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Submitted
Lozano, I, A., J. C. Oller, D. B. Jones, R. F. da Costa, M. T. N. do Varella, M. H. F. Bettega, F. Ferreira da Silva, P. Limao-Vieira, M. A. P. Lima, R. D. White, M. J. Brunger, F. Blanco, A. Munoz, and G. Garcia. "{Total electron scattering cross sections from para-benzoquinone in the energy range 1-200 eV}." {PHYSICAL CHEMISTRY CHEMICAL PHYSICS}. {20} (Submitted): {22368-22378}. Abstract
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Jones, D. B., R. F. da Costa, F. Kossoski, M. T. N. do Varella, M. H. F. Bettega, F. Ferreira da Silva, P. Limao-Vieira, G. Garcia, M. A. P. Lima, R. D. White, and M. J. Brunger. "{Electron-impact electronic-state excitation of para-benzoquinone}." {JOURNAL OF CHEMICAL PHYSICS}. {148} (Submitted). Abstract
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Simon, Levente L., Hajnalka Pataki, Gyoergy Marosi, Fabian Meemken, Konrad Hungerbuehler, Alfons Baiker, Srinivas Tummala, Brian Glennon, Martin Kuentz, Gerry Steele, Herman J. M. Kramer, James W. Rydzak, Zengping Chen, Julian Morris, Francois Kjell, Ravendra Singh, Rafiqul Gani, Krist V. Gernaey, Marjatta Louhi-Kultanen, John O'Reilly, Niklas Sandler, Osmo Antikainen, Jouko Yliruusi, Patrick Frohberg, Joachim Ulrich, Richard D. Braatz, Tom Leyssens, Moritz von Stosch, Rui Oliveira, Reginald B. H. Tan, Huiquan Wu, Mansoor Khan, Des O'Grady, Anjan Pandey, Remko Westra, Emmanuel Delle-Case, Detlef Pape, Daniele Angelosante, Yannick Maret, Olivier Steiger, Miklos Lenner, Kaoutar Abbou-Oucherif, Zoltan K. Nagy, James D. Litster, Vamsi Krishna Kamaraju, and Min-Sen Chiu. "{Assessment of Recent Process Analytical Technology (PAT) Trends: A Multiauthor Review}." {ORGANIC PROCESS RESEARCH & DEVELOPMENT}. {19} (Submitted): {3-62}. Abstract
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Meneses, G., C. Widmann, T. Cunha, A. Gil, F. Ferreira da Silva, M. J. Calhorda, and P. Limao-Vieira. "{Unravelling the dissociation pathways of acetic acid upon electron transfer in potassium collisions: experimental and theoretical studies}." {PHYSICAL CHEMISTRY CHEMICAL PHYSICS}. {19} (Submitted): {1083-1088}. Abstract
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Carrondo, Manuel J. T., Paula M. Alves, Nuno Carinhas, Jarka Glassey, Friedemann Hesse, Otto-Wilhelm Merten, Martina Micheletti, Thomas Noll, Rui Oliveira, Udo Reichl, Arne Staby, Ana P. Teixeira, Henry Weichert, and Carl-Fredrik Mandenius. "{How can measurement, monitoring, modeling and control advance cell culture in industrial biotechnology?}." {BIOTECHNOLOGY JOURNAL}. {7} (Submitted): {1522-1529}. Abstract
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Costa, F., L. Alvarez, A. I. Lozano, F. Blanco, J. C. Oller, A. Munoz, A. Souza Barbosa, M. H. F. Bettega, F. Ferreira da Silva, P. Limao-Vieira, R. D. White, M. J. Brunger, and G. Garcia. "{Experimental and theoretical analysis for total electron scattering cross sections of benzene}." {JOURNAL OF CHEMICAL PHYSICS}. {151} (Submitted). Abstract
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Zanarini, Simone, Nadia Garino, Jijeesh Ravi Nair, Carlotta Francia, Pawel Jerzy Wojcik, Luis Pereira, Elvira Fortunato, Rodrigo Martins, Silvia Bodoardo, and Nerino Penazzi. "{Contrast Enhancement in Polymeric Electrochromic Devices Encompassing Room Temperature Ionic Liquids}." {INTERNATIONAL JOURNAL OF ELECTROCHEMICAL SCIENCE}. {9} (Submitted): {1650-1662}. Abstract

{We report the preparation and spectro-electrochemical characterization of electrochromic devices (ECD) combining inkjet-printed WO3 as cathode and electro-deposited V2O5 as anode. ECD were prepared for the first time with an optimized formulation of gel polymer electrolyte based on Bisphenol A ethoxylate dimethacrylate and Poly(ethylene glycol) methyl ether methacrylate (BEMA/PEGMA) encompassing the Room Temperature Ionic Liquid (RTIL, 1-Ethyl-3-methylimidazolium bis(trifluoromethylsulfonyl)imide) as solvent. The UV-VIS spectrum of ECD was recorded at different potentials during Li+ insertion and de-insertion; additionally the Percent Trasmittance (T%) of ECD vs. time was investigated during repeated bleaching and coloring cycles allowing thus the estimation of switching times and device stability. Due to the lower ionic conductivity and the apparent superior solvent permeability within WO3 active layer, RTIL containing ECD showed slower switching times, but higher contrast with respect to the similar ones with EC/DEC as solvent. These results indicate that the ECD containing environment-friendly RTIL electrolytes are suitable for applications requiring high contrast, high safety and moderately fast switching times.}

da Silva, Filipe Ferreira, Philipp Waldburger, Stefan Jaksch, Andreas Mauracher, Stephan Denifl, Olof Echt, Tilmann D. Maerk, and Paul Scheier. "{On the Size of Ions Solvated in Helium Clusters}." {CHEMISTRY-A EUROPEAN JOURNAL}. {15} (Submitted): {7101-7108}. Abstract
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2025
Conca, Dario Valter, Fouzia Bano, Małgorzata Graul, Julius von Wirén, Lauriane Scherrer, Hudson Pace, Justas Svirelis, Konrad Thorsteinsson, Andreas Dahlin, and Marta Bally. "Variant-Specific Interactions at the Plasma Membrane: Heparan Sulfate’s Impact on SARS-CoV-2 Binding Kinetics." Analytical Chemistry (2025). AbstractWebsite
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Jiangzuo, Qigao, Joan Madurell-Malapeira, Xinhai Li, Darío Estraviz-López, Octávio Mateus, Agnès Testu, Shijie Li, Shiqi Wang, and Tao Deng. "Insights on the evolution and adaptation toward high-altitude and cold environments in the snow leopard lineage." Science Advances. 11 (2025): eadp5243. AbstractWebsite

How snow leopard gradually adapted to the extreme environments in Tibet remains unexplored due to the scanty fossil record in Tibet. Here, we recognize five valid outside-Tibet records of the snow leopard lineage. Our results suggest that the snow leopard dispersed out of the Tibetan Plateau multiple times during the Quaternary. The osteological anatomy of the modern snow leopard shows adaptation to the steep slope and, to a lesser extent, cold/high-altitude environment. Fossils and phylogeny suggest that the snow leopard experienced a gradual strengthening of such adaptation, especially since the Middle Pleistocene ( 0.8 million years). Species distribution modeling suggests that the locations of the fossil sites are not within most suitable area, and we argue that local landscape features are more influential factors than temperature and altitude alone. Our study underscores the importance of integrating morphology, fossil records, and species distribution modeling, to comprehensively understand the evolution, ecology, and inform conservation strategies for endangered species. Integrated morphology, fossil records, and SDM reveal the evolution and adaptation in the snow leopard lineage.

2024
Svedberg, Dennis, Rahel R. Winiger, Alexandra Berg, Himanshu Sharma, Christian Tellgren-Roth, Bettina A. Debrunner-Vossbrinck, Charles R. Vossbrinck, and Jonas Barandun. "Functional annotation of a divergent genome using sequence and structure-based similarity." BMC Genomics. 25 (2024). AbstractWebsite
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2023
López-Rojas, Víctor, Lars B. Clemmensen, Jesper Milàn, Oliver Wings, Nicole Klein, and Octávio Mateus. "A new phytosaur species (Archosauriformes) from the Upper Triassic of Jameson Land, central East Greenland." Journal of Vertebrate PaleontologyJournal of Vertebrate Paleontology (2023): e2181086. Abstracta_new_phytosaur_species_archosauriformes_from_the_upper_triassic_of_jameson_land_central_east_greenland.pdfWebsite

ABSTRACTHerein we describe phytosaurs from thin fluvial overbank sandstones of the Upper Triassic Malmros Klint Formation of the Fleming Fjord Group (central East Greenland). The new sample includes more than 150 disarticulated bones and teeth from small to large specimens belonging to at least four individuals. The fossils mostly consist of teeth and postcranial elements and permit the recognition of a new species of Mystriosuchus, M. alleroq, diagnosed by an L-shaped quadratojugal whose anterior suture trends anterodorsally and a tripartite degree of heterodonty. Humeral diaphyseal histology of one specimen reveals a fairly compact cortex that surrounds a cancellous medullary region followed by a remodeling zone containing scattered secondary osteons. Primary bone tissue is parallel-fibred with a moderate to low vascular density. The cortex is cyclically interrupted by distinct growth marks indicating a seasonal environment. A change in growth rate from moderate to low is documented within the outer cortex, indicating that at least this individual was close to somatic maturity. Mystriosuchus has formerly been known as an exclusively European taxon. The new findings support the European faunal influence in East Greenland during the Late Triassic inferred from other taxa such as temnospondyls and archosaurs. The mid-late Norian age of European Mystriosuchus suggests an additional age constraint for the vertebrate-bearing portion of the Malmros Klint Formation.

de Oliveira, Ivone Regina, Isabela dos Santos Gonçalves, Kennedy Wallace dos Santos, Maria Carmo Lança, Tânia Vieira, Jorge Carvalho Silva, Ibrahim Fatih Cengiz, Rui Luís Reis, Joaquim Miguel Oliveira, and João Paulo Miranda Ribeiro Borges. "Biocomposite Macrospheres Based on Strontium-Bioactive Glass for Application as Bone Fillers." ACS Materials Au. 3 (2023): 646-658. AbstractWebsite

Traditional bioactive glass powders are typically composed of irregular particles that can be packed into dense configurations presenting low interconnectivity, which can limit bone ingrowth. The use of novel biocomposite sphere formulations comprising bioactive factors as bone fillers are most advantageous, as it simultaneously allows for packing the particles in a 3-dimensional manner to achieve an adequate interconnected porosity, enhanced biological performance, and ultimately a superior new bone formation. In this work, we develop and characterize novel biocomposite macrospheres of Sr-bioactive glass using sodium alginate, polylactic acid (PLA), and chitosan (CH) as encapsulating materials for finding applications as bone fillers. The biocomposite macrospheres that were obtained using PLA have a larger size distribution and higher porosity and an interconnectivity of 99.7%. Loose apatite particles were observed on the surface of macrospheres prepared with alginate and CH by means of soaking into a simulated body fluid (SBF) for 7 days. A dense apatite layer was formed on the biocomposite macrospheres' surface produced with PLA, which served to protect PLA from degradation. In vitro investigations demonstrated that biocomposite macrospheres had minimal cytotoxic effects on a human osteosarcoma cell line (SaOS-2 cells). However, the accelerated degradation of PLA due to the degradation of bioactive glass may account for the observed decrease in SaOS-2 cells viability. Among the biocomposite macrospheres, those composed of PLA exhibited the most promising characteristics for their potential use as fillers in bone tissue repair applications.

Werneburg, I., Y. Pommery, M. Ruciński, B. Kästle, GJ Cohen, N. Natchev, O. Mateus, and GD Ferreira Functional morphology of the skull of Henodus chelyops (Placodontia). International Congress of Vertebrate Morphology Cairns - QLD - Australia 28 July - 1 August 2023. The Anatomical Record., 2023. Abstractwerneburg_et_al_2023_henodus_icvm_2023_abstracts_updated_8_14-1693344432.pdf

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Duval, Louis, Rοbert Loetzsch, Heinrich Beyer, Dariusz Banaś, Perla Dergham, Jan Glorius, Robert E. Grisenti, Mauro Guerra, Alexandre Gumberidze, Pierre-Michel Hillenbrand, Paweł Jagodziński, Emily Lamour, Yuri Litvinov, Jorge Machado, Gerhard Paulus, Nancy Paul, Nikolaos Petridis, Jose-Paulo Santos, Marius Scheidel, Ragandeep S. Sidhu, Uwe Spillmann, Sébastien Steydli, Karol Szary, Sergiy Trotsenko, Ingo Uschmann, Günther Weber, Thomas Stöhlker, Paul Indelicato, and Martino Trassinelli. "{X-ray spectroscopy of few-electron uranium ions for tests of QED}." Proceedings of FAIR next generation scientists - 7th Edition Workshop — PoS(FAIRness2022). Vol. 419. 2023. 012. Abstract
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2022
Amaro, P., A. Adamczak, Abdou M. Ahmed, L. Affolter, F. D. Amaro, P. Carvalho, T. L. Chen, L. M. P. Fernandes, M. Ferro, D. Goeldi, T. Graf, M. Guerra, T. W. Hänsch, C. A. O. Henriques, Y. C. Huang, P. Indelicato, O. Kara, K. Kirch, A. Knecht, F. Kottmann, Y. W. Liu, J. Machado, M. Marszalek, R. D. P. Mano, C. M. B. Monteiro, F. Nez, J. Nuber, A. Ouf, N. Paul, R. Pohl, E. Rapisarda, J. M. F. dos Santos, J. P. Santos, P. A. O. C. Silva, L. Sinkunaite, J. T. Shy, K. Schuhmann, S. Rajamohanan, A. Soter, L. Sustelo, D. Taqqu, L. B. Wang, F. Wauters, P. Yzombard, M. Zeyen, and A. Antognini. "Laser excitation of the 1s-hyperfine transition in muonic hydrogen." SciPost Physics. 13 (2022). Abstract

The CREMA collaboration is pursuing a measurement of the ground-state hyperfine splitting (HFS) in muonic hydrogen (μp) with 1 ppm accuracy by means of pulsed laser spectroscopy to determine the two-photon-exchange contribution with 2×10-4 relative accuracy. In the proposed experiment, the μp atom undergoes a laser excitation from the singlet hyperfine state to the triplet hyperfine state, then is quenched back to the singlet state by an inelastic collision with a H2 molecule. The resulting increase of kinetic energy after the collisional deexcitation is used as a signature of a successful laser transition between hyperfine states. In this paper, we calculate the combined probability that a μp atom initially in the singlet hyperfine state undergoes a laser excitation to the triplet state followed by a collisional-induced deexcitation back to the singlet state. This combined probability has been computed using the optical Bloch equations including the inelastic and elastic collisions. Omitting the decoherence effects caused by the laser bandwidth and collisions would overestimate the transition probability by more than a factor of two in the experimental conditions. Moreover, we also account for Doppler effects and provide the matrix element, the saturation fluence, the elastic and inelastic collision rates for the singlet and triplet states, and the resonance linewidth. This calculation thus quantifies one of the key unknowns of the HFS experiment, leading to a precise definition of the requirements for the laser system and to an optimization of the hydrogen gas target where μp is formed and the laser spectroscopy will occur.

Walker, R., D. Durão, D. Dias, I. Catarino, J. Pina, and R. Oliveira. "Preliminary Assessment of an Ultrasonic Level Sensor for the Calorimetric Measurement of AC Losses in Superconducting Devices." International Young Engineers Forum in Electrical and Computer Engineering. IEEE, 2022.
Zhou, H., W. - Y. Gao, H. C. Biscaia, X. - J. Wei, and J. - G. Dai. "Debonding analysis of FRP-to-concrete interfaces between two adjacent cracks in plated beams under temperature variations." Engineering Fracture Mechanics. 263 (2022). AbstractWebsite

Externally bonded fiber-reinforced polymer (FRP) composites have been widely used for the strengthening and repairing of reinforced concrete (RC) beams. Existing studies have denstrated that the full-range behavior and the associated debonding mechanism of the FRP-to-concrete interface between two adjacent cracks in the FRP-plated RC beam are different from those of the pull-off bonded joint. Moreover, the bond behavior between the FRP and the concrete may be affected by interfacial thermal stresses induced by the service temperature variations (i.e., the thermal loadings). Based on a fully reversible bilinear bond-slip model, this paper presents an analytical study to investigate the full-range deformation behavior of the FRP-to-concrete interface between two adjacent cracks under combined mechanical and thermal loadings. The analytical results have indicated that the thermal loadings may significantly influence the full-range deformation behavior and the axial stress distribution of the FRP plate, although the material properties of concrete, adhesive, and FRP are assumed to be not affected by the service temperature variations. A temperature increase leads to an increase in the ultimate load of the bond interface and vice versa. A finite element (FE) model with different considerations of the bondline damage is developed to verify the proposed analytical solution. The reliability of the proposed analytical solution is then validated by the comparisons between the analytical results and the corresponding predictions provided by the FE model. © 2022 Elsevier Ltd

Haque, Sirazul, Miguel Alexandre, Clemens Baretzky, Daniele Rossi, Francesca De Rossi, António T. Vicente, Francesca Brunetti, Hugo Águas, Rute A. S. Ferreira, Elvira Fortunato, Matthias Auf der Maur, Uli Würfel, Rodrigo Martins, and Manuel J. Mendes. "Photonic-Structured Perovskite Solar Cells: Detailed Optoelectronic Analysis." ACS Photonics. 9 (2022): 2408-2421. AbstractWebsite
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Boillos, J. M., D. Cortina-Gil, J. Benlliure, J. L. Rodr{\'ıguez-Sánchez, H. Alvarez-Pol, L. Atar, T. Aumann, V. V. Avdeichikov, S. Beceiro-Novo, D. Bemmerer, C. A. Bertulani, K. Boretzky, M. J. G. Borge, M. Caamano, C. Caesar, E. Casarejos, W. Catford, J. Cederkäll, M. Chartier, L. Chulkov, E. Cravo, R. N. P. Crespo, I. Dillmann, Diaz P. Fernandez, Z. Elekes, J. Enders, O. Ershova, A. Estrade, F. Farinon, L. M. Fraile, M. Freer, Galaviz D. Redondo, H. Geissel, R. Gernhäuser, P. Golubev, K. Göbel, J. Hagdahl, T. Heftrich, M. Heil, M. Heine, A. Heinz, A. Henriques, M. Holl, A. Hufnagel, A. Ignatov, H. T. Johansson, B. Jonson, J. Kahlbow, N. Kalantar-Nayestanaki, R. Kanungo, A. Kelic-Heil, A. Knyazev, T. Kröll, N. Kurz, M. Labiche, C. Langer, T. Le Bleis, R. Lemmon, S. Lindberg, J. F. D. C. Machado, J. Marganiec, A. Movsesyan, E. Nacher, M. A. Najafi, T. Nilsson, C. Nociforo, V. Panin, S. Paschalis, A. Perea, M. Petri, S. Pietri, R. Plag, R. Reifarth, G. Ribeiro, C. Rigollet, D. M. Rossi, M. Röder, D. Savran, H. Scheit, H. Simon, O. Sorlin, I. J. Syndikus, J. T. Taylor, O. Tengblad, R. Thies, Y. Togano, M. Vandebrouck, P. J. F. Velho, V. Volkov, A. Wagner, F. Wamers, H. Weick, C. Wheldon, G. L. Wilson, J. S. Winfield, P. Woods, D. Yakorev, M. Zhukov, A. Zilges, and K. Zuber. "{Isotopic cross sections of fragmentation residues produced by light projectiles on carbon near $400A$ MeV}." (2022): 1-13. Abstract

Phys. Rev. C 105, 014611 (2022). doi:10.1103/PhysRevC.105.014611

2021
Baumann, Manuel, Jen Peters, H. Ersoy, Marcel Weil, Guy Fournier, António Brandão Moniz, and Nelson C. Martins. "Decision making support for the selection of stationary batteries." Energy Transition and Sustainability Conference (APEEN 2021). online: CENSE, 2021.
Krauth, Julian J., Karsten Schuhmann, Marwan Abdou Ahmed, Fernando D. Amaro, Pedro Amaro, François Biraben, Tzu-Ling Chen, Daniel S. Covita, Andreas J. Dax, Marc Diepold, Luis M. P. Fernandes, Beatrice Franke, Sandrine Galtier, Andrea L. Gouvea, Johannes Götzfried, Thomas Graf, Theodor W. Hänsch, Jens Hartmann, Malte Hildebrandt, Paul Indelicato, Lucile Julien, Klaus Kirch, Andreas Knecht, Yi-Wei Liu, Jorge Machado, Cristina M. B. Monteiro, Françoise Mulhauser, Boris Naar, Tobias Nebel, François Nez, Joaquim M. F. dos Santos, José Paulo Santos, Csilla I. Szabo, David Taqqu, João F. C. A. Veloso, Jan Vogelsang, Andreas Voss, Birgit Weichelt, Randolf Pohl, Aldo Antognini, and Franz Kottmann. "Measuring the $\upalpha$-particle charge radius with muonic helium-4 ions." Nature. 589 (2021): 527-531. AbstractWebsite
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Krauth, Julian J., Karsten Schuhmann, Marwan Abdou Ahmed, Fernando D. Amaro, Pedro Amaro, Fran{\c c}ois Biraben, Tzu-Ling Chen, Daniel S. Covita, Andreas J. Dax, Marc Diepold, Luis M. P. Fernandes, Beatrice Franke, Sandrine Galtier, Andrea L. Gouvea, Johannes Götzfried, Thomas Graf, Theodor W. Hänsch, Jens Hartmann, Malte Hildebrandt, Paul Indelicato, Lucile Julien, Klaus Kirch, Andreas Knecht, Yi-Wei Liu, Jorge Machado, Cristina M. B. Monteiro, Fran{\c c}oise Mulhauser, Boris Naar, Tobias Nebel, Fran{\c c}ois Nez, Joaquim M. F. dos Santos, José Paulo Santos, Csilla I. Szabo, David Taqqu, João F. C. A. Veloso, Jan Vogelsang, Andreas Voss, Birgit Weichelt, Randolf Pohl, Aldo Antognini, and Franz Kottmann. "{Measuring the $\alpha$-particle charge radius with muonic helium-4 ions}." Nature. 589 (2021): 527-531. AbstractWebsite

The energy levels of hydrogen-like atomic systems can be calculated with great precision. Starting from their quantum mechanical solution, they have been refined over the years to include the electron spin, the relativistic and quantum field effects, and tiny energy shifts related to the complex structure of the nucleus. These energy shifts caused by the nuclear structure are vastly magnified in hydrogen-like systems formed by a negative muon and a nucleus, so spectroscopy of these muonic ions can be used to investigate the nuclear structure with high precision. Here we present the measurement of two 2S–2P transitions in the muonic helium-4 ion that yields a precise determination of the root-mean-square charge radius of the $\alpha$ particle of 1.67824(83) femtometres. This determination from atomic spectroscopy is in excellent agreement with the value from electron scattering1, but a factor of 4.8 more precise, providing a benchmark for few-nucleon theories, lattice quantum chromodynamics and electron scattering. This agreement also constrains several beyond-standard-model theories proposed to explain the proton-radius puzzle2–5, in line with recent determinations of the proton charge radius6–9, and establishes spectroscopy of light muonic atoms and ions as a precise tool for studies of nuclear properties. The 2S–2P transitions in muonic helium-4 ions are measured using laser spectroscopy and used to obtain an $\alpha$-particle charge-radius value five times more precise than that from electron scattering.

Wain, Alison, Diogo Castro, {Maria Fernanda} Rollo, Frederico Nogueira, Gon{\c c}alo Santos, {Maria Gra{\c da c}a} Filipe, Isabel Tissot, {Jorge Miguel} Sampaio, {José Paulo} Santos, Manuel Lemos, Marta Manso, Matthias Tissot, Mauro Guerra, Miles Oglethorpe, Pedro Amaro, Pedro Pedroso, Rui Silva, Sofia Pessanha, and {Tiago A. N. } Silva Cultura Material, Cultura Científica: Património Industrial para o Futuro. Portugal: Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2021. Abstract

Material, Culture, Scientific Culture: Industrial Heritage for the Future