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2011
Carvalho, Helena, Susana Duarte, and Cruz V. Machado. "Lean, agile, resilient and green: divergencies and synergies." International Journal of Lean Six Sigma. 2 (2011): 151-179. AbstractWebsite

Purpose – This paper aims to explore the divergences and commitments between the lean, agile, resilient and green paradigms while investigating the effect of paradigms' practices within supply chain attributes.
Design/methodology/approach – A conceptual model with lean, agile, resilient and green practices and supply chain management attributes is proposed. Causal diagrams were used to represent the relationships between paradigm practices and supply chain attributes. The four diagrams were aggregated to build the conceptual model.
Findings – The conceptual model allows for the identification of synergies and divergences resulting from the paradigms practices implementation. The synergies between paradigms are related to “information frequency” and “integration level” increasing as well as reduction of “production lead time” and “transportation lead time”. However, other supply chain attributes such as “capacity surplus”, “inventory level” and “replenishment frequency” are affected in opposite directions by some paradigms creating divergences.
Research limitations/implications – The model relationships were established using an anecdotal approach derived from the literature review, reflecting only a partial view of supply chain dynamics. More research related to other supply chain attributes and/or paradigm practices, and validation of the proposed relationships is suggested.
Practical implications – The proposed model can be the basis for further research in lean, agile, resilient and green paradigms, contributing to a more sustainable and competitive lean supply chain with the necessary agility toward a quick response, resiliency to disruptions, and harmonization with the ecologic and environmental aspects. Originality/value – To the authors' knowledge this paper is the first to provide an understanding about the tradeoffs among lean, agile, resilient and green supply chain paradigms.

Cunha, Jácome Model-Based Spreadsheet Engineering. University of Minho, 2011. Abstractthesis.pdf

Spreadsheets can be viewed as programming languages for non-professional programmers. These so-called ``end-user'' programmers vastly outnumber professional programmers creating millions of new spreadsheets every year. As a programming language, spreadsheets lack support for abstraction, testing, encapsulation, or structured programming. As a result, and as numerous studies have shown, the high rate of production is accompanied by an alarming high rate of errors. Some studies report that up to 90% of real-world spreadsheets contain errors. After their initial creation, many spreadsheets turn out to be used for storing and processing increasing amounts of data and supporting increasing numbers of users over long periods of time, making them complicated systems. An emerging solution to handle the complex and evolving software systems is Model-driven Engineering (MDE). To consider models as first class entities and any software artifact as a model or a model element is one of the basic principles of MDE. We adopted some techniques from MDE to solve spreadsheet problems. Most spreadsheets (if not all) lack a proper specification or a model. Using reverse engineering techniques we are able to derive various models from legacy spreadsheets. We use functional dependencies (a formalism that allow us to define how some column values depend on other column values) as building blocks for these models. Models can be used for several spreadsheet improvements, namely refactoring, safe evolution, migration or even generation of edit assistance. The techniques presented in this work are available under the framework HAEXCEL that we developed. It is composed of online and batch tools, reusable HASKELL libraries and OpenOffice.org extensions. A study with several end-users was organized to survey the impact of the techniques we designed. The results of this study indicate that the models can bring great benefits to spreadsheet engineering helping users to commit less errors and to work faster.

Beckwith, Laura, Jácome Cunha, João Paulo Fernandes, and João Saraiva. "End-users Productivity in Model-based Spreadsheets: An Empirical Study." Proceedings of the Third International Symposium on End-User Development. Eds. M. Costabile, Y. Dittrich, G. Fischer, and A. Piccinno. IS-EUD '11. Heidelberg: Springer, 2011. 282-288. Abstractiseud11.pdf

Spreadsheetsarewidelyusedandstudiesshowthatmostoftheexisting ones contain non-trivial errors. To improve end-users productivity, recent research proposes the use of a model-driven engineering approach to spreadsheets. In this paper we conduct the first empirical study to assess the effectiveness and efficiency of this approach. A set of spreadsheet end users worked with two different model-based spreadsheets. We present and analyze here the results achieved.

Pina, J. M., D. Inacio, G. Luis, J. M. Ceballos, P. Pereira, J. Martins, M. Ventim-Neves, A. Alvarez, and A. L. Rodrigues. "Research and Development of Alternative Concepts in HTS Machines." Applied Superconductivity, IEEE Transactions on. 21 (2011): 1141-1145. Abstract

High temperature superconducting (HTS) machines are recognized to offer several advantageous features when comparing to conventional ones. Amongst these, highlights the decrease in weight and volume of the machines, due to increased current density in conductors or the absence of iron slots' teeth; or the decrease in AC losses and consequent higher efficiency of the machines, even accounting for cryogenics. These concepts have been already demonstrated and some machines have even achieved commercial stage. In this paper, several alternative approaches are applied to electrical motors employing HTS materials. The first one is an all superconducting linear motor, where copper conductors and permanent magnets are replaced by Bi-2223 windings and trapped flux magnets, taking advantage of stable levitation due to flux pinning, higher current densities and higher excitation field. The second is an induction disk motor with Bi-2223 armature, where iron, ironless and hybrid approaches are compared. Finally, an innovative command strategy, consisting of an electronically variable pole pairs' number approach, is applied to a superconducting hysteresis disk motor. All these concepts are being investigated and simulation and experimental results are presented.

Oliveira, Joana, Nuno Mateus, Jose E. Rodriguez-borges, Eurico J. Cabrita, Artur M. S. Silva, and Victor de Freitas. "Synthesis of a new pyranoanthocyanin dimer linked through a methyl-methine bridge." Tetrahedron Letters. 52 (2011): 2957-2960. Abstract
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Cruz, Carla, Eurico J. Cabrita, and Joao A. Queiroz. "Analysis of nucleotides binding to chromatography supports provided by nuclear magnetic resonance spectroscopy." Journal of Chromatography a. 1218 (2011): 3559-3564. Abstract
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Alberty Vieira, L., F. M. Braz Fernandes, R. M. Miranda, R. J. C. Silva, L. Quintino, A. Cuesta, and J. L. Ocana. "Mechanical behaviour of Nd:YAG laser welded superelastic NiTi." Materials Science and Engineering a-Structural Materials Properties Microstructure and Processing. 528.16-17 (2011): 5560-5565. Abstract
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dos Santos, Amarante F. P., and C. Cismasiu. "Bridge hinge-restrainers built up of NiTi superelastic shape-memory alloys." Smart Structures and Materials (SMART'11). 5th ECCOMAS Thematic Conference on Smart Structures and Materials SMART'11. Saarbrücken, Germany 2011. Abstractsantos_2011.pdf

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Beckwith, Laura, Jácome Cunha, João Paulo Fernandes, and João Saraiva. "An Empirical Study on End-users Productivity Using Model-based Spreadsheets." Proceedings of the European Spreadsheet Risks Interest Group. Eds. Simon Thorne, and Grenville Croll. EuSpRIG '11. 2011. 87-100. Abstracteusprig11.pdf

Spreadsheets are widely used, and studies have shown that most end-user spreadsheets contain non-trivial errors. To improve end-users productivity, recent research proposes the use of a model-driven engineering approach to spreadsheets. In this paper we conduct the first systematic empirical study to assess the effectiveness and efficiency of this approach. A set of spreadsheet end users worked with two different model-based spreadsheets, and we present and analyze here the results achieved.

Viegas, Aldino, Joao Manso, Franklin L. Nobrega, and Eurico J. Cabrita. "Saturation-Transfer Difference (STD) NMR: A Simple and Fast Method for Ligand Screening and Characterization of Protein Binding." Journal of Chemical Education. 88 (2011): 990-994. AbstractWebsite

Saturation transfer difference (STD) NMR has emerged as one of the most popular ligand-based NMR techniques for the study of protein−ligand interactions. The success of this technique is a consequence of its robustness and the fact that it is focused on the signals of the ligand, without any need of processing NMR information about the receptor and only using small quantities of nonlabeled macromolecule. Moreover, the attractiveness of this experiment is also extendable to the classroom. In the context of a practical NMR class, this experiment is ideal to illustrate some fundamental NMR concepts, such as the nuclear Overhauser effect and relaxation in a multidisciplinary context, bridging chemistry and biochemistry with a taste of medicinal chemistry.

We use the readily available human serum albumin (HSA), 6-d,l-methyl-tryptophan (6-CH3-Trp), and 7- d,l-methyl-tryptophan (7-CH3-Trp) to introduce the STD-NMR experiment and to illustrate its applicability for ligand screening, mapping of binding moieties, and determination of the dissociation constant, in a context that can be explored or adapted to the student’s course level and topic (chemistry or biochemistry). We also cover the most important theoretical aspects of the STD experiment, calling attention to some of its limitations and drawbacks without a complex theoretical approach.

Fievet, A., L. My, E. Cascales, M. Ansaldi, S. R. Pauleta, I. Moura, Z. Dermoun, C. S. Bernard, A. Dolla, and C. Aubert. "The Anaerobe-Specific Orange Protein Complex of Desulfovibrio vulgaris Hildenborough Is Encoded by Two Divergent Operons Coregulated by sigma(54) and a Cognate Transcriptional Regulator." Journal of Bacteriology. 193 (2011): 3207-3219. AbstractWebsite

Analysis of sequenced bacterial genomes revealed that the genomes encode more than 30% hypothetical and conserved hypothetical proteins of unknown function. Among proteins of unknown function that are conserved in anaerobes, some might be determinants of the anaerobic way of life. This study focuses on two divergent clusters specifically found in anaerobic microorganisms and mainly composed of genes encoding conserved hypothetical proteins. We show that the two gene clusters DVU2103-DVU2104-DVU2105 (orp2) and DVU2107-DVU2108-DVU2109 (orp1) form two divergent operons transcribed by the sigma(54)-RNA polymerase. We further demonstrate that the sigma(54)-dependent transcriptional regulator DVU2106, located between orp1 and orp2, collaborates with sigma(54)-RNA polymerase to orchestrate the simultaneous expression of the divergent orp operons. DVU2106, whose structural gene is transcribed by the sigma(70)-RNA polymerase, negatively retrocontrols its own expression. By using an endogenous pulldown strategy, we identify a physiological complex composed of DVU2103, DVU2104, DVU2105, DVU2108, and DVU2109. Interestingly, inactivation of DVU2106, which is required for orp operon transcription, induces morphological defects that are likely linked to the absence of the ORP complex. A putative role of the ORP proteins in positioning the septum during cell division is discussed.

Ferreira, Isabel, Bruno Bras, Jose Inacio Martins, Nuno Correia, Pedro Barquinha, Elvira Fortunato, and Rodrigo Martins. "Solid-state paper batteries for controlling paper transistors." Electrochimica Acta. 56 (2011): 1099-1105. AbstractWebsite
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Cabral, Izunildo; Espadinha-Cruz, Pedro; Grilo, António; Puga-Leal, Rogério; Cruz-Machado, Virgílio Cruz-Machado, and Virgílio. "Decision-making models for interoperable lean, agile, resilient and green supply chains." The International Symposium on the Analytic Hierarchy Process. 2011. -. Abstract
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R., Neagu E., C. Dias, Lança M. Carmo, Igreja R., Inacio P., and Marat-Mendes J. N. "Discrimination between Space Charge and Dipolar Contributions in Ferroelectric Polymers." International Symposium on Electrets. 2011. 145-146. Abstract
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M.C., LANÇA, NEAGU E.R., DIAS C.J., GIL L., and MARAT-MENDES J.N. "Electrical properties of cork and derivatives." 23 (2011): 64-70. Abstract
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Araújo, R., R. Castanhinha, and O. Mateus. "Evolutionary major trends of ornithopod dinosaurs teeth." Dinosaurios y paleontología desde América Latina. Ed. Gonzalez Riga Dos Santos(scientific B. D. y editors) J.Calvo, J. Porfiri. EDIUNC, Editorial de la Universidad Nacional de Cuyo, 2011. 25-31. Abstractaraujo_et_al_2011_evolutionary_major_trends_of_ornithopod_dinosaurs_teeth.pdf

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Duarte, Susana, {Maria Rosário Meireles Ferreira} do de Cabrita, and {Virgílio António Cruz} Machado. "Exploring Lean and Green Supply Chain Performance Using Balanced Scorecard Perspective." Proceedings of the 2011 International Conference on Industrial Engineering and Operations Management (IEOM). IEOM Research Solutions Pty Ltd, 2011. 520-525. Abstract

Going lean/green is a trend more manufacturers are beginning to recognize as important in an era of economic aus-terity and environmental responsibility. Unlike lean supply chain, which focuses on ways to improve operations and cut wastes from the customer's perspective, green initiatives look at ways to eliminate waste from the environment's perspective. Looking at operations from a ‘lean/green' perspective has benefits to not only the environment, but to manufacturers and customers as well. Based on the literature review we developed a conceptual model incorporating lean and green supply chain into a performance measurement system, using the balanced scorecard approach.

A., Pedrosa, LANÇA M.C., Borges J.P., NEAGU E.R., DIAS C.J., Marat-Mendes, and J.N. "Influence of Polarization on the Bioactivity of Nanopowders of Hydroxyapatite." International Symposium on Electrets. 2011. 55-56. Abstract
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Cabral, Izunildo; Grilo, António; Puga-Leal, Rogério; Cruz-Machado, and Virgílio. "An Information Model in Lean, Agile, Resilient and Green Supply Chains." IEEE - International Conference on Communication Software and Networks (ICCSN). 2011. 776-780. Abstract
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Carvalho, Helena, Susana Duarte, and Cruz} {V. Machado. "Lean, agile, resilient and green: divergencies and synergies." International Journal Of Lean Six Sigma. 2 (2011): 151-179. Abstract

Purpose - This paper aims to explore the divergences and commitments between the lean, agile, resilient and green paradigms while investigating the effect of paradigms’ practices within supply chain attributes. Design/methodology/approach - A conceptual model with lean, agile, resilient and green practices and supply chain management attributes is proposed. Causal diagrams were used to represent the relationships between paradigm practices and supply chain attributes. The four diagrams were aggregated to build the conceptual model. Findings - The conceptual model allows for the identification of synergies and divergences resulting from the paradigms practices implementation. The synergies between paradigms are related to “information frequency” and “integration level” increasing as well as reduction of “production lead time” and “transportation lead time”. However, other supply chain attributes such as “capacity surplus”, “inventory level” and “replenishment frequency” are affected in opposite directions by some paradigms creating divergences. Research limitations/implications - The model relationships were established using an anecdotal approach derived from the literature review, reflecting only a partial view of supply chain dynamics. More research related to other supply chain attributes and/or paradigm practices, and validation of the proposed relationships is suggested. Practical implications - The proposed model can be the basis for further research in lean, agile, resilient and green paradigms, contributing to a more sustainable and competitive lean supply chain with the necessary agility toward a quick response, resiliency to disruptions, and harmonization with the ecologic and environmental aspects. Originality/value - To the authors’ knowledge this paper is the first to provide an understanding about the tradeoffs among lean, agile, resilient and green supply chain paradigms.

Cruz, Pedro; Grilo, António; Puga-Leal, Rogério; Cruz-Machado, and Virgílio. "A Model For Evaluating Lean, Agile, Resilient and Green Practices Interoperability in Supply Chains." IEEE International Conference on Industrial Engineering and Engineering Management (IEEM). 2011. 1209-1213. Abstract
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Cabral, Izunildo; Grilo, António; Puga-Leal, Rogério; Cruz-Machado, and Virgílio. "Modelling Lean, Agile, Resilient, and Green Supply Chain Management." International Conference on Information Technology Interfaces. 2011. 365-370. Abstract
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Mateus, O., R. Araújo, C. Natário, and R. Castanhinha. "A new specimen of the theropod dinosaur Baryonyx from the early Cretaceous of Portugal and taxonomic validity of Suchosaurus." Zootaxa. 2827 (2011): 54-68. Abstractmateus_et_al_2011_a_new_specimen_of_the_theropod_dinosaur_baryonyx_from_the_early_cretaceous_of_portugal_and_taxonomic_validity_of_suchosaurus.pdf

Although the Late Jurassic of Portugal has provided abundant dinosaur fossils, material from the Early Cretaceous is scarce. This paper reports new cranial and postcranial material of the theropod dinosaur Baryonyx walkeri found in the Barremian (Papo Seco Formation) of Portugal. This specimen, found at Praia das Aguncheiras, Cabo Espichel, consists of a partial dentary, isolated teeth, pedal ungual, two calcanea, presacral and caudal vertebrae, fragmentary pubis, scapula, and rib fragments. It represents the most complete spinosaurid yet discovered in the Iberian Peninsula and the most complete dinosaur from the Early Cretaceous of Portugal. This specimen is confidently identified as a member of Baryonychinae due to the presence of conical teeth with flutes and denticles in a dentary rosette. The specimen ML1190 shares the following characteristics with Baryonyx walkeri: enamel surface with small (nearly vertical) wrinkles, variable denticle size along the carinae, 6–7 denticles per mm, wrinkles forming a 45 degree angle near the carinae, and tooth root longer than crown. In addition, dubious taxa based on teeth morphology such as Suchosaurus cultridens (Owen, 1840–1845), and Suchosaurus girardi (Sauvage 1897–98; Antunes & Mateus 2003) are discussed, based on comparisons with well-known material such as Baryonyx walkeri Charig & Milner, 1986. Suchosaurus cultridens and S. girardi are considered as nomina dubia due to the lack of diagnostic apomorphies, but both specimens are referred to Baryonychinae incertae sedis.

ER, Neagu, Dias CJ, Lança MC, Igreja R, Inacio P, and Marat-Mendes J. N. "The use of the final thermally stimulated discharge current technique to study the molecular movements around glass transition." 354 (2011): 385-390. Abstract
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