Publications

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Submitted
Freitas, F., J. Pais, V. D. Alves, M. Carvalheira, N. Costa, R. Oliveira, and M. A. M. Reis. "{Conversion of Glycerol-rich Product (GRP) into Biopolymers}." {CLEAN TECHNOLOGY 2008: BIO ENERGY, RENEWABLES, GREEN BUILDING, SMART GRID, STORAGE, AND WATER}. Eds. M. {Laudon, B. Romanowicz, and DL} Laird. {Clean Technol & Sustainable Ind Org; Greenberg Traurig LLP; Jackson Walker LLP; IDA Ireland; Opportunity Houston; Alston & Bird LLP; K & L Gates; Buchanan Ingersoll & Rooney PC; Foley & Larder, LLP; Pacific Crest Securities; RockPort Capital Partners; Fi, Submitted. {552-553}. Abstract
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Lopes Dias, Joao Miguel, Paulo Lemos, Luisa Serafim, Adrian Oehmen, Maria A. M. Reis, and Rui Oliveira. "{Development and implementation of a non-parametric/metabolic model in the process optimisation of PHA production by mixed microbial cultures}." {17TH EUROPEAN SYMPOSIUM ON COMPUTER AIDED PROCESS ENGINEERING}. Eds. V. {Plesu, and PS} Agachi. Vol. {24}. {Computer-Aided Chemical Engineering}, {24}. {Univ Bucharest; Univ Cluj Napoca}, Submitted. {995-1000}. Abstract
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Peres, J., F. Freitas, M. A. M. Reis, S. Feyo de Azevedo, and R. Oliveira. "{Hybrid modular mechanistic/ANN modelling of a wastewater phosphorus removal process}." {16TH EUROPEAN SYMPOSIUM ON COMPUTER AIDED PROCESS ENGINEERING AND 9TH INTERNATIONAL SYMPOSIUM ON PROCESS SYSTEMS ENGINEERING}. Eds. W. {Marquardt, and C. } Pantelides. Vol. {21}. {Computer-Aided Chemical Engineering}, {21}. Submitted. {1717-1722}. Abstract
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Galinha, C. F., G. Carvalho, C. A. M. Portugal, G. Guglielmi, R. Oliveira, J. G. Crespo, and M. A. M. Reis. "{Real-time monitoring of membrane bioreactors with 2D-fluorescence data and statistically based models}." {WATER SCIENCE AND TECHNOLOGY}. {63} (Submitted): {1381-1388}. Abstract
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Alves, Vitor D., Filomena Freitas, Cristiana A. V. Torres, Madalena Cruz, Rodolfo Marques, Christian Grandfils, M. P. Goncalves, Rui Oliveira, and Maria A. M. Reis. "{Rheological and morphological characterization of the culture broth during exopolysaccharide production by Enterobacter sp. (vol 80, pg 325, 2010)}." {CARBOHYDRATE POLYMERS}. {80} (Submitted): {325}. Abstract
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Dias, Joao M. L., Filipa Pardelha, Mario Eusebio, Maria A. M. Reis, and Rui Oliveira. "{On-line monitoring of PHB production by mixed microbial cultures using respirometry, titrimetry and chemometric modelling}." {PROCESS BIOCHEMISTRY}. {44} (Submitted): {419-427}. Abstract
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Pardelha, F., M. G. E. Albuquerque, G. Carvalho, M. A. M. Reis, J. M. L. Dias, and R. Oliveira. "{Segregated flux balance analysis constrained by population structure/function data: The case of PHA production by mixed microbial cultures}." {BIOTECHNOLOGY AND BIOENGINEERING}. {110} (Submitted): {2267-2276}. Abstract
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Torres, Cristiana A. V., Rodolfo Marques, Silvia Antunes, Vitor D. Alves, Isabel Sousa, Ana Maria Ramos, Rui Oliveira, Filomena Freitas, and Maria A. M. Reis. "{Kinetics of production and characterization of the fucose-containing exopolysaccharide from Enterobacter A47}." {JOURNAL OF BIOTECHNOLOGY}. {156} (Submitted): {261-267}. Abstract
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Pardelha, Filipa, Maria G. E. Albuquerque, Maria A. M. Reis, Joao M. L. Dias, and Rui Oliveira. "{Flux balance analysis of mixed microbial cultures: Application to the production of polyhydroxyalkanoates from complex mixtures of volatile fatty acids}." {JOURNAL OF BIOTECHNOLOGY}. {162} (Submitted): {336-345}. Abstract
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Carrondo, Manuel J. T., Paula M. Alves, Nuno Carinhas, Jarka Glassey, Friedemann Hesse, Otto-Wilhelm Merten, Martina Micheletti, Thomas Noll, Rui Oliveira, Udo Reichl, Arne Staby, Ana P. Teixeira, Henry Weichert, and Carl-Fredrik Mandenius. "{How can measurement, monitoring, modeling and control advance cell culture in industrial biotechnology?}." {BIOTECHNOLOGY JOURNAL}. {7} (Submitted): {1522-1529}. Abstract
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Roldao, Antonio, Maria Candida M. Mellado, J. C. Lima, Manuel J. T. Carrondo, Paula M. Alves, and R. Oliveira. "{On the Effect of Thermodynamic Equilibrium on the Assembly Efficiency of Complex Multi-Layered Virus-Like Particles (VLP): the Case of Rotavirus VLP}." {PLOS COMPUTATIONAL BIOLOGY}. {8} (Submitted). Abstract
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Roldao, Antonio, Manuel J. T. Carrondo, Paula M. Alves, and R. Oliveira. "{Stochastic simulation of protein expression in the baculovirus/insect cells system}." {COMPUTERS & CHEMICAL ENGINEERING}. {32} (Submitted): {68-77}. Abstract
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Simon, Levente L., Hajnalka Pataki, Gyoergy Marosi, Fabian Meemken, Konrad Hungerbuehler, Alfons Baiker, Srinivas Tummala, Brian Glennon, Martin Kuentz, Gerry Steele, Herman J. M. Kramer, James W. Rydzak, Zengping Chen, Julian Morris, Francois Kjell, Ravendra Singh, Rafiqul Gani, Krist V. Gernaey, Marjatta Louhi-Kultanen, John O'Reilly, Niklas Sandler, Osmo Antikainen, Jouko Yliruusi, Patrick Frohberg, Joachim Ulrich, Richard D. Braatz, Tom Leyssens, Moritz von Stosch, Rui Oliveira, Reginald B. H. Tan, Huiquan Wu, Mansoor Khan, Des O'Grady, Anjan Pandey, Remko Westra, Emmanuel Delle-Case, Detlef Pape, Daniele Angelosante, Yannick Maret, Olivier Steiger, Miklos Lenner, Kaoutar Abbou-Oucherif, Zoltan K. Nagy, James D. Litster, Vamsi Krishna Kamaraju, and Min-Sen Chiu. "{Assessment of Recent Process Analytical Technology (PAT) Trends: A Multiauthor Review}." {ORGANIC PROCESS RESEARCH & DEVELOPMENT}. {19} (Submitted): {3-62}. Abstract
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Freitas, Filomena, Vitor D. Alves, Joana Pais, Nuno Costa, Cristina Oliveira, Luis Mafra, Loic Hilliou, Rui Oliveira, and Maria A. M. Reis. "{Characterization of an extracellular polysaccharide produced by a Pseudomonas strain grown on glycerol}." {BIORESOURCE TECHNOLOGY}. {100} (Submitted): {859-865}. Abstract
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Alves, Vitor D., Filomena Freitas, Cristiana A. V. Torres, Madalena Cruz, Rodolfo Marques, Christian Grandfils, M. P. Goncalves, Rui Oliveira, and Maria A. M. Reis. "{Rheological and morphological characterization of the culture broth during exopolysaccharide production by Enterobacter sp.}." {CARBOHYDRATE POLYMERS}. {81} (Submitted): {758-764}. Abstract
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Dias, Joao M. L., Adrian Oehmen, Luisa S. Serafim, Paulo C. Lemos, Maria A. M. Reis, and Rui Oliveira. "{Metabolic modelling of polyhydroxyalkanoate copolymers production by mixed microbial cultures}." {BMC SYSTEMS BIOLOGY}. {2} (Submitted). Abstract
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Roldao, Antonio, Rui Oliveira, Manuel J. T. Carrondo, and Paula M. Alves. "{Error assessment in recombinant baculovirus titration: Evaluation of different methods}." {JOURNAL OF VIROLOGICAL METHODS}. {159} (Submitted): {69-80}. Abstract
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Pardelha, Filipa, Maria G. E. Albuquerque, Maria A. M. Reis, Rui Oliveira, and Joao M. L. Dias. "{Dynamic metabolic modelling of volatile fatty acids conversion to polyhydroxyalkanoates by a mixed microbial culture}." {NEW BIOTECHNOLOGY}. {31} (Submitted): {335-344}. Abstract
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Castanheiro, JE, I. M. Fonseca, A. M. Ramos, R. Oliveira, and J. Vital. "{Hydration of alpha-pinene over molybdophosphoric acid immobilized in hydrophobically modified PVA membranes}." {CATALYSIS TODAY}. {104} (Submitted): {296-304}. Abstract
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von Stosch, Moritz, Steven Davy, Kjell Francois, Vytautas Galvanauskas, Jan-Martijn Hamelink, Andreas Luebbert, Martin Mayer, Rui Oliveira, Ronan O'Kennedy, Paul Rice, and Jarka Glassey. "{Hybrid modeling for quality by design and PAT - benefits and challenges of applications in biopharmaceutical industry}." {BIOTECHNOLOGY JOURNAL}. {9} (Submitted): {719-726}. Abstract
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Roldao, Antonio, Helena L. A. Vieira, Annie Charpilienne, Didier Poncet, Polly Roy, Manuel J. T. Carrondo, Paula M. Alves, and R. Oliveira. "{Modeling rotavirus-like particles production in a baculovirus expression vector system: Infection kinetics, baculovirus DNA replication, mRNA synthesis and protein production}." {JOURNAL OF BIOTECHNOLOGY}. {128} (Submitted): {875-894}. Abstract
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Ricardo, Ana R., Rui Oliveira, Svetlozar Velizarov, Maria A. M. Reis, and Joao G. Crespo. "{Hybrid modeling of counterion mass transfer in a membrane-supported biofilm reactor}." {BIOCHEMICAL ENGINEERING JOURNAL}. {62} (Submitted): {22-33}. Abstract
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Alves, Vitor D., Filomena Freitas, Nuno Costa, Monica Carvalheira, Rui Oliveira, Maria P. Goncalves, and Maria A. M. Reis. "{Effect of temperature on the dynamic and steady-shear rheology of a new microbial extracellular polysaccharide produced from glycerol byproduct}." {CARBOHYDRATE POLYMERS}. {79} (Submitted): {981-988}. Abstract
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Dias, Joao M. L., Filipa Pardelha, Mario Eusebio, Maria A. M. Reis, and Rui Oliveira. "{On-Line Adaptive Metabolic Flux Analysis: Application to PHB Production by Mixed Microbial Cultures}." {BIOTECHNOLOGY PROGRESS}. {25} (Submitted): {390-398}. Abstract
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Freitas, Filomena, Vitor D. Alves, Joana Pais, Monica Carvalheira, Nuno Costa, Rui Oliveira, and Maria A. M. Reis. "{Production of a new exopolysaccharide (EPS) by Pseudomonas oleovorans NRRL B-14682 grown on glycerol}." {PROCESS BIOCHEMISTRY}. {45} (Submitted): {297-305}. Abstract
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