@article {5321, title = {Rational reprogramming of the R2 subunit of Escherichia coli ribonucleotide reductase into a self-hydroxylating monooxygenase}, journal = {Journal of the American Chemical Society}, volume = {123}, number = {29}, year = {2001}, note = {

Times Cited: 61 Baldwin, J Voegtli, WC Khidekel, N Moenne-Loccoz, P Krebs, C Pereira, AS Ley, BA Huynh, BH Loehr, TM Riggs-Gelasco, PJ Rosenzweig, AC Bollinger, JM

}, pages = {7017-7030}, type = {Journal Article}, abstract = {

The outcome of O-2 activation at the diiron(II) cluster in the R2 subunit of Escherichia coli (class I) ribonucleotide reductase has been rationally altered from the normal tyrosyl radical (Y122)(1) production to self-hydroxylation of a phenylalanine side-chain by two amino acid substitutions that leave intact the (histidine)(2)-(carboxylate)(4) ligand set characteristic of the diiron-carboxylate family. Iron ligand Asp (D) 84 was replaced with Glu (E), the amino acid found in the cognate position of the structurally similar diiron-carboxylate protein, methane monooxygenase hydroxylase (MMOH). We previously showed that this substitution allows accumulation of a mu -1,2-peroxodiiron(III) intermediate,(2 3) which does not accumulate in the wild-type (wt) protein and is probably a structural homologue of intermediate P (H-peroxo) in O-2 activation by MMOH.(4) In addition, the near-surface residue Trp (W) 48 was replaced with Phe (F), blocking transfer of the "extra" electron that occurs in wt R2 during formation of the formally Fe(LII)Fe(IV) cluster X.(5-7) Decay of the mu1,2-peroxodiiron(III) complex in R2-W38F/D84E gives an initial brown product, which contains very little YI22(.) and which converts very slowly (t(1/2) similar to 7 h) upon incubation at 0 degreesC to an intensely purple final product. X-ray crystallographic analysis of the purple product indicates that F208 has undergone epsilon -hydroxylation and the resulting phenol has shifted significantly to become st ligand to Fe2 of the diiron cluster. Resonance Raman (RR) spectra of the purple product generated with O-16(2) or O-18(2) show appropriate isotopic sensitivity in bands assigned to O-phenyl and Fe-O-phenyl vibrational modes, confirming that the oxygen of the Fe(III)-phenolate species is derived from Or. Chemical analysis, experiments involving interception of the hydroxylating intermediate with exogenous reductant, and Mossbauer and EXAFS characterization of the brown and purple species establish that F208 hydroxylation occurs during decay of the peroxo complex and formation of the initial brown product. The slow transition to the purple Fe(LII)-phenolate species is ascribed to a ligand rearrangement in which mu -O2- is lost and the F208-derived phenolate coordinates. The reprogramming to F208 monooxygenase requires both amino acid substitutions, as very little epsilon -hydroxyphenylalanine is formed and pathways leading to Y122(.) formation predominate in both R2-D84E and R2-W48F(2-7).

}, issn = {0002-7863}, doi = {10.1021/ja002114g}, url = {://WOS:000169978900007}, author = {Baldwin, J. and Voegtli, W. C. and Khidekel, N. and Moenne-Loccoz, P. and Krebs, C and Pereira, AS and Ley, B. A. and HUYNH, BH and Loehr, T. M. and Riggs-Gelasco, P. J. and Rosenzweig, A. C. and Bollinger, J. M.} } @article {5365, title = {Redox potential measurements of the Mycobacterium tuberculosis heme protein KatG and the isoniazid-resistant enzyme KatG(S315T): Insights into isoniazid activation}, journal = {Biochemistry}, volume = {39}, number = {37}, year = {2000}, note = {

Times Cited: 28 Wengenack, NL Lopes, H Kennedy, MJ Tavares, P Pereira, AS Moura, I Moura, JJG Rusnak, F

}, pages = {11508-11513}, type = {Journal Article}, abstract = {

Mycobacterium tuberculosis KatG is a multifunctional heme enzyme responsible for activation of the antibiotic isoniazid. A KatG(S315T) point mutation is found in \>50\% of isoniazid-resistant clinical isolates. Since isoniazid activation is thought to involve an oxidation reaction, the redox potential of KatG was determined using cyclic voltammetry, square wave voltammetry, and spectroelectrochemical titrations. Isoniazid activation may proceed via a cytochrome P450-like mechanism. Therefore, the possibility that substrate binding by KatG leads to an increase in the heme redox potential and the possibility that KatG(S315T) confers isoniazid resistance by altering the redox potential were examined. Effects of the heme spin state on the reduction potentials of KatG and KatG(S315T) were also determined. Assessment of the Fe3+/Fe2+ couple gave a midpoint potential of ca. -50 mV for both KatG and KatG(S315T). In contrast to cytochrome P450s, addition of substrate had no significant effect on either the KatG or KatG(S315T) redox potential. Conversion of the heme to a low-spin configuration resulted in a -150 to -200 mV shift of the KatG and KatG(S315T) redox potentials. These results suggest that isoniazid resistance conferred by KatG(S315T) is not mediated through changes in the heme redox potential. The redox potentials of isoniazid were also determined using cyclic and square wave voltammetry, and the results provide evidence that the ferric KatG and KatG(S315T) midpoint potentials are too low to promote isoniazid oxidation without formation of a high-valent enzyme intermediate such as compounds I and IT or oxyferrous KatG.

}, issn = {0006-2960}, doi = {10.1021/bi001239v}, url = {://WOS:000089436600036}, author = {Wengenack, NL and Lopes, H and Kennedy, MJ and Tavares, P. and Pereira, AS and Moura, I and Moura, JJG and Rusnak, F} } @article {5328, title = {Reactions of nitric oxide with the reduced non-heme diiron center of the soluble methane monooxygenase hydroxylase}, journal = {Biochemistry}, volume = {38}, number = {14}, year = {1999}, note = {

Times Cited: 33 Coufal, DE Tavares, P Pereira, AS Hyunh, BH Lippard, SJ

}, pages = {4504-4513}, type = {Journal Article}, abstract = {

The soluble methane monooxygenase system from Methylococcus capsulatus (Bath) catalyzes the oxidation of methane to methanol and water utilizing dioxygen at a non-heme, carboxylate-bridged diiron center housed in the hydroxylase (H) component. To probe the nature of the reductive activation of dioxygen in this system, reactions of an analogous molecule, nitric oxide, with the diiron(II) form of the enzyme (H-red) Were investigated by both continuous and discontinuous kinetics methodologies using optical, EPR, and Mossbauer spectroscopy. Reaction of NO with H-red affords a dinitrosyl species, designated H-dinitrosyl, with optical spectra (lambda(max) = 450 and 620 nm) and Mossbauer parameters (delta = 0.72 mm/s, Delta E-Q = 1.55 mm/s) similar to those of synthetic dinitrosyl analogues and of the dinitrosyl adduct of the reduced ribonucleotide reductase R2 (RNR-R2) protein. The H-dinitrosyl species models features of the H-peroxo intermediate formed in the analogous dioxygen reaction. In the presence of protein B, H-dinitrosyl builds up with approximately the same rate constant as H-peroxo (similar to 26 s(-1)) at 4 degrees C. In the absence of protein B, the kinetics of H-dinitrosyl formation were best fit with a biphasic A {\textendash}\> B {\textendash}\> C model, indicating the presence of an intermediate species between H-red and H-dinitrosyl. This result contrasts with the reaction of H-red with dioxygen, in which the H-peroxo intermediate forms in measurable quantities only in the presence of protein B. These findings suggest that protein B may alter the positioning but not the availability of coordination sites on iron for exogenous ligand binding and reactivity.

}, issn = {0006-2960}, doi = {10.1021/bi9823378}, url = {://WOS:000079834100032}, author = {Coufal, DE and Tavares, P. and Pereira, AS and Hyunh, BH and Lippard, SJ} } @article {5366, title = {Redox potential of the heme protein KatG from Mycobacterium tuberculosis}, journal = {Journal of Inorganic Biochemistry}, volume = {74}, number = {1-4}, year = {1999}, note = {

Times Cited: 0 Wengenack, N Lopes, H Kennedy, M Tavares, P Pereira, AS Moura, I Moura, JJG Rusnak, F

}, pages = {336-336}, type = {Journal Article}, abstract = {n/a}, issn = {0162-0134}, url = {://WOS:000081157700625}, author = {Wengenack, N and Lopes, H and Kennedy, M and Tavares, P. and Pereira, AS and Moura, I and Moura, JJG and Rusnak, F} } @article {5351, title = {Rapid and parallel formation of Fe3+ multimers, including a trimer, during H-type subunit ferritin mineralization}, journal = {Biochemistry}, volume = {36}, number = {25}, year = {1997}, note = {

Times Cited: 31 Pereira, AS Tavares, P Lloyd, SG Danger, D Edmondson, DE Theil, EC Huynh, BH

}, pages = {7917-7927}, type = {Journal Article}, abstract = {

Conversion of Fe ions in solution to the solid phase in ferritin concentrates iron required for cell function. The rate of the Fe phase transition in ferritin is tissue specific and reflects the differential expression of two classes of ferritin subunits (H and L). Early stages of mineralization were probed by rapid freeze-quench Mossbauer, at strong fields (up to 8 T), and EPR spectroscopy in an H-type subunit, recombinant frog ferritin; small numbers of Fe (36 moles/mol of protein) were used to increase Fe3+ in mineral precursor forms, At 25 ms, four Fe3+-oxy species (three Fe dimers and one Fe trimer) were identified, These Fe3+-oxy species were found to form at similar rates and decay subsequently to a distinctive superparamagentic species designated the {\textquoteright}{\textquoteright}young core.{\textquoteright}{\textquoteright} The rate of oxidation of Fe2+ (1026 s(-1)) corresponded well to the formation constant for the Fe3+- tyrosinate complex (920 s(-1)) observed previously [Waldo, G. S., \& Theil, E. C. (1993) Biochemistry 32, 13261] and, coupled with EPR data, indicates that several or possibly all of the Fe3+-oxy species involve tyrosine. The results, combined with previous Mossbauer studies of Y30F human H-type ferritin which showed decreases in several Fe3+ intermediates and stabilization of Fe2+ [Bauminger, E. R., et al. (1993) Biochem, J. 296, 709], emphasize the involvement of tyrosyl residues in the mineralization of H-type ferritins. The subsequent decay of these multiple Fe3+-oxy species to the superparamagnetic mineral suggests that Fe3+ species in different environments may be translocated as intact units from the protein shell into the ferritin cavity where the conversion to a solid mineral occurs.

}, issn = {0006-2960}, doi = {10.1021/bi970348f}, url = {://WOS:A1997XG90100035}, author = {Pereira, AS and Tavares, P. and Lloyd, S. G. and Danger, D and Edmondson, DE and Theil, E. C. and HUYNH, BH} }