PLP: Projection to latent pathways

PLP is a MATLAB algorithm for the identification of a minimal set of metabolic pathways with maximal correlation with environmental factors. This algorithm is free for academic research. A free version is available upon request. Send a message to email: to request a free version.

Publications with this algorithm

  • Inês A. Isidro, Ana R. Ferreira, João J. Clemente, António E. Cunha, Rui Oliveira (2016) Analysis of culture media screening data by projection to latent pathways: The case of Pichia pastoris X-33, Journal of Biotechnology, Volume 217, 10 January 2016, Pages 82–89
  • Teixeira, A.P., Dias, J.M.L., Carinhas, N., Sousa, M., Clemente, J.J., Cunha, A.E., von Stosch, M., Alves, P.M., Carrondo, M.J.T., Oliveira, R. Cell functional enviromics: unravelling the function of environmental factors (2011) BMC Systems Biology, 5, art. no. 92
  • Ferreira, A.R., Dias, J.M.L, Teixeira, A.P., Carinhas, N., Portela, R.M.C, Isidro, I.A., von Stosch, M., Oliveira, R. Projection to latent pathways (PLP): a constrained projection to latent variables (PLS) method for elementary flux modes discrimination (2011) BMC Systems Biology, 5:181