediart Research Program. 4.3 (2011): 65-70.copy.pdf
Cunha, Jácome, João Paulo Fernandes, Jorge Mendes, and João Saraiva. "HaExcel: A Model-Based Spreadsheet Evolution System (Poster)." 2011 IEEE Symposium on Visual Languages and Human-Centric Computing. IEEE, 2011. Abstractposter.vlhcc11.png

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Figueiredo, Elin, Pedro Valerio, M. Fatima Araujo, Rui JC Silva, and Antonio M. Monge Soares. "Inclusions and metal composition of ancient copper-based artefacts: a diachronic view by micro-EDXRF and SEM-EDS." X-Ray Spectrometry. 40.5 (2011): 325-332. Abstract
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Folgosa, F., C. M. Cordas, J. A. Santos, AS Pereira, JJG Moura, P. Tavares, and I. Moura. "New spectroscopic and electrochemical insights on a class I superoxide reductase: evidence for an intramolecular electron-transfer pathway." Biochemical Journal. 438 (2011): 485-494. AbstractWebsite

SORs (superoxide reductases) are enzymes involved in bacterial resistance to reactive oxygen species, catalysing the reduction of superoxide anions to hydrogen peroxide. So far three structural classes have been identified. Class I enzymes have two ironcentre-containing domains. Most studies have focused on the catalytic iron site (centre II), yet the role of centre I is poorly understood. The possible roles of this iron site were approached by an integrated study using both classical and fast kinetic measurements, as well as direct electrochemistry. A new heterometallic form of the protein with a zinc-substituted centre I, maintaining the iron active-site centre II, was obtained, resulting in a stable derivative useful for comparison with the native all-iron from. Second-order rate constants for the electron transfer between reduced rubredoxin and the different SOR forms were determined to be 2.8 x 10(7) M(-1) . s(-1) and 1.3 x 10(6) M(-1) . s(-1) for SOR(Fe(IIII)-Fe(II)) and for SOR(Fe(IIII)-Fe(III)) forms respectively, and 3.2 x 10(6) M(-1) s(-1) for the SOR(Zn(II)-Fe(III)) form. The results obtained seem to indicate that centre I transfers electrons from the putative physiological donor rubredoxin to the catalytic active iron site (intramolecular process). In addition, electrochemical results show that conformational changes are associated with the redox state of centre I, which may enable a faster catalytic response towards superoxide anion. The apparent rate constants calculated for the SOR-mediated electron transfer also support this observation.

Martins, Rodrigo, Arokia Nathan, Raquel Barros, Luis Pereira, Pedro Barquinha, Nuno Correia, Ricardo Costa, Arman Ahnood, Isabel Ferreira, and Elvira Fortunato. "Complementary Metal Oxide Semiconductor Technology With and On Paper." Advanced Materials. 23 (2011): 4491-+. AbstractWebsite
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Elangovan, E., K. J. Saji, S. Parthiban, G. GONCALVES, P. Barquinha, R. Martins, and E. Fortunato. "Thin-Film Transistors Based on Indium Molybdenum Oxide Semiconductor Layers Sputtered at Room Temperature." Ieee Electron Device Letters. 32 (2011): 1391-1393. AbstractWebsite
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Martins, Rodrigo, Arokia Nathan, Raquel Barros, Lu\'ıs Pereira, Pedro Barquinha, Nuno Correia, Ricardo Costa, Arman Ahnood, Isabel Ferreira, and Elvira Fortunato. "{Complementary metal oxide semiconductor technology with and on paper.}." Advanced materials (Deerfield Beach, Fla.). 23 (2011): 4491-6. AbstractWebsite
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Moniz, António, and José Miquel Cabeças. "Editorial Note." Enterprise and Work Innovation Studies. 7 (2011): 7-8. AbstractWebsite

No abstract is available for this item.

Almeida, R. M., C. F. Geraldes, S. R. Pauleta, and J. J. Moura. "Gd(III) chelates as NMR probes of protein-protein interactions. Case study: rubredoxin and cytochrome c3." Inorg Chem. 50 (2011): 10600-7. AbstractWebsite

Two cyclen-derived Gd probes, [Gd-DOTAM](3+) and [Gd-DOTP](5-) (DOTAM = 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetraacetamide; DOTP = 1,4,7,10-tetraazacyclododecane-1,4,7,10-tetrakis(methylenephosphonate)), were assessed as paramagnetic relaxation enhancement (PRE)-inducing probes for characterization of protein-protein interactions. Two proteins, Desulfovibrio gigas rubredoxin and Desulfovibrio gigas cytochrome c(3), were used as model partners. In a (1)H NMR titration it was shown that [Gd-DOTP](5-) binds to cytochrome c(3) near heme IV, causing pronounced PREs, characterized by line width broadenings of the heme methyl resonances at ratios as low as 0.08. A K(d) of 23 +/- 1 muM was calculated based on chemical shift perturbation of selected heme methyl resonances belonging to three different heme groups, caused by allosteric effects upon [Gd-DOTP](5-) binding to cytochrome c(3) at a molar ratio of 2. The other probe, [Gd-DOTAM](3+), caused PREs on a well-defined patch near the metal center of rubredoxin (especially the patch constituted by residues D19-G23 and W37-S45, which broaden beyond detection). This effect was partially reversed for some resonances (C6-Y11, in particular) when cytochrome c(3) was added to this system. Both probes were successful in causing reversible PREs at the partner binding site, thus showing to be good probes to identify partners' binding sites and since the interaction is reversible to structurally characterize protein complexes by better defining the complex interface.

Craciunescu, C. M., R. M. Miranda, R. J. C. Silva, E. Assuncao, and F. M. Braz Fernandes. "Laser beam interaction with Ni-Mn-Ga ferromagnetic shape memory alloys." Optics and Lasers in Engineering. 49.11 (2011): 1289-1293. Abstract
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Timoteo, C. G., AS Pereira, C. E. Martins, S. G. Naik, A. G. Duarte, J. J. Moura, P. Tavares, BH HUYNH, and I. Moura. "Low-spin heme b(3) in the catalytic center of nitric oxide reductase from Pseudomonas nautica." Biochemistry. 50 (2011): 4251-62. AbstractWebsite

Respiratory nitric oxide reductase (NOR) was purified from membrane extract of Pseudomonas (Ps.) nautica cells to homogeneity as judged by polyacrylamide gel electrophoresis. The purified protein is a heterodimer with subunits of molecular masses of 54 and 18 kDa. The gene encoding both subunits was cloned and sequenced. The amino acid sequence shows strong homology with enzymes of the cNOR class. Iron/heme determinations show that one heme c is present in the small subunit (NORC) and that approximately two heme b and one non-heme iron are associated with the large subunit (NORB), in agreement with the available data for enzymes of the cNOR class. Mossbauer characterization of the as-purified, ascorbate-reduced, and dithionite-reduced enzyme confirms the presence of three heme groups (the catalytic heme b(3) and the electron transfer heme b and heme c) and one redox-active non-heme Fe (Fe(B)). Consistent with results obtained for other cNORs, heme c and heme b in Ps. nautica cNOR were found to be low-spin while Fe(B) was found to be high-spin. Unexpectedly, as opposed to the presumed high-spin state for heme b(3), the Mossbauer data demonstrate unambiguously that heme b(3) is, in fact, low-spin in both ferric and ferrous states, suggesting that heme b(3) is six-coordinated regardless of its oxidation state. EPR spectroscopic measurements of the as-purified enzyme show resonances at the g approximately 6 and g approximately 2-3 regions very similar to those reported previously for other cNORs. The signals at g = 3.60, 2.99, 2.26, and 1.43 are attributed to the two charge-transfer low-spin ferric heme c and heme b. Previously, resonances at the g approximately 6 region were assigned to a small quantity of uncoupled high-spin Fe(III) heme b(3). This assignment is now questionable because heme b(3) is low-spin. On the basis of our spectroscopic data, we argue that the g = 6.34 signal is likely arising from a spin-spin coupled binuclear center comprising the low-spin Fe(III) heme b(3) and the high-spin Fe(B)(III). Activity assays performed under various reducing conditions indicate that heme b(3) has to be reduced for the enzyme to be active. But, from an energetic point of view, the formation of a ferrous heme-NO as an initial reaction intermediate for NO reduction is disfavored because heme [FeNO](7) is a stable product. We suspect that the presence of a sixth ligand in the Fe(II)-heme b(3) may weaken its affinity for NO and thus promotes, in the first catalytic step, binding of NO at the Fe(B)(II) site. The function of heme b(3) would then be to orient the Fe(B)-bound NO molecules for the formation of the N-N bond and to provide reducing equivalents for NO reduction.

Carvalho, Helena, Susana Duarte, and Cruz V. Machado. "Lean, agile, resilient and green: divergencies and synergies." International Journal of Lean Six Sigma. 2 (2011): 151-179. AbstractWebsite

Purpose – This paper aims to explore the divergences and commitments between the lean, agile, resilient and green paradigms while investigating the effect of paradigms' practices within supply chain attributes.
Design/methodology/approach – A conceptual model with lean, agile, resilient and green practices and supply chain management attributes is proposed. Causal diagrams were used to represent the relationships between paradigm practices and supply chain attributes. The four diagrams were aggregated to build the conceptual model.
Findings – The conceptual model allows for the identification of synergies and divergences resulting from the paradigms practices implementation. The synergies between paradigms are related to “information frequency” and “integration level” increasing as well as reduction of “production lead time” and “transportation lead time”. However, other supply chain attributes such as “capacity surplus”, “inventory level” and “replenishment frequency” are affected in opposite directions by some paradigms creating divergences.
Research limitations/implications – The model relationships were established using an anecdotal approach derived from the literature review, reflecting only a partial view of supply chain dynamics. More research related to other supply chain attributes and/or paradigm practices, and validation of the proposed relationships is suggested.
Practical implications – The proposed model can be the basis for further research in lean, agile, resilient and green paradigms, contributing to a more sustainable and competitive lean supply chain with the necessary agility toward a quick response, resiliency to disruptions, and harmonization with the ecologic and environmental aspects. Originality/value – To the authors' knowledge this paper is the first to provide an understanding about the tradeoffs among lean, agile, resilient and green supply chain paradigms.

Nolan, M. G., J. A. Hamilton, S. O’Brien, G. Bruno, L. Pereira, E. Fortunato, R. Martins, I. M. Povey, and M. E. Pemble. "{The characterisation of aerosol assisted CVD conducting, photocatalytic indium doped zinc oxide films}." Journal of Photochemistry and Photobiology A: Chemistry. 219 (2011): 10-15. AbstractWebsite
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Pina, J. M., D. Inacio, G. Luis, J. M. Ceballos, P. Pereira, J. Martins, M. Ventim-Neves, A. Alvarez, and A. L. Rodrigues. "Research and Development of Alternative Concepts in HTS Machines." Applied Superconductivity, IEEE Transactions on. 21 (2011): 1141-1145. Abstract

High temperature superconducting (HTS) machines are recognized to offer several advantageous features when comparing to conventional ones. Amongst these, highlights the decrease in weight and volume of the machines, due to increased current density in conductors or the absence of iron slots' teeth; or the decrease in AC losses and consequent higher efficiency of the machines, even accounting for cryogenics. These concepts have been already demonstrated and some machines have even achieved commercial stage. In this paper, several alternative approaches are applied to electrical motors employing HTS materials. The first one is an all superconducting linear motor, where copper conductors and permanent magnets are replaced by Bi-2223 windings and trapped flux magnets, taking advantage of stable levitation due to flux pinning, higher current densities and higher excitation field. The second is an induction disk motor with Bi-2223 armature, where iron, ironless and hybrid approaches are compared. Finally, an innovative command strategy, consisting of an electronically variable pole pairs' number approach, is applied to a superconducting hysteresis disk motor. All these concepts are being investigated and simulation and experimental results are presented.