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2024
Sarmento, Célia, Ana Rita C. Duarte, and Ana Rita Jesus. "Can (Natural) deep eutectic systems increase the efficacy of ocular therapeutics?" European Journal of Pharmaceutics and Biopharmaceutics. 198 (2024): 114276. AbstractWebsite

The eye is one of the most complex organs in the human body, with a unique anatomy and physiology, being divided into anterior and posterior segments. Ocular diseases can occur in both segments, but different diseases affect different segments. Glaucoma and cataracts affect the anterior segment, while macular degeneration and diabetic retinopathy occur in the posterior segment. The easiest approach to treat ocular diseases, especially in the anterior segment, is through the administration of topical eye drops, but this route presents many constraints, namely precorneal dynamic and static ocular barriers. On the other hand, the delivery of drugs to the posterior segment of the eye is far more challenging and is mainly performed by the intravitreal route. However, it can lead to severe complications such as retinal detachment, endophthalmitis, increased intraocular pressure and haemorrhage. The design of new drug delivery systems for the anterior segment is very challenging, but targeting the posterior one is even more difficult and little progress has been made. In this review we will discuss various strategies including the incorporation of additives in the formulations, such as viscosity, permeability, and solubility enhancers, namely based on Deep eutectic systems (DES). Natural deep eutectic systems (NADES) have emerged to solve several problems encountered in pharmaceutical industry, regarding the pharmacokinetic and pharmacodynamic properties of drugs. NADES can contribute to the design of advanced technologies for ocular therapeutics, including hydrogels and nanomaterials. Here in, we revise some applications of (NA)DES in the development of new drug delivery systems that can be translated into the ophthalmology field.

Coutinho, Mathilda L., João Pedro Veiga, Andreia Ruivo, Teresa Pereira da Silva, Silvia Bottura-Scardina, Maria Margarida R. A. Lima, Carlos Pereira, Ana Carvalho Dias, Luis Dias, Peter Vandenabeele, and José C. Roseiro. "Characterization of Tableware from Fábrica de Loiça de Sacavém—Linking Analytical and Documental Research." Minerals. 14 (2024). AbstractWebsite

Fábrica de Loiça de Sacavém (ca. 1858–1994) was among the first to produce white earthenware in Portugal, becoming one of the country’s leading ceramic manufacturers during the late 19th to early 20th centuries. Research on white earthenware has accompanied the growing interest in post-industrial archaeology but is still poorly explored compared to more ancient ceramic productions. This study focused on the ceramic body, glazes, and colourants of tableware produced by Fábrica de Loiça de Sacavém during the first 50 years of its activity (1859–1910). A multi-analytical approach was selected to investigate the chemical and mineralogical composition of the ceramic body, glaze, and pigments using optical microscopy, variable-pressure scanning electron microscope energy-dispersive X-ray spectroscopy (VP-SEM-EDS), μ-Raman spectroscopy, μ-X-ray Diffraction (μ-XRD), and reflectance spectroscopy (hyperspectral image analysis). The studied tableware was produced with a Ca-poor siliceous–aluminous white earthenware ceramic body covered with transparent alkali lead or lead borosilicate glaze, and most colourants were complex Cr-based pigments. These results are in agreement with the little documental evidence from this period found in the manufacturer’s archives.

Domingues, Luis, Ana Rita C. Duarte, and Ana Rita Jesus. "How Can Deep Eutectic Systems Promote Greener Processes in Medicinal Chemistry and Drug Discovery?" Pharmaceuticals. 17 (2024). AbstractWebsite

Chemists in the medicinal chemistry field are constantly searching for alternatives towards more sustainable and eco-friendly processes for the design and synthesis of drug candidates. The pharmaceutical industry is one of the most polluting industries, having a high E-factor, which is driving the adoption of more sustainable processes not only for new drug candidates, but also in the production of well-established active pharmaceutical ingredients. Deep eutectic systems (DESs) have emerged as a greener alternative to ionic liquids, and their potential to substitute traditional organic solvents in drug discovery has raised interest among scientists. With the use of DESs as alternative solvents, the processes become more attractive in terms of eco-friendliness and recyclability. Furthermore, they might be more effective through making the process simpler, faster, and with maximum efficiency. This review will be focused on the role and application of deep eutectic systems in drug discovery, using biocatalytic processes and traditional organic chemical reactions, as new environmentally benign alternative solvents. Furthermore, herein we also show that DESs, if used in the pharmaceutical industry, may have a significant effect on lowering production costs and decreasing the impact of this industry on the quality of the environment.

Akalin, S. A., T. Mateus, G. Ribeiro, J. Deuermeier, T. Calmeiro, H. Águas, R. Martins, A. T. Vicente, MJ Mendes, and U. D. Yilmazer Menda. "Ultra-flexible, high-performing NAN transparent electrodes for bendable optoelectronic applications." Journal of Materials Science: Materials in Electronics. 35 (2024). AbstractWebsite
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2023
Dias, Inês J. G., Sofia A. Pádua, Eduardo A. Pires, João PMR Borges, Jorge C. Silva, and Carmo M. Lança. "Hydroxyapatite-Barium Titanate Biocoatings Using Room Temperature Coblasting." Crystals 2023, Vol. 13, Page 579. 13 (2023): 579. AbstractWebsite

The use of orthopaedic and dental implants is expanding as a consequence of an ageing population and also due to illness or trauma in younger age groups. The implant must be biocompatible, bioactive and interact favourably with the recipient's bone, as rapid osseointegration is key to success. In this work, Ti-6Al-4V plates were coated using the CoBlastTM technique, with hydroxyapatite (HAp) and HAp/BaTiO3 (barium titanate, BT) non-piezoelectric cubic nanopowders (HAp/cBT) and piezoelectric tetragonal micropowders (HAp/tBT). The addition of BT, a piezoelectric ceramic, is a strategy to accelerate osseointegration by using surface electric charges as cues for cells. For comparison with commercial coatings, plates were coated with HAp using the plasma spray technique. Using XRD and FTIR, both plasma spray and CoBlastTM coatings showed crystalline HAp and no presence of by-products. However, the XRD of the plasma-sprayed coatings revealed the presence of amorphous HAp. The average surface roughness was close to the coatings' thickness (≈5 $μ$m for CoBlastTM and ≈13 $μ$m for plasma spray). Cytotoxicity assays proved that the coatings are biocompatible. Therefore, it can be concluded that for HAp-based coatings, CoBlastTM is a viable alternative to plasma spray, with the advantage of facilitating room temperature addition of other ceramics, like piezoelectric BaTiO3.

Pessanha, Sofia, Alexandre Veiga, Delfim Doutel, Fernanda Silva, João Silva, Patrícia M. Carvalho, Sofia Barbosa, José Paulo Santos, Ana Félix, and Jorge Machado. "Evaluation of the influence of the formalin fixation time on the elemental content of tissues measured with X-ray fluorescence." Spectrochimica Acta Part B: Atomic Spectroscopy. 205 (2023): 106704. AbstractWebsite
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Machado, Jorge, Nancy Paul, Gabrielle Soum-Sidikov, Louis Duval, Stéphane Macé, Robert Loetzsch, Martino Trassinelli, and Paul Indelicato. "Absolute measurement of the relativistic magnetic dipole transition in He-like sulfur." Physical Review A. 107 (2023): 032821. AbstractWebsite
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Jesus, Ana Rita, Alexandre Paiva, and Ana Rita C. Duarte. "Current developments and future perspectives on biotechnology applications of natural deep eutectic systems." 39 (2023): 100731. AbstractWebsite

Natural Deep Eutectic Systems (NADES) have emerged in the past years as alternative solvents to traditional organic solvents and ionic liquids. NADES are easy to produce, sustainable, biocompatible, eco-friendly, remarkable solubilizing agents, and highly task-specific. The outstanding properties of this new liquid media have attracted the attention of researchers in the last decade in many fields and biotechnology is probably one of the fields where NADES have gained more relevance. Nonetheless, the progress beyond the state of the art in this field is not yet fully explored. Most research papers regarding the use of NADES in biotechnology are related to their use as solubility enhancers for poorly soluble active ingredients, particularly for pharmaceutical applications. However, the applicability of NADES in applications such as cryopreservation, stabilization of proteins and DNA, as well as other biomedical applications, has only recently been explored and presents still a plethora of discoveries to be unravelled. The current developments in this scientific field and future perspectives will be discussed herein.

Dias, Inês J. G., Sofia A. Pádua, Eduardo A. Pires, João PMR Borges, Jorge C. Silva, and Carmo M. Lança. "Hydroxyapatite-Barium Titanate Biocoatings Using Room Temperature Coblasting." 13.4 (2023): 579. Abstract
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Meunier, Emmanuelle, Filipa Dias, João Fonte, Alexandre Lima, Alexandra Rodrigues, Carlo Bottaini, Rui JC Silva, João P. Veiga, Manuel F. C. Pereira, and Elin Figueiredo. "Later prehistoric tin mining in the Ervedosa mine (Vinhais, Portugal): evidence and context." 15.4 (2023): 43. AbstractWebsite

This paper presents a comprehensive study of the evidence for ancient tin mining at the Ervedosa mine (Vinhais, Portugal). The geological context of the site indicates a rich cassiterite (SnO2) deposit, which was subject to mining in the twentieth century. Some ancient mining and ore processing stone tools were recovered during the twentieth century mining operations, namely one hammer, one pounder, one flat anvil and five small tools used both as pounders and crushing anvils, evidencing prehistoric mining activities. XRF and SEM–EDS chemical analyses were performed on primary and secondary cassiterite samples from the mining site, demonstrating the abundance and chemical heterogeneity of the tin (Sn) ores. The stone tools can be ascribed to Bronze Age or, at the latest, Early Iron Age (2nd millennium to the first half of 1st millennium BCE) by comparison with similar tools from other Iberian and European archaeological contexts. High-resolution photogrammetric 3D models of the tools are made available in this study. The historical descriptions of the findings and the research made on the technical archives about the mine allowed correlating the tools to mining in a primary context, focused on rich quartz veins in granitic or greisen bedrock, rather than mining in a secondary context. XRF and SEM–EDS analyses performed on the stone material and on surface adherences support their identification as specific types of hard rocks, such as granite, amphibolite and quartzite, and allowed the detection of Sn-rich adherent particles, confirming their use for Sn-material processing. The potential relation between the cassiterite resources and the local later prehistoric (Bronze Age to Early Iron Age) settlement pattern is also discussed. The results raise awareness and provide relevant data about the existence of tin mining in primary contexts during later prehistoric times in the NW Iberian Peninsula.

Silva, Ana B. P., Ana R. Jesus, Daniela A. S. Agostinho, José M. S. S. Esperança, Alexandre Paiva, Ana R. C. Duarte, and Patrícia M. Reis. "Using dicationic ionic liquids to upgrade the cytotoxicity and solubility of poorly water-soluble drugs." 3.1 (2023): 100052. AbstractWebsite

New dicationic ionic liquids (DcILs) based on carboxylic acid-derived, N-acetyl amino acid-derived or bromide anions, and ammonium cations were synthesized and characterized. DcILs were employed as co-solvents to improve the solubility of ibuprofen and ketoprofen belonging to BCS class II. These DcILs demonstrated to be less cytotoxic towards fibroblasts L929 cells and contributed to an augment in the solubility of both drugs when compared with monocationic ionic liquids (McILs). The cytotoxic profile of some of these ILs was established, and when the linker between two ammonium cations was an ether group or a short alkyl chain an IC50 higher than 200 mM for fibroblasts L929 cells was achieved. The anion structure showed to be a key factor in the solubility of both drugs, being the family of carboxylic acid-derived, the one that presented the most significant effect, followed by N-acetyl amino acid-derived and finally bromide. The two dimensional 1H1H– NOESY NMR spectra showed the interaction between the IL and the two oral drugs, responsible for the improvement of their solubility. The lipophilicity (logP) of ibuprofen and ketoprofen reduced in the presence of these new DcILs.

Dinis, Duarte Caldeira, José Rui Figueira, and Ângelo Palos Teixeira. "A multiple criteria approach for ship risk classification: An alternative to the Paris MoU Ship Risk Profile." Socio-Economic Planning Sciences. 90 (2023): 101718. AbstractWebsite
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Diening, Lars, Oleksiy Karlovych, and Eugene Shargorodsky. "Addendum to "On interpolation of reflexive variable Lebesgue spaces on which the Hardy–Littlewood maximal operator is bounded"." Georgian Mathematical Journal . 30.2 (2023): 211-212.Website
Moniz, António B., Marta Candeias, and Nuno Boavida. "Artificial Generative Intelligence and Work – Portugal." Generative Artificial Intelligence – Opportunities, Risks, and Policy Challenges. Eds. Bjørn Bedsted, Nicklas Bang Bådum, Reinhard Grünwald, Steffen Albrecht, Tore Tennøe, Ferran Domínguez, and Clara Marsan. Barcelona: EPTA, 2023. 70-77.report_en_2.pdf
Tavares, S., C. P. Brás, A. L. Custódio, V. Duarte, and P. Medeiros. "Parallel strategies for Direct Multisearch." Numerical Algorithms. 92 (2023): 1757-1788.
Dimitrova, I., Vítor H. Fernandes, J. Koppitz, and T. M. Quinteiro. "Presentations for three remarkable submonoids of the dihedral inverse monoid on a finite set." Semigroup Forum (DOI 10.1007/s00233-023-10396-5; Online 31 Oct 2023). 107 (2023): 315-338. AbstractWebsite

In this paper we consider the submonoids OPDI_n, MDI_n and ODI_n of the dihedral inverse monoid DI_n of all orientation-preserving, monotone and order-preserving transformations, respectively. Our goal is to exhibit presentations for each of these three monoids.

Dias, I. J. G. J. G., A. S. S. Pádua, E. Pires, J. P. M. R. Borges, Jorge C. Silva, and MC Lança. "TSDC and surface potential measurements of charged hydroxyapatite/BaTiO 3 biocoatings deposited by CoBlast." ISE19-19th Int Symp on Electrets, 18-22 Sept. Linz, Austria: Johannes Kepler Univ., 2023. 77. Abstract

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Dias, Ana Margarida Gonçalves Carvalho, Inês Pimentel Moreira, Iana Lychko, Cátia Lopes Soares, Arianna Nurrito, Arménio Jorge Moura Barbosa, Viviane Lutz-Bueno, Raffaele Mezzenga, Ana Luísa Carvalho, Ana Sofia Pina, and Ana Cecília Afonso Roque. "Hierarchical self-assembly of a reflectin-derived peptide." Frontiers in Chemistry. 11 (2023). AbstractWebsite

Reflectins are a family of intrinsically disordered proteins involved in cephalopod camouflage, making them an interesting source for bioinspired optical materials. Understanding reflectin assembly into higher-order structures by standard biophysical methods enables the rational design of new materials, but it is difficult due to their low solubility. To address this challenge, we aim to understand the molecular self-assembly mechanism of reflectin’s basic unit—the protopeptide sequence YMDMSGYQ—as a means to understand reflectin’s assembly phenomena. Protopeptide self-assembly was triggered by different environmental cues, yielding supramolecular hydrogels, and characterized by experimental and theoretical methods. Protopeptide films were also prepared to assess optical properties. Our results support the hypothesis for the protopeptide aggregation model at an atomistic level, led by hydrophilic and hydrophobic interactions mediated by tyrosine residues. Protopeptide-derived films were optically active, presenting diffuse reflectance in the visible region of the light spectrum. Hence, these results contribute to a better understanding of the protopeptide structural assembly, crucial for the design of peptide- and reflectin-based functional materials.

Barreira, António, Andreia F. M. Santos, Madalena Dionísio, Ana R. Jesus, Ana Rita C. Duarte, Željko Petrovski, Ana B. Paninho, Márcia G. Ventura, and Luis C. Branco. "Ionic Levothyroxine Formulations: Synthesis, Bioavailability, and Cytotoxicity Studies." International Journal of Molecular Sciences. 24 (2023). AbstractWebsite

Thyroid diseases affect a considerable portion of the population, with hypothyroidism being one of the most commonly reported thyroid diseases. Levothyroxine (T4) is clinically used to treat hypothyroidism and suppress thyroid stimulating hormone secretion in other thyroid diseases. In this work, an attempt to improve T4 solubility is made through the synthesis of ionic liquids (ILs) based on this drug. In this context, [Na][T4] was combined with choline [Ch]+ and 1-(2-hydroxyethyl)-3-methylimidazolium [C2OHMiM]+ cations in order to prepare the desired T4-ILs. All compounds were characterized by NMR, ATR-FTIR, elemental analysis, and DSC, aiming to check their chemical structure, purities, and thermal properties. The serum, water, and PBS solubilities of the T4-ILs were compared to [Na][T4], as well as the permeability assays. It is important to note an improved adsorption capacity, in which no significant cytotoxicity was observed against L929 cells. [C2OHMiM][T4] seems to be a good alternative to the commercial levothyroxine sodium salt with promising bioavailability.

Díaz, Rafael Sanabria, Brisid Isufi, Leandro Mouta Trautwein, and António Pinho Ramos. "Nonlinear analysis of flat slab-column connections to optimize the use of HPFRC under monotonic vertical loading." Structural Concrete. 24 (2023): 5787-5807. AbstractWebsite
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Pinheiro, A., A. Ruivo, J. Rocha, M. Ferro, JV Pinto, J. Deuermeier, T. Mateus, A. Santa, MJ Mendes, R. Martins, S. Gago, C. A. T. Laia, and H. Águas. "Parylene-Sealed Perovskite Nanocrystals Down-Shifting Layer for Luminescent Spectral Matching in Thin Film Photovoltaics." Nanomaterials. 13 (2023). AbstractWebsite
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Duarte, Marlene, Victor D. Alves, Márcia Correia, Catarina Caseiro, Luís M. A. Ferreira, Maria João Romão, Ana Luísa Carvalho, Shabir Najmudin, Edward A. Bayer, Carlos M. G. A. Fontes, and Pedro Bule. "Structure-function studies can improve binding affinity of cohesin-dockerin interactions for multi-protein assemblies." International Journal of Biological Macromolecules. 224 (2023): 55-67. AbstractWebsite

The cellulosome is an elaborate multi-enzyme structure secreted by many anaerobic microorganisms for the efficient degradation of lignocellulosic substrates. It is composed of multiple catalytic and non-catalytic components that are assembled through high-affinity protein-protein interactions between the enzyme-borne dockerin (Doc) modules and the repeated cohesin (Coh) modules present in primary scaffoldins. In some cellulosomes, primary scaffoldins can interact with adaptor and cell-anchoring scaffoldins to create structures of increasing complexity. The cellulosomal system of the ruminal bacterium, Ruminococcus flavefaciens, is one of the most intricate described to date. An unprecedent number of different Doc specificities results in an elaborate architecture, assembled exclusively through single-binding-mode type-III Coh-Doc interactions. However, a set of type-III Docs exhibits certain features associated with the classic dual-binding mode Coh-Doc interaction. Here, the structure of the adaptor scaffoldin-borne ScaH Doc in complex with the Coh from anchoring scaffoldin ScaE is described. This complex, unlike previously described type-III interactions in R. flavefaciens, was found to interact in a dual-binding mode. The key residues determining Coh recognition were also identified. This information was used to perform structure-informed protein engineering to change the electrostatic profile of the binding surface and to improve the affinity between the two modules. The results show that the nature of the residues in the ligand-binding surface plays a major role in Coh recognition and that Coh-Doc affinity can be manipulated through rational design, a key feature for the creation of designer cellulosomes or other affinity-based technologies using tailored Coh-Doc interactions.

Menda, U. D., G. Ribeiro, J. Deuermeier, E. López, D. Nunes, S. Jana, I. Artacho, R. Martins, I. Mora-Seró, MJ Mendes, and I. Ramiro. "Thermal-Carrier-Escape Mitigation in a Quantum-Dot-In-Perovskite Intermediate Band Solar Cell via Bandgap Engineering." ACS Photonics. 10 (2023): 3647-3655. AbstractWebsite
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Pinheiro, Ana, Andreia Ruivo, Marta Ferro, Joana Vaz Pinto, Jonas Deuermeier, Tiago Mateus, Ana Santa, Manuel J. Mendes, Rodrigo Martins, Sandra Gago, C. A. T. Laia, and Á. Hugo. "{Parylene-Sealed Perovskite Nanocrystals Down-Shifting Layer for Luminescent Spectral Matching in Thin Film Photovoltaics}." (2023). Abstract
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Duval, Louis, Rοbert Loetzsch, Heinrich Beyer, Dariusz Banaś, Perla Dergham, Jan Glorius, Robert E. Grisenti, Mauro Guerra, Alexandre Gumberidze, Pierre-Michel Hillenbrand, Paweł Jagodziński, Emily Lamour, Yuri Litvinov, Jorge Machado, Gerhard Paulus, Nancy Paul, Nikolaos Petridis, Jose-Paulo Santos, Marius Scheidel, Ragandeep S. Sidhu, Uwe Spillmann, Sébastien Steydli, Karol Szary, Sergiy Trotsenko, Ingo Uschmann, Günther Weber, Thomas Stöhlker, Paul Indelicato, and Martino Trassinelli. "{X-ray spectroscopy of few-electron uranium ions for tests of QED}." Proceedings of FAIR next generation scientists - 7th Edition Workshop — PoS(FAIRness2022). Vol. 419. 2023. 012. Abstract
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