Export 657 results:
Sort by: Author Title Type [ Year  (Desc)]
1999
Nunes, Isabel L., and Rita A. Ribeiro ERGO_X - The evaluation process by means of a fuzzy multiple attribute decision making methodology. Eds. P. Mondelo, M. Mattila, and W. Karwowski. International Conference: Computer-Aided Ergonomics and Safety - CAES'99. Barcelona - Espanha, 1999. Abstract
n/a
Pereira, AS, P. Tavares, C. Krebs, BH HUYNH, F. Rusnak, I. Moura, and JJG Moura. "Biochemical and spectroscopic characterization of overexpressed fuscoredoxin from Escherichia coli." Biochemical and Biophysical Research Communications. 260 (1999): 209-215. AbstractWebsite

Fuscoredoxin is a unique iron containing protein of yet unknown function originally discovered in the sulfate reducers of the genus Desulfovibrio. It contains two iron-sulfur clusters: a cubane [4Fe-4S] and a mixed oxo- and sulfide-bridged 4Fe cluster of unprecedented structure. The recent determination of the genomic sequence of Escherichia coli (E. coli) has revealed a homologue of fuscoredoxin in this facultative microbe. The presence of this gene in E. coli raises interesting questions regarding the function of fuscoredoxin and whether this gene represents a structural homologue of the better-characterized Desulfovibrio proteins. In order to explore the latter, an overexpression system for the E. coli fuscoredoxin gene was devised. The gene was cloned from genomic DNA by use of the polymerase chain reaction into the expression vector pT7-7 and overexpressed in E. coli BL21(DE3) cells. After two chromatographic steps a good yield of recombinant protein was obtained (approximately 4 mg of pure protein per liter of culture). The purified protein exhibits an optical spectrum characteristic of the homologue from D. desulfuricans, indicating that cofactor assembly was accomplished. Iron analysis indicated that the protein contains circa 8 iron atoms/molecule which were shown by EPR and Mossbauer spectroscopies to be present as two multinuclear clusters, albeit with slightly altered spectroscopic features. A comparison of the primary sequences of fuscoredoxins is presented and differences on cluster coordination modes are discussed on the light of the spectroscopic data. (C) 1999 Academic Press.

Wengenack, N., H. Lopes, M. Kennedy, P. Tavares, AS Pereira, I. Moura, JJG Moura, and F. Rusnak. "Redox potential of the heme protein KatG from Mycobacterium tuberculosis." Journal of Inorganic Biochemistry. 74 (1999): 336. AbstractWebsite
n/a
Pereira, AS, P. Tavares, C. Krebs, BH HUYNH, F. Rusnak, I. Moura, and JJG Moura. "{Biochemical and spectroscopic characterization of overexpressed fuscoredoxin from Escherichia coli}." Biochemical And Biophysical Research Communications. 260 (1999): 209-215. Abstract
Fuscoredoxin is a unique iron containing protein of yet unknown function originally discovered in the sulfate reducers of the genus Desulfovibrio. It contains two iron-sulfur clusters: a cubane [4Fe-4S] and a mixed oxo- and sulfide-bridged 4Fe cluster of unprecedented structure. The recent determination of the genomic sequence of Escherichia coli (E. coli) has revealed a homologue of fuscoredoxin in this facultative microbe. The presence of this gene in E. coli raises interesting questions regarding the function of fuscoredoxin and whether this gene represents a structural homologue of the better-characterized Desulfovibrio proteins. In order to explore the latter, an overexpression system for the E. coli fuscoredoxin gene was devised. The gene was cloned from genomic DNA by use of the polymerase chain reaction into the expression vector pT7-7 and overexpressed in E. coli BL21(DE3) cells. After two chromatographic steps a good yield of recombinant protein was obtained (approximately 4 mg of pure protein per liter of culture). The purified protein exhibits an optical spectrum characteristic of the homologue from D. desulfuricans, indicating that cofactor assembly was accomplished. Iron analysis indicated that the protein contains circa 8 iron atoms/molecule which were shown by EPR and Mossbauer spectroscopies to be present as two multinuclear clusters, albeit with slightly altered spectroscopic features. A comparison of the primary sequences of fuscoredoxins is presented and differences on cluster coordination modes are discussed on the light of the spectroscopic data. (C) 1999 Academic Press.
Wengenack, N., H. Lopes, M. Kennedy, P. Tavares, AS Pereira, I. Moura, JJG Moura, and F. Rusnak. "{Redox potential of the heme protein KatG from Mycobacterium tuberculosis}." Journal Of Inorganic Biochemistry. 74 (1999): 336.
1998
Karlovich, Alexei Yu. "The index of singular integral operators in reflexive Orlicz spaces." Mathematical Notes. 64.3 (1998): 330-341. AbstractWebsite

We consider the Banach algebra \(\mathfrak{A}\) of singular integral operators with matrix piecewise continuous coefficients in the reflexive Orlicz space \(L_M^n(\Gamma)\). We assume that \(\Gamma\) belongs to a certain wide subclass of the class of Carleson curves; this subclass includes curves with cusps, as well as curves of the logarithmic spiral type. We obtain an index formula for an arbitrary operator from the algebra \(\mathfrak{A}\) in terms of the symbol of this operator.

Karlovich, Alexei Yu. "Singular integral operators with piecewise continuous coefficients in reflexive rearrangement-invariant spaces." Integral Equations and Operator Theory. 32 (1998): 436-481. AbstractWebsite

The paper is devoted to some only recently uncovered phenomena emerging in the study of singular integral operators (SIO's) with piecewise continuous (PC) coefficients in reflexive rearrangement-invariant spaces over Carleson curves. We deal with several kinds of indices of submultiplicative functions which describe properties of spaces (Boyd and Zippin indices) and curves (spirality indices). We consider some ``disintegration condition{''} which combines properties of spaces and curves, the Boyd and spirality indices. We show that the essential spectrum of SIO associated with the Riemann boundary value problem with PC coefficient arises from the essential range of the coefficient by filling in certain massive connected sets (so-called logarithmic leaves) between the endpoints of jumps. These results combined with the Allan-Douglas local principle and with the two projections theorem enable us to study the Banach algebra \(\mathfrak{A}\) generated by SIO's with matrix-valued piecewise continuous coefficients. We construct a symbol calculus for this Banach algebra which provides a Fredholm criterion and gives a basis for an index formula for arbitrary SIO's from \(\mathfrak{A}\) in terms of their symbols.

Santos, AGD, W. Klute, J. Torode, V. P. W. Bohm, E. Cabrita, J. Runsink, and RW Hoffmann. "Flexible molecules with defined shape. X. Synthesis and conformational study of 1,5-diaza-cis-decalin." New Journal of Chemistry. 22 (1998): 993-997. Abstract
n/a
Volsky, S., Elena Lomonova, Ben J. Klaassens, and Stanimir Valtchev. "A Basic Computer?Aided Course on Dynamic Processes in Mechatronic Systems for Aeronautical Engineers." 9th Annual Conference of the European Association for Education in Electrical and Information Engineering (EAEEIE). 1998. 293-298.
Nunes, Isabel L., Rita A. Ribeiro, and Virgílio A. Machado ERGO_X - A fuzzy expert system for the design of workstations. Eds. R. Bishu, W. Karwowski, and R. Gonnetilleke. First World Congress on Ergonomics for Global Quality and Productivity (ERGON-AXIA '98). Hong Kong - China, 1998. Abstract
n/a
Abreu, P. M., V. S. Rosa, E. M. Araujo, A. B. Canda, O. Kayser, K. - U. Bindseil, K. Siems, A. Seemann, and A. Seemann. "Phytochemical analysis and antimicrobial evaluation of Detarium microcarpum bark extracts." Pharmaceutical and Pharmacological Letters. 8.3 (1998): 107-109. AbstractWebsite
n/a
Kovács, Ilona, Maria Conceição Cerdeira, Mário Bairrada, and António B. Moniz Qualificações e Mercado de Trabalho. Lisbon: IEFP, 1998.
Valentine, AM, P. Tavares, AS Pereira, R. Davydov, C. Krebs, BM Koffman, DE Edmondson, BH HUYNH, and SJ Lippard. "{Generation of a mixed-valent Fe(III)Fe(IV) form of intermediate Q in the reaction cycle of soluble methane monooxygenase, an analog of intermediate X in ribonucleotide reductase R2 assembly}." Journal Of The American Chemical Society. 120 (1998): 2190-2191.
Pereira, AS, W. Small, C. Krebs, P. Tavares, DE Edmondson, E. C. Theil, and BH HUYNH. "Direct spectroscopic and kinetic evidence for the involvement of a peroxodiferric intermediate during the ferroxidase reaction in fast ferritin mineralization." Biochemistry. 37 (1998): 9871-9876. AbstractWebsite

Rapid freeze-quench (RFQ) Mossbauer and stopped-flow absorption spectroscopy were used to monitor the ferritin ferroxidase reaction using recombinant (apo) frog M ferritin; the initial transient ferric species could be trapped by the RFQ method using low iron loading (36 Fe2+/ferritin molecule). Biphasic kinetics of ferroxidation were observed and measured directly by the Mossbauer method; a majority (85%) of the ferrous ions was oxidized at a fast rate of similar to 80 s(-1) and the remainder at a much slower rate of similar to 1.7 s(-1). In parallel with the fast phase oxidation of the Fe2+ ions, a single transient iron species is formed which exhibits magnetic properties (diamagnetic ground state) and Mossbauer parameters (Delta E-Q = 1.08 +/- 0.03 mm/s and delta = 0.62 +/- 0.02 mm/s) indicative of an antiferromagnetically coupled peroxodiferric complex. The formation and decay rates of this transient diiron species measured by the RFQ Mossbauer method match those of a transient blue species (lambda(max) = 650 nm) determined by the stopped-flow absorbance measurement. Thus, the transient colored species is assigned to the same peroxodiferric intermediate. Similar transient colored species have been detected by other investigators in several other fast ferritins (H and M subunit types), such as the human H ferritin and the Escherichia coli ferritin, suggesting a similar mechanism for the ferritin ferroxidase step in all fast ferritins. Peroxodiferric complexes are also formed as early intermediates in the reaction of O-2 With the catalytic diiron centers in the hydroxylase component of soluble methane monooxygenase (MMOH) and in the D84E mutant of the R2 subunit of E. coli ribonucleotide reductase. The proposal that a single protein site, with a structure homologous to the diiron centers in MMOH and R2, is involved in the ferritin ferroxidation step is confirmed by the observed kinetics, spectroscopic properties, and purity of the initial peroxodiferric species formed in the frog M ferritin.

Valentine, AM, P. Tavares, AS Pereira, R. Davydov, C. Krebs, BM Koffman, DE Edmondson, BH HUYNH, and SJ Lippard. "Generation of a mixed-valent Fe(III)Fe(IV) form of intermediate Q in the reaction cycle of soluble methane monooxygenase, an analog of intermediate X in ribonucleotide reductase R2 assembly." Journal of the American Chemical Society. 120 (1998): 2190-2191. AbstractWebsite
n/a
Goulão, Miguel, António Silva Monteiro, José Furtado Martins, Fernando Brito Abreu, Alberto Bigotte Almeida, and Pedro Sousa. "A Software Evolution Experiment." European Software Control and Metrics Conference (ESCOM'98). Eds. Rob Kusters, Adrian Cowderoy, Fred Heemstra, and Jos Trienekens. Rome, Italy: Shakter Publishing B. V., 1998. Abstract
n/a
Tavares, P., AS Pereira, C. Krebs, N. Ravi, JJG Moura, I. Moura, and BH HUYNH. "Spectroscopic characterization of a novel tetranuclear Fe cluster in an iron-sulfur protein isolated from Desulfovibrio desulfuricans." Biochemistry. 37 (1998): 2830-2842. AbstractWebsite

Mossbauer and EPR spectroscopies were used to characterize the Fe clusters in an Fe-S protein isolated from Desulfovibrio desulfuricans (ATCC 27774). This protein was previously thought to contain hexanuclear Fe clusters, but a recent X-ray crystallographic measurement on a similar protein isolated from Desulfovibrio vulgaris showed that the protein contains two tetranuclear clusters, a cubane-type [4Fe-4S] cluster and a mixed-ligand cluster of novel structure [Lindley et al. (1997) Abstract, Chemistry of Metals in Biological Systems, European Research Conference, Tomar, Portugal]. Three protein samples poised at different redox potentials (as-purified, 40 and 320 mV) were investigated. In all three samples, the [4Fe-4S] cluster was found to be present in the diamagnetic 2+ oxidation state and exhibited typical Mossbauer spectra. The novel-structure cluster was found to be redox active. In the 320-mV and as-purified samples, the cluster is at a redox equilibrium between its fully oxidized and one-electron reduced states. In the 40-mV sample, the cluster is in a two-electron reduced state. Distinct spectral components associated with the four Fe sites of cluster 2 in the three oxidation states were identified. The spectroscopic parameters obtained for the Fe sites reflect different ligand environments, making it possible to assign the spectral components to individual Fe sites. In the fully oxidized state, all four iron ions are high-spin ferric and antiferromagnetically coupled to form a diamagnetic S = 0 state. In the one-electron and two-electron reduced states, the reducing electrons were found to localize, consecutively, onto two Fe sites that are rich in oxygen/nitrogen ligands. Based on the X-ray structure and the Mossbauer parameters, attempts could be made to identify the reduced Fe sites. For the two-electron reduced cluster, EPR and Mossbauer data indicate that the cluster is paramagnetic with a nonzero interger spin. For the one-electron reduced cluster, the data suggest a half-integer spin of 9/2 Characteristic fine and hyperfine parameters for all four Fe sites were obtained. Structural implications and the nature of the spin-coupling interactions are discussed.

Pereira, A., W. Small, C. Krebs, P. Tavares, D. Edmondson, E. Theil, and B. Huynh. "{Direct spectroscopic and kinetic evidence for the involvement of a peroxodiferric intermediate during the ferroxidase reaction in fast ferritin mineralization}." Biochemistry. 37 (1998): 9871-9876. Abstract
Rapid freeze-quench (RFQ) Mossbauer and stopped-flow absorption spectroscopy were used to monitor the ferritin ferroxidase reaction using recombinant (apo) frog M ferritin; the initial transient ferric species could be trapped by the RFQ method using low iron loading (36 Fe2+/ferritin molecule). Biphasic kinetics of ferroxidation were observed and measured directly by the Mossbauer method; a majority (85%) of the ferrous ions was oxidized at a fast rate of similar to 80 s(-1) and the remainder at a much slower rate of similar to 1.7 s(-1). In parallel with the fast phase oxidation of the Fe2+ ions, a single transient iron species is formed which exhibits magnetic properties (diamagnetic ground state) and Mossbauer parameters (Delta E-Q = 1.08 +/- 0.03 mm/s and delta = 0.62 +/- 0.02 mm/s) indicative of an antiferromagnetically coupled peroxodiferric complex. The formation and decay rates of this transient diiron species measured by the RFQ Mossbauer method match those of a transient blue species (lambda(max) = 650 nm) determined by the stopped-flow absorbance measurement. Thus, the transient colored species is assigned to the same peroxodiferric intermediate. Similar transient colored species have been detected by other investigators in several other fast ferritins (H and M subunit types), such as the human H ferritin and the Escherichia coli ferritin, suggesting a similar mechanism for the ferritin ferroxidase step in all fast ferritins. Peroxodiferric complexes are also formed as early intermediates in the reaction of O-2 With the catalytic diiron centers in the hydroxylase component of soluble methane monooxygenase (MMOH) and in the D84E mutant of the R2 subunit of E. coli ribonucleotide reductase. The proposal that a single protein site, with a structure homologous to the diiron centers in MMOH and R2, is involved in the ferritin ferroxidation step is confirmed by the observed kinetics, spectroscopic properties, and purity of the initial peroxodiferric species formed in the frog M ferritin.
Tavares, P., AS Pereira, C. Krebs, N. Ravi, JJG Moura, I. Moura, and BH HUYNH. "{Spectroscopic characterization of a novel tetranuclear Fe cluster in an iron-sulfur protein isolated from Desulfovibrio desulfuricans}." Biochemistry. 37 (1998): 2830-2842. Abstract
Mossbauer and EPR spectroscopies were used to characterize the Fe clusters in an Fe-S protein isolated from Desulfovibrio desulfuricans (ATCC 27774). This protein was previously thought to contain hexanuclear Fe clusters, but a recent X-ray crystallographic measurement on a similar protein isolated from Desulfovibrio vulgaris showed that the protein contains two tetranuclear clusters, a cubane-type [4Fe-4S] cluster and a mixed-ligand cluster of novel structure [Lindley et al. (1997) Abstract, Chemistry of Metals in Biological Systems, European Research Conference, Tomar, Portugal]. Three protein samples poised at different redox potentials (as-purified, 40 and 320 mV) were investigated. In all three samples, the [4Fe-4S] cluster was found to be present in the diamagnetic 2+ oxidation state and exhibited typical Mossbauer spectra. The novel-structure cluster was found to be redox active. In the 320-mV and as-purified samples, the cluster is at a redox equilibrium between its fully oxidized and one-electron reduced states. In the 40-mV sample, the cluster is in a two-electron reduced state. Distinct spectral components associated with the four Fe sites of cluster 2 in the three oxidation states were identified. The spectroscopic parameters obtained for the Fe sites reflect different ligand environments, making it possible to assign the spectral components to individual Fe sites. In the fully oxidized state, all four iron ions are high-spin ferric and antiferromagnetically coupled to form a diamagnetic S = 0 state. In the one-electron and two-electron reduced states, the reducing electrons were found to localize, consecutively, onto two Fe sites that are rich in oxygen/nitrogen ligands. Based on the X-ray structure and the Mossbauer parameters, attempts could be made to identify the reduced Fe sites. For the two-electron reduced cluster, EPR and Mossbauer data indicate that the cluster is paramagnetic with a nonzero interger spin. For the one-electron reduced cluster, the data suggest a half-integer spin of 9/2 Characteristic fine and hyperfine parameters for all four Fe sites were obtained. Structural implications and the nature of the spin-coupling interactions are discussed.
1997
Karlovich, Alexei Yu. "Singular integral operators with regulated coefficients in reflexive Orlicz spaces." Siberian Mathematical Journal. 38.2 (1997): 253-266.Website
Casalis, L., L. Gregoratti, M. Kiskinova, G. Margaritondo, FMB Fernandes, RJ Silva, GR Morrison, and AW Potts. "First results from the ESCA microscopy beamline on ELETTRA." Surface and Interface Analysis. 25.5 (1997): 374-379. Abstract
n/a
Kacsuk, Péter, José C. Cunha, Gábor Dózsa, João Louren{\c c}o, Tibor Fadgyas, and Tiago Antão. "A graphical development and debugging environment for parallel programs." Parallel Comput.. 22 (1997): 1747-1770. AbstractWebsite
To provide high-level graphical support for PVM (Parallel Virtual Machine) based program development, a complex programming environment (GRADE) is being developed. GRADE currently provides tools to construct, execute, debug, monitor and visualise message-passing parallel programs. It offers high-level graphical programming abstraction mechanism to construct parallel applications by introducing a new graphical language called GRAPNEL. GRADE also provides the programmer with the same graphical user interface during the program design and debugging stages. A distributed debugging engine (DDBG) assists the user in debugging GRAPNEL programs on distributed memory computer architectures. Tape/PVM and PROVE support the performance monitoring and visualization of parallel programs developed in the GRADE environment.
vanWesenbeeck, MPN, JB Klaassens, U. vonStockhausen, AMD Anciola, and SS Valtchev. "A multiple-switch high-voltage DC-DC converter." IEEE Transactions on Industrial Electronics. IE-44 (1997): 780-787. AbstractWebsite
Series connection of power devices has evolved into a mature technique and is widely applied in HV dc systems. Static and dynamic voltage balance is ensured by shunting individual devices with dissipative snubbers. The snubber losses become pronounced for increased operating frequencies and adversely affect power density. Capacitive snubbers do not exhibit these disadvantages, but they require a zero-voltage switching mode. Super-resonant power converters facilitate the principle of zero-voltage switching. A high-voltage dc-dc power converter with multiple series-connected devices is proposed. It allows the application of nondissipating snubbers to assist the voltage sharing between the multiple series-connected devices and lowers turn-off losses. Simulation results obtained with a circuit simulator are validated in an experimental converter operating with two series-connected devices. The behavior of the series connection is examined for MOSFET's and insulated gate bipolar transistors (IGBT's) by both experimental work with a 2-kW prototype and computer simulation. Applications can be found in traction and heavy industry, where the soft-switching converter is directly powered from a high-voltage source.
Kordikowski, A., D. G. Robertson, M. Poliakoff, T. D. DiNoia, M. McHugh, and A. Aguiar-Ricardo. "Acoustic determination of the critical surfaces in the ternary systems CO2 + CH2F2 + CF3CH2F and CO + C2H4 + CH3CHCH2 and in their binary subsystems." Journal of Physical Chemistry B. 101.30 (1997): 5853-5862. AbstractWebsite
n/a
Kacsuk, Péter, José C. Cunha, Gábor Dózsa, João M. Lourenço, Tibor Fadgyas, and Tiago Antão. "A graphical development and debugging environment for parallel programs." Parallel Comput.. 22 (1997): 1747-1770. Abstractpar-comp97.pdfWebsite

To provide high-level graphical support for PVM (Parallel Virtual Machine) based program development, a complex programming environment (GRADE) is being developed. GRADE currently provides tools to construct, execute, debug, monitor and visualise message-passing parallel programs. It offers high-level graphical programming abstraction mechanism to construct parallel applications by introducing a new graphical language called GRAPNEL. GRADE also provides the programmer with the same graphical user interface during the program design and debugging stages. A distributed debugging engine (DDBG) assists the user in debugging GRAPNEL programs on distributed memory computer architectures. Tape/PVM and PROVE support the performance monitoring and visualization of parallel programs developed in the GRADE environment.