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2017
Marzola, Marco, Octávio Mateus, Jesper Milàn, and Lars Bjørn Clemmensen European affinities of the Late Triassic biota from Greenland are related to paleolatitude. Vol. 91. 15th Annual Meeting of the European Association of Vertebrate Palaeontologists, 91. Zitteliana, 2017. Abstract09._eavp_2017_-_marzola_et_al._2017._european_affinities_of_the_late_triassic_biota_from_greenland_are_related_to_paleolatitude.pdf

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Figueiredo, E., A. Lackinger, B. C. Rey, R. J. C. Silva, JP Veiga, and J. Mirão. "An Experimental Approach for Smelting Tin Ores From Northwestern Iberia." Materials and Manufacturing Processes. 32 (2017): 765-774.
Versteeg, T., M. Baumann, Marcel Weil, and António Moniz. "Exploring emerging battery technology for grid-connected energy storage with Constructive Technology Assessment." Technological Forecasting and Social Change. 115 (2017): 99-110. AbstractWebsite

The last decades have shown an increasing amount of research into expectations of science and technology. Especially for emerging technologies, expectations held by different stakeholder are guiding the direction of research and development. In this article the results of an investigation into the expectations of specific actors regarding the development of emerging battery technology for applications in the power grid are presented. It is set up as an explorative study within the framework of Constructive Technology Assessment (CTA). A number of studies since the 1990s have indicated a growing need for energy storage options in the power grid, where batteries appear to be capable of providing a range of valuable services to the grid. Cost-effectiveness on a large scale will however require considerable technical improvements. The configuration of energy storage may differ in the specific location and exploitation of the storage assets, as well as in the investments in new storage capacity. In this study the visions and expectations of several relevant actors are analysed using interviews and surveys in terms of expectations of technological development, expectations concerning stakeholder roles, and channels of interaction between the relevant actors. The results indicate a divide in expectations between the user side of the technology (the electric power industry) and the development side (academic researchers). Opinions differ with respect to the obstacles to technological development, the actors relevant in early technological development, and the most suitable channels for interaction between these actors. It follows from the theoretical background that conflicts in expectations provide the opportunity for the acceleration of technological development and adoption through stakeholder participation. Small interactive workshops, where conflicts identified in this paper are discussed, were identified as a suitable channel in order to reach consensus in visions and expectations for battery technology.

Araújo, João, Michael Kinyon, Janusz Konieczny, and António Malheiro. "Four notions of conjugacy for abstract semigroups." Proceedings of the Royal Society of Edinburgh: Section A Mathematics. 147 (2017): 1169-1214. AbstractWebsite

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Pereira, B., O. Mateus, J. C. Kullberg, and R. Rocha The geotouristic potential of the Oeste Region of Portugal. 14th European Geoparks Conference | Abstracts Book 167. Ponta Delgada, 2017.pereira_et_al_2017_geotouristic_oeste.pdf
Fischer, Martin, Bettina Krings, António Moniz, and Eike Zimpelmann. "Herausforderungen der Mensch-Roboter-Kollaboration." Lernen & Lehren. 32.125 (2017): 8-14. AbstractWebsite

Die Ausweitung von Robotertechnologien nicht nur in der Industrie, sondern zunehmend auch in Dienstleistungsbereiche, stellt große Herausforderungen an die Mensch-Roboter-Kollaboration. Der Artikel beleuchtet psychologische, soziologische, arbeitswissenschaftliche und berufspädagogische Gesichtspunkte bei der Gestaltung und dem Einsatz von Robotern in Produktion und Service. Zu diesem Zweck werden zunächst spezifische Merkmale der Mensch-Roboter-Interaktion dargestellt, um anschließend Prinzipien der Funktionsteilung zwischen Menschen und Robotern in Arbeitssystemen des Produktions- und Servicebereichs zu diskutieren. Zu berücksichtigen sind hier die Organisation gesellschaftlicher Arbeit, die spezifischen Arbeitsaufgaben sowie die Möglichkeiten und Grenzen der informationstechnischen Realisierung solcher Aufgaben. Der Artikel endet mit dem Plädoyer, bei der Entwicklung und Anwendung von Robotern arbeitswissenschaftliche Kriterien mit Ansätzen partizipativer Technikgestaltung zu kombinieren.

Ferrás, L., N. Ford, M. L. Morgado, M. Rebelo, and G. H. Mckinley. "HOW NON-INTEGER ORDER DERIVATIVES CAN BE USEFUL TO RHEOLOGY." SYMCOMP 2017. 2017.
Krings, Bettina-Johanna, António Brandão Moniz, and Linda Nierling Informatisiert, vernetzt & effizient? Digitale Arbeitswelten und ihre Folgen. "Neue Arbeitswelt und Digitalisierung", 17. Österreichische Konferenz für Technikfolgenabschätzung. Vienna: Institut für Technikfolgen-Abschätzung der Österreichischen Akademie der Wissenschaften, 2017.
Paiva, Luís, Pedro Pereira, Bruno Almeida, Pedro Maló, Juha Hyvärinen, Krzysztof Klobut, Vanda Dimitriou, and Tarek Hassan Interoperability: A Data Conversion Framework to Support Energy Simulation. Vol. 1. Sustainable Places 2017, 1., 2017. Abstract

In this paper an interoperability solution is proposed, aiming to go from (building) construction models to energy simulation. Moreover, the energy simulation results will feed the KPI’s analysis of a designed building. The proposed solution will be used to translate different data formats allowing the communication between different systems in an automated environment. The solution presented in this paper exploits the concept of Plug’n’Interoperate (PnI), that is supported by the principle of self-configuration as to automate, as much as possible, the configuration and participation of systems into a shared interoperability environment. In order to validate this approach two different scenarios were taken into account, translating from a CAD (Computer- Aided Design) model data format to an energy simulation data format.

Maia, L. B., and JJG Moura. "Lessons from denitrification for the human metabolism of signalling nitric oxide." Metalloenzymes in Denitrification: Applications and Environmental Impacts, RSC Metallobiology Series No. 9 (ISBN: 978-1-78262-376-2). Eds. I. Moura, JJG Moura, S. R. Pauleta, and L. B. Maia. Vol. 41. The Royal Society of Chemistry, 2017. 300-320. Abstract

The nitric oxide radical ˙NO (NO) is a signalling molecule involved in several physiological processes in humans, including vasodilation, immune response, neurotransmission, platelet aggregation, apoptosis and gene expression. Undue normal conditions, NO synthases catalyse the formation of NO from l-arginine and dioxygen. Yet, upon a hypoxic event, when the decreased dioxygen concentration compromises NO synthase activity, cells can generate NO from another source: nitrite. Since the late 1990s, it has become clear that nitrite can be reduced back to NO under hypoxic/anoxic conditions. Simultaneously, it was realised that nitrite can exert a significant cytoprotective action in vivo during ischaemia and other pathological conditions. Presently, blood and tissue nitrite are recognised as NO “storage forms” that can be made available in order to maintain NO formation and ensure cell signalling and survival under challenging conditions. To reduce nitrite to NO, human cells can use different metalloproteins that are present in cells for carrying out other functions, including several haemic proteins and molybdoenzymes, forming what we refer to as “non-dedicated nitrite reductases”. In this chapter, two non-dedicated nitrite reductases—xanthine oxidase and myoglobin—will be described, and the human nitrate/nitrite/NO signalling pathway will be discussed within the cellular context and the nitrogen cycle scenario.

http://docentes.fct.unl.pt/lblm/files/rsc_book-denitrification-2017-chap_17.pdf

Deters, J.K., Zalakeviciute, R., Gonzalez, M., and Rybarczyk Y. "Modeling PM2.5 urban pollution using machine learning and selected meteorological parameters." Journal of Electrical and Computer Engineering. 2017 (2017): 1-14.copy.pdf
Maia, L. B., I. Moura, and JJG Moura. "Molybdenum and tungsten-containing enzymes: an overview." Molybdenum and Tungsten Enzymes: Biochemistry, RSC Metallobiology Series No. 5 (ISBN: 978-1-78262-089-1). Eds. R. Hille, C. Schulzke, and M. Kirk. Vol. 28. The Royal Society of Chemistry, 2017. 1-80. Abstract

Molybdenum is essential to most organisms, being found in the active site of enzymes that catalyze redox reactions involving carbon, nitrogen and sulfur atoms of key metabolites. Some of the molybdenum-dependent reactions constitute key steps in the global biogeochemical cycles of carbon, nitrogen and sulfur, with particular emphasis on the atmospheric dinitrogen fixation into ammonium. Presently, more than 50 molybdoenzymes are known. The great majority are prokaryotic, with eukaryotes holding only a restricted number of molybdoenzymes. Tungsten, probably because of its limited bioavailability, is less used, being found most often in anaerobic thermophilic prokaryotes.

This chapter provides an overview on the molybdo- and tungstoenzymes.
Their physiological context and significance will be described in Section 1.2,where the recent hypothesis that the lack of molybdenum could have been the limiting factor for the life evolution and expansion on early Earth will receive special attention (Section 1.2.1). A brief introduction to the chemical properties that shape the catalytically competent molybdenum/tungsten centres will be made in Section 1.3. In Section 1.4, the enzymes will be grouped in five main families (Sections 1.4.1 to 1.4.5), according to their metal/cofactor structure, and a general view on the structural (section (a)) and mechanistic (section (b)) versatility of each family will be presented. A brief account of novel heteronuclear centres containing molybdenum, whose physiological function is not yet fully understood, will be made in Section 1.4.6. A final outlook on our present knowledge about these enzymes will conclude this chapter.

http://docentes.fct.unl.pt/lblm/files/mo_w_enzymes-rsc_book-chap_1.pdf

Correia, Isabel, and Teresa Melo. "A multi-period facility location problem with modular capacity adjustments and flexible demand fulfillment." Computers & Industrial Engineering.. 100 (2017): 307-321.
Myers, Timothy S., Michael J. Polcyn, Octávio Mateus, Diana P. Vineyard, António Olímpio Gonçalves, and Louis L. Jacobs. "A new durophagous stem cheloniid turtle from the lower Paleocene of Cabinda, Angola." Papers in Palaeontology. 2017 (2017): 1-16. Abstractnew_durophagous_stem_cheloniid_turtle_from_the_lower_paleocene_of_cabinda_angola.pdfWebsite

A new stem cheloniid turtle, Cabindachelys landanensis, gen. et sp. nov., is represented by a nearly complete skull and partial hyoid collected in lower Paleocene shallow marine deposits, equivalent to the offshore Landana Formation, near the town of Landana in Cabinda, Angola. A partial chelonioid carapace previously reported from this locality is referred here to C. landanensis. Cabindachelys landanensis possesses clear synapomorphies of Pan-Cheloniidae, including a rod-like rostrum basisphenoidale, V-shaped basisphenoid crest, and secondary palate, but also retains a reduced foramen palatinum posterius, unlike most other pan-cheloniids. Phylogenetic analysis suggests that C. landanensis forms a weakly-supported clade with Erquelinnesia gosseleti, Euclastes acutirostris, Euclastes wielandi and Terlinguachelys fischbecki, although a close relationship between the protostegid T. fischbecki and these durophagous pan-cheloniids is unlikely. The Paleocene–Eocene strata near Landana have produced a number of turtle fossils, including the holotype specimen of the pleurodire Taphrosphys congolensis. A turtle humerus collected c. 1 m above the holotype skull of C. landanensis differs from humeri of chelonioids and Taphrosphys, indicating that a third turtle taxon is present at Landana. Cheloniid fossil material is rare in the Landana assemblage, in comparison with the abundant remains of Taphrosphys congolensis found throughout the stratigraphic section. This disparity implies that C. landanensis preferred open marine habitats, whereas Taphrosphys congolensis spent more time in nearshore environments. The appearance of new durophagous species such as C. landanensis in the early Paleocene reflects the rapid radiation of pan-cheloniids as they diversified into open niches following the K–Pg extinction.

Cain, A. J., G. Klein, Ł. Kubat, A. Malheiro, and J. Okniński A note on identities in plactic monoids and monoids of upper-triangular tropical matrices. ArXiv e-prints., 2017. Abstract

This paper uses the combinatorics of Young tableaux to prove the plactic monoid of infinite rank does not satisfy a non-trivial identity, by showing that the plactic monoid of rank n cannot satisfy a non-trivial identity of length less than or equal to n. A new identity is then proven to hold for the monoid of n×n upper-triangular tropical matrices. Finally, a straightforward embedding is exhibited of the plactic monoid of rank 3 into the direct product of two copies of the monoid of 3×3 upper-triangular tropical matrices, giving a new proof that the plactic monoid of rank 3 satisfies a non-trivial identity.

Mateus, O., PM Callapez, and E. Puértolas-Pascual The oldest Crocodylia? a new eusuchian from the Late Cretaceous (Cenomanian) of Portugal. Vol. 2017. Journal of Vertebrate Paleontology, Program and Abstracts, 2017., 2017. Abstractmateus_et_al_2017_oldest_crocodylia_svp_2017_abstract.pdf

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Correia, T., L. Barcelos, T. Nunes, D. Riff, and O. Mateus On a titanosaur scapula from the Marília Formation (Upper Cretaceous, Bauru Group) in Campina Verde Town. XXV Congresso Brasileiro de Paleontologia Boletim de Resumos., 2017. Abstractthiago_abstract_brazil_2017.pdf

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Cain, A. J., R. D. Gray, and A. Malheiro. "On finite complete rewriting systems, finite derivation type, and automaticity for homogeneous monoids." Information and Computation. 255 (2017): 68-93. AbstractWebsite

The class of finitely presented monoids defined by homogeneous (length-preserving) relations
is considered. The properties of admitting a finite complete rewriting system, having finite derivation type, being automatic, and being biautomatic, are investigated for monoids in this class. The first main result shows that for any possible combination of these properties and their negations there is a homoegenous monoid with exactly this combination of properties. We then extend this result to show that the same statement holds even if one restricts attention to the class of $n$-ary multihomogeneous monoids (meaning every side of every relation has fixed length $n$, and all relations are also content preserving).

Tschopp, Emanuel, and Octávio Mateus. "Osteology of Galeamopus pabsti sp. nov. (Sauropoda: Diplodocidae), with implications for neurocentral closure timing, and the cervico-dorsal transition in diplodocids." PeerJ. 5 (2017): e3179. Abstracttschopp__mateus_2017_osteology_of_galeamopus_pabsti_sp.__nov._sauropoda__diplodocidae_.pdfWebsite

Diplodocids are among the best known sauropod dinosaurs. Numerous specimens of currently 15 accepted species belonging to ten genera have been reported from the Late Jurassic to Early Cretaceous of North and South America, Europe, and Africa. The highest diversity is known from the Upper Jurassic Morrison Formation of the western United States: a recent review recognized 12 valid, named species, and possibly three additional, yet unnamed ones. One of these is herein described in detail and referred to the genus \textit{Galeamopus}. The holotype specimen of \textit{Galeamopus pabsti} sp. nov., SMA 0011, is represented by material from all body parts but the tail, and was found at the Howe-Scott Quarry in the northern Bighorn Basin in Wyoming, USA. Autapomorphic features of the new species include a horizontal canal on the maxilla that connects the posterior margin of the preantorbital and the ventral margin of the antorbital fenestrae, a vertical midline groove marking the sagittal nuchal crest, the presence of a large foramen connecting the postzygapophyseal centrodiapophyseal fossa and the spinopostzygapophyseal fossa of mid- and posterior cervical vertebrae, a very robust humerus, a laterally placed, rugose tubercle on the concave proximal portion of the anterior surface of the humerus, a relatively stout radius, the absence of a distinct ambiens process on the pubis, and a distinctly concave posteroventral margin of the ascending process of the astragalus. In addition to the holotype specimen SMA 0011, the skull USNM 2673 can also be referred to \textit{Galeamopus pabsti}. Histology shows that the type specimen SMA 0011 is sexually mature, although neurocentral closure was not completed at the time of death. Because SMA 0011 has highly pneumatized cervical vertebrae, the development of the lamination appears a more important indicator for individual age than neurocentral fusion patterns. SMA 0011 is one of very few sauropod specimens that preserves the cervico-dorsal transition in both vertebrae and ribs. The association of ribs with their respective vertebrae shows that the transition between cervical and dorsal vertebrae is significantly different in \textit{Galeamopus pabsti} than in \textit{Diplodocus carnegii} or \textit{Apatosaurus louisae}, being represented by a considerable shortening of the centra from the last cervical to the first dorsal vertebra. Diplodocids show a surprisingly high diversity in the Morrison Formation. This can possibly be explained by a combination of geographical and temporal segregation, and niche partitioning.

Tschopp, Emanuel, Friedrich A. Tschopp, and Octávio Mateus. "Overlap Indices: Tools to quantify the amount of anatomical overlap among groups of incomplete terminal taxa in phylogenetic analyses." Acta Zoologica. 99.2 (2017): 169-176. Abstracttschopp_et_al-2017-acta_zoologica_overlap_indices_tools_to_quantify_the_amount.pdfWebsite

Phylogenetic analyses of morphological data are often characterized by missing data due to incomplete operational taxonomic units, as in fossils. This incomplete knowledge derives from various reasons, including—in the case of fossils—the numerous filters an organism has to pass through during taphonomy, fossilization, weathering and collecting. Whereas several methods have been proposed to address issues raised by the inclusion of incomplete terminal taxa, until recently no tool existed to easily quantify the amount of anatomical overlap within a particular clade. The Overlap Indices provide such values and might prove useful for comparative cladistics. We herein describe these new indices and their applications in detail and provide an example file for their calculation. A case study of diplodocid sauropod dinosaurs shows how the Overlap Indices will help to explore and quantify, which one of a number of conflicting tree topologies is supported by more anatomical traits, which skeletal regions are underrepresented in a particular phylogenetic matrix, and which taxon would improve character state score completeness.