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Guerra, M., J. M. Sampaio, F. Parente, P. Indelicato, P. Hönicke, M. Muller, B. Beckhoff, J. P. Marques, and J. P. Santos. "{Theoretical and experimental determination of $K$- and $L$-shell x-ray relaxation parameters in Ni}." Phys. Rev. A 97 (2018): 042501. Abstract
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de J Mangueze, Adilson V., Maria F. G. Pessoa, Maria J. Silva, Alexis Ndayiragije, Hilário E. Magaia, Viriato S. I. Cossa, Fernando H. Reboredo, Maria L. Carvalho, José P. Santos, Mauro Guerra, ANA I. RIBEIRO-BARROS, Fernando C. Lidon, and José C. Ramalho. "{Simultaneous Zinc and selenium biofortification in rice. Accumulation, localization and implications on the overall mineral content of the flour}." Journal of Cereal Science 82 (2018): 34-41. Abstract
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Monteiro, C. M. B., F. D. Amaro, M. S. Sousa, M. Abdou-Ahmed, P. Amaro, F. Biraben, T. Chen, D. S. Covita, A. J. Dax, M. Diepold, L. M. P. Fernandes, B. Franke, S. Galtier, A. L. Gouvêa, J. Götzfried, T. Graf, T. W. Hansch, M. Hildebrandt, P. Indelicato, L. Julien, K. Kirch, A. Knecht, F. Kottmann, J. J. Krauth, Y. Liu, J. Machado, F. Mulhauser, B. Naar, T. Nebel, F. Nez, R. Pohl, J. P. Santos, J. M. F. dos Santos, K. Schuhmann, C. I. Szabo, D. Taqqu, J. F. C. A. Veloso, and A. Antognini. "{On the double peak structure of avalanche photodiode response to monoenergetic x-rays at various temperatures and bias voltages}." J. Inst. 13 (2018): C01033. Abstract
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Machado, J., C. I. Szabo, J. P. Santos, P. Amaro, M. Guerra, A. Gumberidze, Guojie Bian, J. M. Isac, and P. Indelicato. "{High-precision measurements of $n=2\rightarrow n=1$ transition energies and level widths in He- and Be-like argon ions}." Phys. Rev. 97 (2018): 032517. Abstract
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Ménesguen, Y., M. - C. Lépy, J. M. Sampaio, J. P. Marques, F. Parente, M. Guerra, P. Indelicato, and J. P. Santos. "{Experimental and theoretical determination of the L-fluorescence yields of bismuth}." Metrologia 55 (2018): 621-630. Abstract
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Ménesguen, Y., M. - C. Lépy, J. M. Sampaio, J. P. Marques, F. Parente, M. Guerra, P. Indelicato, J. P. Santos, P. Hönicke, and B. Beckhoff. "{A combined experimental and theoretical approach to determine X-ray atomic fundamental quantities of tin}." X-Ray Spectrom. 47 (2018): 341-351. Abstract
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Santos, J. P., A. M. Costa, J. P. Marques, M. C. Martins, P. Indelicato, and F. Parente. "X-ray-spectroscopy analysis of electron-cyclotron-resonance ion-source plasmas." Physical Review A 82 (2010): 062516. AbstractWebsite
Analysis of x-ray spectra emitted by highly charged ions in an electron-cyclotron-resonance ion source (ECRIS) may be used as a tool to estimate the charge-state distribution (CSD) in the source plasma. For that purpose, knowledge of the electron energy distribution in the plasma, as well as the most important processes leading to the creation and de-excitation of ionic excited states are needed. In this work we present a method to estimate the ion CSD in an ECRIS through the analysis of the x-ray spectra emitted by the plasma. The method is applied to the analysis of a sulfur ECRIS plasma.
Santos, J. P., A. M. Costa, J. P. Marques, M. C. Martins, P. Indelicato, and F. Parente. "X-ray-spectroscopy analysis of electron-cyclotron-resonance ion-source plasmas." Physical Review A 82 (2010): 062516. AbstractWebsite

Analysis of x-ray spectra emitted by highly charged ions in an electron-cyclotron-resonance ion source (ECRIS) may be used as a tool to estimate the charge-state distribution (CSD) in the source plasma. For that purpose, knowledge of the electron energy distribution in the plasma, as well as the most important processes leading to the creation and de-excitation of ionic excited states are needed. In this work we present a method to estimate the ion CSD in an ECRIS through the analysis of the x-ray spectra emitted by the plasma. The method is applied to the analysis of a sulfur ECRIS plasma.

Santos, J. P., M. C. Martins, A. M. Costa, P. Indelicato, and F. Parente. "X-ray spectra emitted by Cl14+ ions in ECRIS plasmas." Vacuum 82 (2008): 1522-1524. AbstractWebsite
We study the contribution of the most important processes leading to the creation of excited states of Cl14+ ions from the ground configurations of Cl ions in an Electron Cyclotron Resonance Ion Source (ECRIS), which lead to the emission of K X-ray lines. Theoretical values for inner-shell excitation, K and KL ionization cross-sections, and energies and transition probabilities for the de-excitation processes are calculated in the framework of the Multi-Configuration Dirac-Fock (MCDF) method. With reasonable assumptions about the electron energy distribution, a theoretical K[alpha] X-ray spectrum is obtained, which reproduces closely a recent experimental result.
Santos, J. P., M. C. Martins, A. M. Costa, P. Indelicato, and F. Parente. "X-ray spectra emitted by Cl14+ ions in ECRIS plasmas." Vacuum 82 (2008): 1522-1524. AbstractWebsite

We study the contribution of the most important processes leading to the creation of excited states of Cl14+ ions from the ground configurations of Cl ions in an Electron Cyclotron Resonance Ion Source (ECRIS), which lead to the emission of K X-ray lines. Theoretical values for inner-shell excitation, K and KL ionization cross-sections, and energies and transition probabilities for the de-excitation processes are calculated in the framework of the Multi-Configuration Dirac-Fock (MCDF) method. With reasonable assumptions about the electron energy distribution, a theoretical K[alpha] X-ray spectrum is obtained, which reproduces closely a recent experimental result.

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Amaro, Pedro, Jose Paulo Santos, Ana Samouco, Ricardo Adão, Luís Souto Martins, Sebastian Weber, Stanislav Tashenov, Maria Luisa Carvalho, and Sofia Pessanha. "Validation of the Geant4 Monte Carlo package for X-ray fluorescence spectroscopy in triaxial geometry." Spectrochimica Acta Part B: Atomic Spectroscopy 130 (2017): 60-66. AbstractWebsite

Spectrochimica Acta Part B: Atomic Spectroscopy, 130 (2017) 60-66. doi:10.1016/j.sab.2017.02.012

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Manso, M., S. Pessanha, M. Guerra, J. L. Figueirinhas, J. P. Santos, and M. L. Carvalho. "Unveiling the Third Secret of Fátima: μ-XRF quantitative characterization and 2D elemental mapping." Spectrochimica Acta Part B: Atomic Spectroscopy 130 (2017): 35-38. AbstractWebsite

Spectrochimica Acta Part B: Atomic Spectroscopy, 130 (2017) 35-38. doi:10.1016/j.sab.2017.02.006

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Santos, J. P., M. C. Martins, A. M. Costa, P. Indelicato, and F. Parente. "Two-Electron One-Photon Transtion Relativistic Calculations for Low-Z Elements." Nuclear Instruments and Methods in Physics Research B 205 (2003): 102-105. Abstract

Energies of two-electron one-photon transitions from initial double K-hole states and the transition energies of competing processes, namely K hyper-satellites, were computed for low-Z elements, using the multi-configuration Dirac–Fock method. Transition rates are also evaluated.

Martins, M. C., J. P. Santos, A. M. Costa, and F. Parente. "Transition wavelengths and probabilities for spectral lines of Zr III." The European Physical Journal D 39 (2006): 167-172. AbstractWebsite
Wavelengths and oscillator strengths for all dipole-allowed fine-structure transitions in Zr III have been calculated within the Multi-Configuration Dirac-Fock method with QED corrections. These transitions are included in the spectrum of some chemically peculiar stars, like the B-type star Lupi observed by the Hubble space telescope. The results are compared to existing experimental and semi-empirical data.
Martins, M. C., J. P. Santos, A. M. Costa, and F. Parente. "Transition wavelengths and probabilities for spectral lines of Zr III." The European Physical Journal D 39 (2006): 167-172. AbstractWebsite

Wavelengths and oscillator strengths for all dipole-allowed fine-structure transitions in Zr III have been calculated within the Multi-Configuration Dirac-Fock method with QED corrections. These transitions are included in the spectrum of some chemically peculiar stars, like the B-type star Lupi observed by the Hubble space telescope. The results are compared to existing experimental and semi-empirical data. Corr

Santos, J. P., J. P. Marques, A. M. Costa, M. C. Martins, P. Indelicato, and F. Parente. "Transition probability values of the 1s 22s3p 3P 0level in Be-like ions." Physica Scripta T156 (2013): 014020. AbstractWebsite
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Santos, J. P., J. P. Marques, A. M. Costa, M. C. Martins, P. Indelicato, and F. Parente. "Transition probability values of the 1s 22s3p 3P 0level in Be-like ions." Physica Scripta T156 (2013): 014020. AbstractWebsite
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Santos, Jose Paulo, Maria Conceição Martins, Ana Maria Costa, José Pires Marques, Paul Indelicato, and Fernando Parente. "Theoretical determination of K X-ray transition energy and probability values for highly charged ions of lanthanum and cerium." The European Physical Journal D 68 (2014): 244. AbstractWebsite
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Santos, Jose Paulo, Maria Conceição Martins, Ana Maria Costa, José Pires Marques, Paul Indelicato, and Fernando Parente. "Theoretical determination of K X-ray transition energy and probability values for highly charged ions of lanthanum and cerium." The European Physical Journal D 68 (2014): 244. AbstractWebsite
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Marques, J. P., M. C. Martins, A. M. Costa, P. Indelicato, F. Parente, and J. P. Santos. "Theoretical determination of K X-ray transition energy and probability values for highly charged (He- through B-like) Nd, Sm, Gd, Dy, Er, and Yb ions." Radiat. Phys. Chem. 154 (2019): 17-20. Abstract

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Guerra, M., J. M. Sampaio, T. I. Madeira, F. Parente, P. Indelicato, J. P. Marques, J. P. Santos, J. Hoszowska, Cl J. Dousse, L. Loperetti, F. Zeeshan, M. Muller, R. Unterumsberger, and B. Beckhoff. "Theoretical and experimental determination of L-shell decay rates, line widths, and fluorescence yields in Ge." Physical Review A 92 (2015): 022507-9. AbstractWebsite
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Indelicato, P., G. C. Rodrigues, J. P. Santos, P. Patté, J. P. Marques, and F. Parente. "Systematic calculation of Total Atomic Binding Energies." Hyperfine Interactions 146-147 (2003): 115-119. Abstract
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Rahangdale, H. V., D. Mitra, M. Guerra, J. P. Santos, and S. Saha. "Subshell resolved inner shell ionization cross-sections of High Z elements by electron impact." Journal of Physics: Conference Series 635 (2015): 052001-2. AbstractWebsite
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Dyke, J. M., G. Levita, A. Morris, J. S. Ogden, A. A. Dias, M. Algarra, J. P. Santos, M. L. Costa, P. Rodrigues, and M. T. Barros. "A Study of the Thermal Decomposition of 2-Azidoacetamide by Ultraviolet Photoelectron Spectroscopy and Matrix-Isolation Infrared Spectroscopy:  Identification of the Imine Intermediate H2NCOCHNH." The Journal of Physical Chemistry A 108 (2004): 5299-5307. AbstractWebsite

The thermal decomposition of 2-azidoacetamide (N3CH2CONH2) has been studied by matrix-isolation infrared spectroscopy and real-time ultraviolet photoelectron spectroscopy. N2, CH2NH, HNCO, CO, NH3, and HCN are observed as high-temperature decomposition products, while at lower temperatures, the novel imine intermediate H2NCOCHNH is observed in the matrix-isolation IR experiments. The identity of this intermediate is confirmed both by ab initio molecular orbital calculations of its IR spectrum and by the temperature dependence and distribution of products in the photoelectron spectroscopy (PES) and IR studies. Mechanisms are proposed for the formation and decomposition of the intermediate consistent both with the observed results and with estimated activation energies based on pathway calculations.

Pinto, R. M., R. I. Olariu, J. Lameiras, F. T. Martins, A. A. Dias, G. J. Langley, P. Rodrigues, C. D. Maycock, J. P. Santos, M. F. Duarte, M. T. Fernandez, and M. L. Costa. "Study of selected benzyl azides by UV photoelectron spectroscopy and mass spectrometry." Journal of Molecular Structure 980 (2010): 163-171. AbstractWebsite
Benzyl azide and the three methylbenzyl azides were synthesized and characterized by mass spectrometry (MS) and ultraviolet photoelectron spectroscopy (UVPES). The electron ionization fragmentation mechanisms for benzyl azide and their methyl derivatives were studied by accurate mass measurements and linked scans at constant B/E. For benzyl azide, in order to clarify the fragmentation mechanism, labelling experiments were performed. From the mass analysis of methylbenzyl azides isomers it was possible to differentiate the isomers ortho, meta and para. The abundance and nature of the ions resulting from the molecular ion fragmentation, for the three distinct isomers of substituted benzyl azides, were rationalized in terms of the electronic properties of the substituent. Concerning the para-isomer, IRC calculations were performed at UHF/6-31G(d) level. The photoionization study of benzyl azide, with He(I) radiation, revealed five bands in the 8-21 eV ionization energies region. From every photoelectron spectrum of methylbenzyl azides isomers it has been identified seven bands, on the same range as the benzyl azide. Interpretation of the photoelectron spectra was accomplished applying Koopmans' theorem to the SCF orbital energies obtained at HF/6-311++G(d, p) level.