Publications

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2022
Rodrigues, Pedro, Rafael S. Costa, and Rui Henriques. "Enrichment analysis on regulatory subspaces: a novel direction for the superior description of cellular responses to SARS-CoV-2." Computers in Biology and Medicine. 146 (2022): 105443. Abstract
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Pinto, José, Mykaella Mestre, J. Ramos, Rafael S. Costa, Gerald Striedner, and Rui Oliveira. "A general deep hybrid model for bioreactor systems: Combining first principles with deep neural networks." Computers & Chemical Engineering. 165 (2022): 107952. Abstract
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Mochão, Hugo, Daniel Gonçalves, Leonardo Alexandre, Carolina Castro, Duarte Valério, Pedro Barahona, Daniel Moreira-Gonçalves, Paulo Matos da Costa, Rui Henriques, Lúcio L. Santos, and others. "IPOscore: An interactive web-based platform for postoperative surgical complications analysis and prediction in the oncology domain." Computer Methods and Programs in Biomedicine. 219 (2022): 106754. Abstract
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Pinto, José, João Antunes, João Ramos, Rafael S. Costa, and Rui Oliveira. "Modeling and optimization of bioreactor processes." Current Developments in Biotechnology and Bioengineering. Elsevier, 2022. 89-115. Abstract
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2021
Alexandre, Leonardo, Rafael S. Costa, and Rui Henriques. "DI2: prior-free and multi-item discretization of biological data and its applications." BMC bioinformatics. 22 (2021): 1-19. Abstract
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Alexandre, Leonardo, Rafael S. Costa, Lúcio Lara Santos, and Rui Henriques. "Mining pre-surgical patterns able to discriminate post-surgical outcomes in the oncological domain." IEEE Journal of Biomedical and Health Informatics. 25 (2021): 2421-2434. Abstract
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Gonçalves, Daniel, Rui Henriques, Lúcio Lara Santos, and Rafael S. Costa. "On the predictability of postoperative complications for cancer patients: a Portuguese cohort study." BMC Medical Informatics and Decision Making. 21 (2021): 1-13. Abstract
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Patr{\'ıcio, André, Rafael S. Costa, Rui Henriques, and others. "Predictability of COVID-19 hospitalizations, intensive care unit admissions, and respiratory assistance in Portugal: longitudinal cohort study." Journal of Medical Internet Research. 23 (2021): e26075. Abstract
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Gonçalves, Daniel M., Rui Henriques, and Rafael S. Costa. "Predicting postoperative complications in cancer patients: a survey bridging classical and machine learning contributions to postsurgical risk analysis." Cancers. 13 (2021): 3217. Abstract
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