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A
Pinheiro, C., M. M. Chaves, and C. P. Ricardo. "Alterations in carbon and nitrogen metabolism induced by water deficit in the stems and leaves of Lupinus albus L." Journal of Experimental Botany. 52 (2001): 1063-1070. AbstractWebsite
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Pinheiro, C., M. M. Chaves, and C. P. Ricardo. "Alterations in carbon and nitrogen metabolism induced by water deficit in the stems and leaves of Lupinus albus L." Journal of Experimental Botany. 52 (2001): 1063-1070. AbstractWebsite
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Antonio, Carla, Carla Pinheiro, Maria Manuela Chaves, Candido Pinto Ricardo, Maria Fernanda Ortuno, and Jane Thomas-Oates. "Analysis of carbohydrates in Lupinus albus stems on imposition of water deficit, using porous graphitic carbon liquid chromatography-electrospray ionization mass spectrometry." Journal of Chromatography A. 1187 (2008): 111-118. AbstractWebsite
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Antonio, Carla, Carla Pinheiro, Maria Manuela Chaves, Candido Pinto Ricardo, Maria Fernanda Ortuno, and Jane Thomas-Oates. "Analysis of carbohydrates in Lupinus albus stems on imposition of water deficit, using porous graphitic carbon liquid chromatography-electrospray ionization mass spectrometry." Journal of Chromatography A. 1187 (2008): 111-118. AbstractWebsite
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Chaves, M. M., J. M. Costa, O. Zarrouk, C. Pinheiro, C. M. Lopes, and JS Pereira. "Controlling stomatal aperture in semi-arid regions-The dilemma of saving water or being cool?" Plant Science. 251 (2016): 54-64. AbstractWebsite
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Pinheiro, C., MHC de Carvalho, D. Bartels, CP Ricarddo, and M. M. Chaves. "Dehydrins in Lupinus albus: pattern of protein accumulation in response to drought." FUNCTIONAL PLANT BIOLOGY. 35 (2008): 85-91. Abstract
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Pinheiro, C., MHC de Carvalho, D. Bartels, CP Ricarddo, and M. M. Chaves. "Dehydrins in Lupinus albus: pattern of protein accumulation in response to drought." FUNCTIONAL PLANT BIOLOGY. 35 (2008): 85-91. Abstract
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Guerra-Guimaraes, Leonor, Ana Vieira, Ines Chaves, Carla Pinheiro, Vagner Queiroz, Jenny Renaut, and Candido P. Ricardo. "Effect of greenhouse conditions on the leaf apoplastic proteome of Coffea arabica plants." Journal of proteomics. 104 (2014): 128-39. AbstractWebsite
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Guerra-Guimaraes, Leonor, Ana Vieira, Ines Chaves, Carla Pinheiro, Vagner Queiroz, Jenny Renaut, and Candido P. Ricardo. "Effect of greenhouse conditions on the leaf apoplastic proteome of Coffea arabica plants." Journal of proteomics. 104 (2014): 128-39. AbstractWebsite
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Jardak-Jamoussi, Rahma, Donia Abdelwahed, Nejia Zoghlami, Asma Ben Salem, Olfa Zarrouk, Ahmed Mliki, Manuela Chaves, Abdelwahed Ghorbel, and Carla Pinheiro. "Grapevine RD22a constitutive expression in tobacco enhances stomatal adjustment and confers drought tolerance." Theoretical and Experimental Plant Physiology. 28 (2016): 395-413. AbstractWebsite
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Chaves, M. M., JS Pereira, J. Maroco, ML Rodrigues, CPP Ricardo, ML Osorio, I. Carvalho, T. Faria, and C. Pinheiro. "How plants cope with water stress in the field. Photosynthesis and growth." Annals of Botany. 89 (2002): 907-916. Abstract
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Chaves, M. M., JS Pereira, J. Maroco, ML Rodrigues, CPP Ricardo, ML Osorio, I. Carvalho, T. Faria, and C. Pinheiro. "How plants cope with water stress in the field. Photosynthesis and growth." Annals of Botany. 89 (2002): 907-916. Abstract
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Ribeiro, IC, C. C. Leclercq, N. Simoes, A. Toureiro, I. Duarte, J. B. Freire, M. M. Chaves, J. Renaut, and C. Pinheiro. "Identification of chickpea seed proteins resistant to simulated in vitro human digestion." Journal of Proteomics. 169 (2017): 143-152. AbstractWebsite
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Zarrouk, Olfa, Rita Francisco, Marta Pinto-Marijuan, Ricard Brossa, Raquen Raissa Santos, Carla Pinheiro, Joaquim Miguel Costa, Carlos Lopes, and Maria Manuela Chaves. "Impact of irrigation regime on berry development and flavonoids composition in Aragonez (Syn. Tempranillo) grapevine." Agricultural Water Management. 114 (2012). AbstractWebsite
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Zarrouk, Olfa, Rita Francisco, Marta Pinto-Marijuan, Ricard Brossa, Raquen Raissa Santos, Carla Pinheiro, Joaquim Miguel Costa, Carlos Lopes, and Maria Manuela Chaves. "Impact of irrigation regime on berry development and flavonoids composition in Aragonez (Syn. Tempranillo) grapevine." Agricultural Water Management. 114 (2012). AbstractWebsite
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Pinheiro, Carla, Carla Antonio, Maria Fernanda Ortuno, Petre I. Dobrev, Wolfram Hartung, Jane Thomas-Oates, Candido Pinto Ricardo, Radomira Vankova, Manuela M. Chaves, and Julie C. Wilson. "Initial water deficit effects on Lupinus albus photosynthetic performance, carbon metabolism, and hormonal balance: metabolic reorganization prior to early stress responses." Journal of Experimental Botany. 62 (2011): 4965-4974. AbstractWebsite

The early (2-4 d) effects of slowly imposed soil water deficit on Lupinus albus photosynthetic performance, carbon metabolism, and hormonal balance in different organs (leaf blade, stem stele, stem cortex, and root) were evaluated on 23-d-old plants (growth chamber assay). Our work shows that several metabolic adjustments occurred prior to alteration of the plant water status, implying that water deficit is perceived before the change in plant water status. The slow, progressive decline in soil water content started to be visible 3 d after withholding water (3 DAW). The earliest plant changes were associated with organ-specific metabolic responses (particularly in the leaves) and with leaf conductance and only later with plant water status and photosynthetic rate (4 DAW) or photosynthetic capacity (according to the Farquhar model; 6 DAW). Principal component analysis (PCA) of the physiological parameters, the carbohydrate and the hormone levels and their relative values, as well as leaf water-soluble metabolites full scan data (LC-MS/MS), showed separation of the different sampling dates. At 6 DAW classically described stress responses are observed, with plant water status, ABA level, and root hormonal balance contributing to the separation of these samples. Discrimination of earlier stress stages (3 and 4 DAW) is only achieved when the relative levels of indole-3-acetic acid (IAA), cytokinins (Cks), and carbon metabolism (glucose, sucrose, raffinose, and starch levels) are taken into account. Our working hypothesis is that, in addition to single responses (e.g. ABA increase), the combined alterations in hormone and carbohydrate levels play an important role in the stress response mechanism. Response to more advanced stress appears to be associated with a combination of cumulative changes, occurring in several plant organs. The carbohydrate and hormonal balance in the leaf (IAA to bioactive-Cks; soluble sugars to IAA and starch to IAA; relative abundances of the different soluble sugars) flag the initial responses to the slight decrease in soil water availability (10-15% decrease). Further alterations in sucrose to ABA and in raffinose to ABA relative values (in all organs) indicate that soil water availability continues to decrease. Such alterations when associated with changes in the root hormone balance indicate that the stress response is initiated. It is concluded that metabolic balance (e.g. IAA/bioactive Cks, carbohydrates/IAA, sucrose/ABA, raffinose/ABA, ABA/IAA) is relevant in triggering adjustment mechanisms.

Pinheiro, Carla, Carla Antonio, Maria Fernanda Ortuno, Petre I. Dobrev, Wolfram Hartung, Jane Thomas-Oates, Candido Pinto Ricardo, Radomira Vankova, Manuela M. Chaves, and Julie C. Wilson. "Initial water deficit effects on Lupinus albus photosynthetic performance, carbon metabolism, and hormonal balance: metabolic reorganization prior to early stress responses." Journal of Experimental Botany. 62 (2011): 4965-4974. AbstractWebsite
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Regalado, AP, C. Pinheiro, S. Vidal, I. Chaves, CPP Ricardo, and C. Rodrigues-Pousada. "The Lupinus albus class-III chitinase gene, IF3, is constitutively expressed in vegetative organs and developing seeds." Planta. 210 (2000): 543-550. Abstract
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Regalado, AP, C. Pinheiro, S. Vidal, I. Chaves, CPP Ricardo, and C. Rodrigues-Pousada. "The Lupinus albus class-III chitinase gene, IF3, is constitutively expressed in vegetative organs and developing seeds." Planta. 210 (2000): 543-550. Abstract
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M
Alves, M., P. Chicau, H. Matias, J. Passarinho, C. Pinheiro, and C. P. Ricardo. "Metabolic analysis revealed altered amino acid profiles in Lupinus albus organs as a result of boron deficiency." Physiologia Plantarum. 142 (2011): 224-232. AbstractWebsite

We analysed the changes in the metabolites of Lupinus albus organs (leaf-blades, petioles, apexes, hypocotyls and roots) as a consequence of B deficiency. The deficiency did not affect malate concentration and induced only minor changes in the sugar content, suggesting that the carbohydrate metabolism is little affected by the deficiency. Contrarily, marked changes in the content of free amino acids were observed, with some specific variations associated with the different organs. These changes indicate that various aspects of metabolism implicated in the amino acid accumulation were affected by B deficiency. Most of the detected changes appear to have implications with some stress responses or signalling processes. Asparagine and proline that increase in many stresses also accumulated in petioles, apexes and hypocotyls. Accumulation of gamma-aminobutyric acid shunt amino acids, indicative of production of reactive oxygen species, occurs in the same three organs and also the roots. The increase in the branched-chain amino acids, observed in all organs, suggests the involvement of B with the cytoskeleton, whereas glycine decrease in leaf-blades and active growing organs (apexes and roots) could be associated with the proposed role of this amino acids in plant signalling in processes that might be associated with the decreased growth rates observed in B deficiency. Despite the admitted importance of free amino acids in plant metabolism, the available information on this matter is scarce. So our results bring new information concerning the effects of B deficiency in the metabolism of the several L. albus organs.

Alves, M., P. Chicau, H. Matias, J. Passarinho, C. Pinheiro, and C. P. Ricardo. "Metabolic analysis revealed altered amino acid profiles in Lupinus albus organs as a result of boron deficiency." Physiologia Plantarum. 142 (2011): 224-232. AbstractWebsite
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JM, Costa, Marques Silva da J, Pinheiro C, Barón M, Mylona P, Centritto M, Haworth M, and Turkan Oliveira MM. I. Loreto F, Uzilday B. "Opportunities and limitations of crop phenotyping in Southern European countries." Frontiers in Plant Science 10.3389/fpls.2019.01125 (2019): 1125.
Jardak-Jamoussi, Rahma, Olfa Zarrouk, Asma Ben Salem, Nejia Zoghlami, Samiha Mejri, Samia Gandoura, Bilel Khiari, Ahmed Mliki, Manuela Chaves, Abdelwahed Ghorbel, and Carla Pinheiro. "Overexpressing Vitis vinzfera YSK2 dehydrin in tobacco improves plant performance." Agricultural Water Management. 164 (2016): 176-189. AbstractWebsite
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Pinheiro, C., and M. M. Chaves. "Photosynthesis and drought: can we make metabolic connections from available data?" Journal of Experimental Botany. 62 (2011): 869-882. AbstractWebsite

Photosynthesis is one of the key processes to be affected by water deficits, via decreased CO2 diffusion to the chloroplast and metabolic constraints. The relative impact of those limitations varies with the intensity of the stress, the occurrence (or not) of superimposed stresses, and the species we are dealing with. Total plant carbon uptake is further reduced due to the concomitant or even earlier inhibition of growth. Leaf carbohydrate status, altered directly by water deficits or indirectly (via decreased growth), acts as a metabolic signal although its role is not totally clear. Other relevant signals acting under water deficits comprise: abscisic acid (ABA), with an impact on stomatal aperture and the regulation at the transcription level of a large number of genes related to plant stress response; other hormones that act either concurrently (brassinosteroids, jasmonates, and salycilic acid) or antagonistically (auxin, cytokinin, or ethylene) with ABA; and redox control of the energy balance of photosynthetic cells deprived of CO2 by stomatal closure. In an attempt to systematize current knowledge on the complex network of interactions and regulation of photosynthesis in plants subjected to water deficits, a meta-analysis has been performed covering > 450 papers published in the last 15 years. This analysis shows the interplay of sugars, reactive oxygen species (ROS), and hormones with photosynthetic responses to drought, involving many metabolic events. However, more significantly it highlights (i) how fragmented and often non-comparable the results are and (ii) how hard it is to relate molecular events to plant physiological status, namely photosynthetic activity, and to stress intensity. Indeed, the same data set usually does not integrate these different levels of analysis. Considering these limitations, it was hard to find a general trend, particularly concerning molecular responses to drought, with the exception of the genes ABI1 and ABI3. These genes, irrespective of the stress type (acute versus chronic) and intensity, show a similar response to water shortage in the two plant systems analysed (Arabidopsis and barley). Both are associated with ABA-mediated metabolic responses to stress and the regulation of stomatal aperture. Under drought, ABI1 transcription is up-regulated while ABI3 is usually down-regulated. Recently ABI3 has been hypothesized to be essential for successful drought recovery.

Pinheiro, C., and M. M. Chaves. "Photosynthesis and drought: can we make metabolic connections from available data?" Journal of Experimental Botany. 62 (2011): 869-882. AbstractWebsite
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