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2011
Ramos, Tania Rodrigues Pereira, Maria Isabel Gomes, and Ana Paula Barbosa-póvoa Solving a multi-product, multi-depot vehicle routing problem by a hybrid method. Livro de actas do 15º congresso da APDIO, IO2011. Coimbra, Portugal, 2011. Abstract2011_ramosgomesbarbosapovoa_io2011.pdf

This paper is focused on the delimitation of service areas and on vehicle routes definition in recyclable waste collection systems with more than one depot. Three types of materials have to be collected in separated routes, so the problem is modelled as a multi-product, multi-depot vehicle routing problem. A hybrid method is developed where a MIP solver is embedded inside a heuristic framework. The effectiveness of this method is tested by comparing the results obtained for some test instances when solved only by an exact formulation. The hybrid method is then applied to a medium size problem based on a real recyclable waste collection system.

Martins, D., L. Ribeiro, D. Lopes, I. Catarino, IAAC Esteves, J. P. B. Mota, and G. Bonfait. "Sorption characterization and actuation of a gas-gap heat switch." Sensors and Actuators A: Physical. 171 (2011): 324-331. Abstract

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Hollander, Yoav, Alan Hu, João M. Lourenço, and Ronny Morad. "Special Session on Debugging." Hardware and Software: Verification and Testing. Eds. Sharon Barner, Ian Harris, Daniel Kroening, and Orna Raz. Vol. 6504. Lecture Notes in Computer Science, 6504. Springer Berlin / Heidelberg, 2011. 24-28. Abstracthvc2010-secial_session_on_debugging.pdf

In software, hardware, and embedded system domains, debugging is the process of locating and correcting faults in a system. Depending on the context, the various characteristics of debugging induce different challenges and solutions. Post-silicon hardware debugging, for example, needs to address issues such as limited visibility and controllability, while debugging software entails other issues, such as the handling of distributed or non-deterministic computation. The challenges that accompany such issues are the focus of many current research efforts. Solutions for debugging range from interactive tools to highly analytic techniques. We have seen great advances in debugging technologies in recent years, but bugs continue to occur, and debugging still encompasses significant portions of the life-cycles of many systems. The session covered state-of-the-art approaches as well as promising new research directions in both the hardware and software domains.

Faria, Duarte M. V., Valter J. G. Lucio, and Pinho A. Ramos. "Strengthening of flat slabs with post-tensioning using anchorages by bonding." Engineering Structures. 33 (2011): 2025-2043. AbstractWebsite

This work aims to study a new flat slab strengthening technique based on post-tensioning with anchorages by bonding using an epoxy adhesive. The main advantages of this technique over the traditional prestress strengthening systems that use mechanical anchorages are that it does not need external permanent anchorages, meaning that the forces are introduced into the concrete gradually instead of being localized, thereby preserving aesthetics and useable space. The seven tested slab models show that this technique meets its objective as it is able to reduce reinforcement strains at service loads by up to 80{%} if the strengthening technique is applied in two directions and slab deformations by up to 70{%}, consequently making crack widths smaller. It can also increase punching load capacity by as much as 51{%} when compared to non-strengthened slabs. The results are compared with the EC2 (2004) [20], ACI 318-08 (2008) [23] and MC2010 (2010) [21] provisions. The main conclusions are that this strengthening technique is effective regarding ultimate and serviceability states and that it represents an advance in RC slab strengthening techniques. ?? 2011 Elsevier Ltd.

Rybarczyk, Y., and Fonseca J. "Tangible interface for a rehabilitation of comprehension in aphasic patients." 11th conference of the Association for the Advancement of Assistive Technology in Europe. Maastricht, Netherlands 2011. copy.pdf
Rocha, H. Teachers’ use of graphing calculators in high school mathematics classroom. Proceedings of CERME 7 – Seventh Congress of European Research in Mathematics Education. Rzezów, Poland: ERME, 2011.
Lourenço, João M. "Understanding Transactional Memory (Extended Abstract)." Hardware and Software: Verification and Testing. Eds. Sharon Barner, Ian Harris, Daniel Kroening, and Orna Raz. Vol. 6504. Lecture Notes in Computer Science, 6504. Springer Berlin / Heidelberg, 2011. 1-2. Abstracthvc2010-understanding_transactional_memory.pdf

Transactional Memory [3] (TM) is a new paradigm for concurrency control that brings the concept of transactions, widely known from the Databases community, into the management of data located in main memory. TM delivers a powerful semantics for constraining concurrency and provides the means for the extensive use of the available parallel hardware. TM uses abstractions that promise to ease the development of scalable parallel applications by achieving performances close to fine-grained locking while maintaining the simplicity of coarse-grained locking.

Amado, M. P., and M. R. Ribeiro Urban Sprawl promoted through Master Planning. World Congress of Sustainable Building. Helsinki, Finland: SB11, 2011.
R. Ramos, J. Castro, J. Araújo, and F. Alencar. "A Use Case Package Refactoring: Dealing with the Large, Scattering or Tangling Use Case Model Problems." VIII Latin American Conference on Pattern Languages of Programming - SugarLoafPlop. Springer-Verlag, 2011. Abstract

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Alves, M., S. Moes, P. Jenoe, C. Pinheiro, J. Passarinho, and C. P. Ricardo. "The analysis of Lupinus albus root proteome revealed cytoskeleton altered features due to long-term boron deficiency." Journal of Proteomics. 74 (2011): 1351-1363. AbstractWebsite
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Alves, M., S. Moes, P. Jenoe, C. Pinheiro, J. Passarinho, and C. P. Ricardo. "The analysis of Lupinus albus root proteome revealed cytoskeleton altered features due to long-term boron deficiency." Journal of Proteomics. 74 (2011): 1351-1363. AbstractWebsite
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Martins, R., B. Bras, I. Ferreira, L. Pereira, P. Barquinha, N. Correia, R. Costa, T. Busani, A. Goncalves, A. Pimentel, and E. Fortunato. "Away from silicon era: the paper electronics." Oxide-Based Materials and Devices Ii. Eds. F. H. Teherani, D. C. Look, and D. J. Rogers. Vol. 7940. Proceedings of SPIE, 7940. 2011. Abstract
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Santos-Silva, T., A. Mukhopadhyay, J. D. Seixas, G. J. L. Bernardes, C. C. Romão, and MJ Romão. "CORM-3 reactivity toward proteins: The crystal structure of a Ru(II) dicarbonyl-lysozyme complex." Journal of the American Chemical Society. 133 (2011): 1192-1195. Abstract
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Dias, MI, Ondina M. Figueiredo, Antónia M. Matos, A. Pais, Maria Isabel Prudêncio, Teresa Pereira Silva, Christopher Ian Burbidge, A. L. Rodrigues, and João Pedro Veiga. "Datação, autenticidade, materiais e pigmentos. Estudos laboratoriais sobre faiança portuguesa e porcelana chinesa produzida para o mercado português, séculos XVI a XVIII." IX Congresso Ibérico de Arqueometria (CIA). 2011. Abstract
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R., Neagu E., C. Dias, Lança M. Carmo, Igreja R., Inacio P., and Marat-Mendes J. N. "Discrimination between Space Charge and Dipolar Contributions in Ferroelectric Polymers." 14th International Symposium on Electrets. International Symposium on Electrets. 2011. Abstract

The final thermally stimulated discharge current method allows a better selection of the experimental conditions for sample polarization. By decreasing the ratio between the charging time and the discharging time, the apparent peak is of the same order of magnitude as the genuine peaks and there is only a partial overlap between then. Two peaks have been identified for polyamide 11, one associated with the glass transition around 60 °C and the second associated with the Curie transition around 96 °C.

Diniz, M. S., R. Pereira, A. C. Freitas, T. A. P. Rocha-Santos, L. Castro, I. Peres, and A. C. Duarte. "Evaluation of the sub-lethal toxicity of bleached kraft pulp mill effluent to carassius auratus and dicentrarchus labrax." Water, Air, and Soil Pollution. 217 (2011): 35-45. AbstractWebsite
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Pereira, Ricardo, J. Coutinho, A. Carvalho, L. Pereira, L. Rino, VJB Torres, Lu{\'ıs de Almeida, Sergej Filonovich, T. Busani, H. Águas, and others. "Hybridsolar project: hybrid Si-Nanoparticle/polymer layers for solar cell applications." III Annual Meeting of the I3N–Institute of Nanostructures, Nanomodelling and Nanofabrication, 2011. 2011. 10. Abstract
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Pinheiro, Carla, Carla Antonio, Maria Fernanda Ortuno, Petre I. Dobrev, Wolfram Hartung, Jane Thomas-Oates, Candido Pinto Ricardo, Radomira Vankova, Manuela M. Chaves, and Julie C. Wilson. "Initial water deficit effects on Lupinus albus photosynthetic performance, carbon metabolism, and hormonal balance: metabolic reorganization prior to early stress responses." Journal of Experimental Botany. 62 (2011): 4965-4974. AbstractWebsite

The early (2-4 d) effects of slowly imposed soil water deficit on Lupinus albus photosynthetic performance, carbon metabolism, and hormonal balance in different organs (leaf blade, stem stele, stem cortex, and root) were evaluated on 23-d-old plants (growth chamber assay). Our work shows that several metabolic adjustments occurred prior to alteration of the plant water status, implying that water deficit is perceived before the change in plant water status. The slow, progressive decline in soil water content started to be visible 3 d after withholding water (3 DAW). The earliest plant changes were associated with organ-specific metabolic responses (particularly in the leaves) and with leaf conductance and only later with plant water status and photosynthetic rate (4 DAW) or photosynthetic capacity (according to the Farquhar model; 6 DAW). Principal component analysis (PCA) of the physiological parameters, the carbohydrate and the hormone levels and their relative values, as well as leaf water-soluble metabolites full scan data (LC-MS/MS), showed separation of the different sampling dates. At 6 DAW classically described stress responses are observed, with plant water status, ABA level, and root hormonal balance contributing to the separation of these samples. Discrimination of earlier stress stages (3 and 4 DAW) is only achieved when the relative levels of indole-3-acetic acid (IAA), cytokinins (Cks), and carbon metabolism (glucose, sucrose, raffinose, and starch levels) are taken into account. Our working hypothesis is that, in addition to single responses (e.g. ABA increase), the combined alterations in hormone and carbohydrate levels play an important role in the stress response mechanism. Response to more advanced stress appears to be associated with a combination of cumulative changes, occurring in several plant organs. The carbohydrate and hormonal balance in the leaf (IAA to bioactive-Cks; soluble sugars to IAA and starch to IAA; relative abundances of the different soluble sugars) flag the initial responses to the slight decrease in soil water availability (10-15% decrease). Further alterations in sucrose to ABA and in raffinose to ABA relative values (in all organs) indicate that soil water availability continues to decrease. Such alterations when associated with changes in the root hormone balance indicate that the stress response is initiated. It is concluded that metabolic balance (e.g. IAA/bioactive Cks, carbohydrates/IAA, sucrose/ABA, raffinose/ABA, ABA/IAA) is relevant in triggering adjustment mechanisms.

Pinheiro, Carla, Carla Antonio, Maria Fernanda Ortuno, Petre I. Dobrev, Wolfram Hartung, Jane Thomas-Oates, Candido Pinto Ricardo, Radomira Vankova, Manuela M. Chaves, and Julie C. Wilson. "Initial water deficit effects on Lupinus albus photosynthetic performance, carbon metabolism, and hormonal balance: metabolic reorganization prior to early stress responses." Journal of Experimental Botany. 62 (2011): 4965-4974. AbstractWebsite
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Guimarães, D., M. L. Carvalho, M. Becker, A. von Bohlen, V. Geraldes, I. Rocha, and J. P. Santos. "Lead concentration in feces and urine of exposed rats by X-ray Fluorescence and Electrothermal Atomic Absorption Spectrometry." X-Ray Spectrometry. In press (2011). Abstract
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Alves, M., P. Chicau, H. Matias, J. Passarinho, C. Pinheiro, and C. P. Ricardo. "Metabolic analysis revealed altered amino acid profiles in Lupinus albus organs as a result of boron deficiency." Physiologia Plantarum. 142 (2011): 224-232. AbstractWebsite

We analysed the changes in the metabolites of Lupinus albus organs (leaf-blades, petioles, apexes, hypocotyls and roots) as a consequence of B deficiency. The deficiency did not affect malate concentration and induced only minor changes in the sugar content, suggesting that the carbohydrate metabolism is little affected by the deficiency. Contrarily, marked changes in the content of free amino acids were observed, with some specific variations associated with the different organs. These changes indicate that various aspects of metabolism implicated in the amino acid accumulation were affected by B deficiency. Most of the detected changes appear to have implications with some stress responses or signalling processes. Asparagine and proline that increase in many stresses also accumulated in petioles, apexes and hypocotyls. Accumulation of gamma-aminobutyric acid shunt amino acids, indicative of production of reactive oxygen species, occurs in the same three organs and also the roots. The increase in the branched-chain amino acids, observed in all organs, suggests the involvement of B with the cytoskeleton, whereas glycine decrease in leaf-blades and active growing organs (apexes and roots) could be associated with the proposed role of this amino acids in plant signalling in processes that might be associated with the decreased growth rates observed in B deficiency. Despite the admitted importance of free amino acids in plant metabolism, the available information on this matter is scarce. So our results bring new information concerning the effects of B deficiency in the metabolism of the several L. albus organs.

Alves, M., P. Chicau, H. Matias, J. Passarinho, C. Pinheiro, and C. P. Ricardo. "Metabolic analysis revealed altered amino acid profiles in Lupinus albus organs as a result of boron deficiency." Physiologia Plantarum. 142 (2011): 224-232. AbstractWebsite
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Garcia-Alvarez, Begona, Roberto Melero, Fernando M. V. Dias, Jose A. M. Prates, Carlos M. G. A. Fontes, Steven P. Smith, Maria Joao Romao, Ana Luisa Carvalho, and Oscar Llorca. "Molecular Architecture and Structural Transitions of a Clostridium thermocellum Mini-Cellulosome." Journal of Molecular Biology. 407 (2011): 571-580. Abstract
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Mateus, O., J. Milàn, M. Romano, and M. A. Whyte. "New finds of stegosaur tracks from the Upper Jurassic Lourinhã formation, Portugal." Acta Palaeontologica Polonica. 56 (2011): 651-658. Abstract
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Filanovsky, I. M., M. Reja, and L. B. Oliveira. "New non-gyrator type active inductors with applications." Circuits and Systems (MWSCAS), 2011 IEEE 54th International Midwest Symposium on. IEEE, 2011. 1-4. Abstract
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